| Chain sequence(s) |
A: ASTKGPEVQLVESGGGLVQPGGSLRLSCAASLEHVAIGWFRQAPGKEREGVSCISSSGGHIHYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAAAVSYWECYDKLDYWGQGTLVTVSSPP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:38)
[INFO] Main: Simulation completed successfully. (00:01:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.0199 | |
| 2 | S | A | -0.2152 | |
| 3 | T | A | -0.4177 | |
| 4 | K | A | -1.7976 | |
| 5 | G | A | -0.8211 | |
| 6 | P | A | -0.6705 | |
| 7 | E | A | -1.8663 | |
| 8 | V | A | 0.0000 | |
| 9 | Q | A | -1.1983 | |
| 10 | L | A | 0.0000 | |
| 11 | V | A | 1.3740 | |
| 12 | E | A | 0.0337 | |
| 13 | S | A | -0.2467 | |
| 14 | G | A | -0.3472 | |
| 15 | G | A | -0.2648 | |
| 16 | G | A | 0.0711 | |
| 17 | L | A | 1.5125 | |
| 18 | V | A | 0.0000 | |
| 19 | Q | A | -1.2343 | |
| 20 | P | A | -0.4994 | |
| 21 | G | A | -0.5274 | |
| 22 | G | A | -0.1826 | |
| 23 | S | A | -0.1767 | |
| 24 | L | A | -0.1335 | |
| 25 | R | A | -1.8512 | |
| 26 | L | A | 0.0000 | |
| 27 | S | A | -0.0118 | |
| 28 | C | A | 0.0000 | |
| 29 | A | A | 0.0250 | |
| 30 | A | A | 0.0000 | |
| 31 | S | A | -0.1446 | |
| 32 | L | A | 0.0113 | |
| 33 | E | A | -1.8677 | |
| 34 | H | A | -0.9763 | |
| 35 | V | A | 0.0000 | |
| 36 | A | A | 0.0000 | |
| 37 | I | A | 0.0000 | |
| 38 | G | A | 0.0000 | |
| 39 | W | A | 0.0000 | |
| 40 | F | A | 0.3326 | |
| 41 | R | A | 0.0000 | |
| 42 | Q | A | -0.5301 | |
| 43 | A | A | -0.1110 | |
| 44 | P | A | -0.3373 | |
| 45 | G | A | -0.8144 | |
| 46 | K | A | -2.1215 | |
| 47 | E | A | -2.3146 | |
| 48 | R | A | -1.5599 | |
| 49 | E | A | -1.3459 | |
| 50 | G | A | -0.4238 | |
| 51 | V | A | 0.0000 | |
| 52 | S | A | 0.0000 | |
| 53 | C | A | 0.0000 | |
| 54 | I | A | 0.0000 | |
| 55 | S | A | 0.0000 | |
| 56 | S | A | 0.0000 | |
| 57 | S | A | -0.2405 | |
| 58 | G | A | -0.2747 | |
| 59 | G | A | -0.6724 | |
| 60 | H | A | -0.8149 | |
| 61 | I | A | 1.1369 | |
| 62 | H | A | -0.2074 | |
| 63 | Y | A | 0.1383 | |
| 64 | A | A | -0.2715 | |
| 65 | D | A | -1.8254 | |
| 66 | S | A | -0.5320 | |
| 67 | V | A | 0.0000 | |
| 68 | K | A | -1.7843 | |
| 69 | G | A | -0.8218 | |
| 70 | R | A | -0.3538 | |
| 71 | F | A | 0.0000 | |
| 72 | T | A | -0.0827 | |
| 73 | I | A | 0.0000 | |
| 74 | S | A | -0.1561 | |
| 75 | R | A | -0.3722 | |
| 76 | D | A | -0.7944 | |
| 77 | N | A | -1.4367 | |
| 78 | S | A | -0.7459 | |
| 79 | K | A | -1.7909 | |
| 80 | N | A | -0.7369 | |
| 81 | T | A | 0.0000 | |
| 82 | V | A | 0.0000 | |
| 83 | Y | A | 0.1453 | |
| 84 | L | A | 0.0000 | |
| 85 | Q | A | -0.6211 | |
| 86 | M | A | 0.0000 | |
| 87 | N | A | -0.5671 | |
| 88 | S | A | -0.2445 | |
| 89 | L | A | 0.0000 | |
| 90 | R | A | -1.2305 | |
| 91 | A | A | -0.4906 | |
| 92 | E | A | -1.8096 | |
| 93 | D | A | 0.0000 | |
| 94 | T | A | -0.0167 | |
| 95 | A | A | 0.0000 | |
| 96 | V | A | 0.7386 | |
| 97 | Y | A | 0.0000 | |
| 98 | Y | A | 0.1401 | |
| 99 | C | A | 0.0000 | |
| 100 | A | A | 0.0000 | |
| 101 | A | A | 0.0000 | |
| 102 | A | A | 0.0000 | |
| 103 | V | A | 1.4684 | |
| 104 | S | A | 0.2712 | |
| 105 | Y | A | 0.6966 | |
| 106 | W | A | 1.1373 | |
| 107 | E | A | -0.5414 | |
| 108 | C | A | 0.1850 | |
| 109 | Y | A | 1.1525 | |
| 110 | D | A | -1.0594 | |
| 111 | K | A | -1.8326 | |
| 112 | L | A | -0.3837 | |
| 113 | D | A | -1.6993 | |
| 114 | Y | A | 0.0078 | |
| 115 | W | A | 0.5300 | |
| 116 | G | A | -0.1862 | |
| 117 | Q | A | -1.2278 | |
| 118 | G | A | -0.2974 | |
| 119 | T | A | 0.2558 | |
| 120 | L | A | 1.6172 | |
| 121 | V | A | 0.0000 | |
| 122 | T | A | 0.1668 | |
| 123 | V | A | 0.0000 | |
| 124 | S | A | -0.1658 | |
| 125 | S | A | -0.2823 | |
| 126 | P | A | -0.3394 | |
| 127 | P | A | -0.3009 |