| Chain sequence(s) |
A: IVIVKGH
C: IVIVKGH B: IVIVKGH E: IVIVKGH D: IVIVKGH G: IVIVKGH F: IVIVKGH I: IVIVKGH H: IVIVKGH K: IVIVKGH J: IVIVKGH M: IVIVKGH L: IVIVKGH O: IVIVKGH N: IVIVKGH Q: IVIVKGH P: IVIVKGH S: IVIVKGH R: IVIVKGH T: IVIVKGH input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:26)
[INFO] Main: Simulation completed successfully. (00:04:31)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 2.5677 | |
| 2 | V | A | 0.0000 | |
| 3 | I | A | 1.0155 | |
| 4 | V | A | 0.0000 | |
| 5 | K | A | -1.8063 | |
| 6 | G | A | -1.8127 | |
| 7 | H | A | -2.3573 | |
| 1 | I | B | 2.6315 | |
| 2 | V | B | 0.0000 | |
| 3 | I | B | 1.0673 | |
| 4 | V | B | 0.0000 | |
| 5 | K | B | -2.0070 | |
| 6 | G | B | -2.0010 | |
| 7 | H | B | -2.4707 | |
| 1 | I | C | 2.8178 | |
| 2 | V | C | 2.2973 | |
| 3 | I | C | 1.1888 | |
| 4 | V | C | 0.0429 | |
| 5 | K | C | -1.9577 | |
| 6 | G | C | -1.7386 | |
| 7 | H | C | -2.1547 | |
| 1 | I | D | 3.6375 | |
| 2 | V | D | 4.0552 | |
| 3 | I | D | 3.0763 | |
| 4 | V | D | 1.9822 | |
| 5 | K | D | -1.0241 | |
| 6 | G | D | -1.7077 | |
| 7 | H | D | -2.1666 | |
| 1 | I | E | 2.8438 | |
| 2 | V | E | 3.6880 | |
| 3 | I | E | 0.0000 | |
| 4 | V | E | 1.8363 | |
| 5 | K | E | -0.2401 | |
| 6 | G | E | -1.5054 | |
| 7 | H | E | -2.4222 | |
| 1 | I | F | 2.2311 | |
| 2 | V | F | 2.6605 | |
| 3 | I | F | 0.0000 | |
| 4 | V | F | 1.8603 | |
| 5 | K | F | 0.0000 | |
| 6 | G | F | -1.0670 | |
| 7 | H | F | -2.1869 | |
| 1 | I | G | 2.0416 | |
| 2 | V | G | 2.5197 | |
| 3 | I | G | 0.0000 | |
| 4 | V | G | 1.7906 | |
| 5 | K | G | 0.0000 | |
| 6 | G | G | -0.9649 | |
| 7 | H | G | -2.1342 | |
| 1 | I | H | 2.0355 | |
| 2 | V | H | 2.5187 | |
| 3 | I | H | 0.0000 | |
| 4 | V | H | 1.7356 | |
| 5 | K | H | 0.0000 | |
| 6 | G | H | -1.0138 | |
| 7 | H | H | -2.1655 | |
| 1 | I | I | 2.0612 | |
| 2 | V | I | 2.5388 | |
| 3 | I | I | 0.0000 | |
| 4 | V | I | 1.6557 | |
| 5 | K | I | 0.1753 | |
| 6 | G | I | -1.0956 | |
| 7 | H | I | -2.1843 | |
| 1 | I | J | 2.0758 | |
| 2 | V | J | 2.5529 | |
| 3 | I | J | 0.0000 | |
| 4 | V | J | 1.5886 | |
| 5 | K | J | 0.0451 | |
| 6 | G | J | -1.1473 | |
| 7 | H | J | -2.1975 | |
| 1 | I | K | 2.0562 | |
| 2 | V | K | 2.5489 | |
| 3 | I | K | 0.0000 | |
| 4 | V | K | 1.5679 | |
| 5 | K | K | 0.0372 | |
| 6 | G | K | -1.1622 | |
| 7 | H | K | -2.1899 | |
| 1 | I | L | 2.3613 | |
| 2 | V | L | 2.6505 | |
| 3 | I | L | 0.0000 | |
| 4 | V | L | 1.7243 | |
| 5 | K | L | 0.0435 | |
| 6 | G | L | -1.1756 | |
| 7 | H | L | -2.1816 | |
| 1 | I | M | 2.7954 | |
| 2 | V | M | 3.4169 | |
| 3 | I | M | 0.0000 | |
| 4 | V | M | 1.8922 | |
| 5 | K | M | 0.1327 | |
| 6 | G | M | -1.2290 | |
| 7 | H | M | -2.2775 | |
| 1 | I | N | 3.4271 | |
| 2 | V | N | 3.9508 | |
| 3 | I | N | 2.8590 | |
| 4 | V | N | 2.0905 | |
| 5 | K | N | -0.2992 | |
| 6 | G | N | -1.2745 | |
| 7 | H | N | -2.0379 | |
| 1 | I | O | 3.2770 | |
| 2 | V | O | 0.0000 | |
| 3 | I | O | 2.2842 | |
| 4 | V | O | 0.0000 | |
| 5 | K | O | -2.0901 | |
| 6 | G | O | -1.7182 | |
| 7 | H | O | -2.1038 | |
| 1 | I | P | 3.8738 | |
| 2 | V | P | 0.0000 | |
| 3 | I | P | 1.6572 | |
| 4 | V | P | 0.0000 | |
| 5 | K | P | -1.9352 | |
| 6 | G | P | -2.1970 | |
| 7 | H | P | -2.5264 | |
| 1 | I | Q | 3.2489 | |
| 2 | V | Q | 0.0000 | |
| 3 | I | Q | 1.4056 | |
| 4 | V | Q | 0.0000 | |
| 5 | K | Q | -1.7046 | |
| 6 | G | Q | -1.7356 | |
| 7 | H | Q | -2.3772 | |
| 1 | I | R | 2.9748 | |
| 2 | V | R | 0.0000 | |
| 3 | I | R | 1.1519 | |
| 4 | V | R | 0.0000 | |
| 5 | K | R | -1.4362 | |
| 6 | G | R | -1.6664 | |
| 7 | H | R | -2.3302 | |
| 1 | I | S | 2.6025 | |
| 2 | V | S | 0.0000 | |
| 3 | I | S | 1.0886 | |
| 4 | V | S | 0.0000 | |
| 5 | K | S | -1.6764 | |
| 6 | G | S | -1.7527 | |
| 7 | H | S | -2.3395 | |
| 1 | I | T | 2.5650 | |
| 2 | V | T | 0.0000 | |
| 3 | I | T | 1.0338 | |
| 4 | V | T | 0.0000 | |
| 5 | K | T | -1.5764 | |
| 6 | G | T | -1.7629 | |
| 7 | H | T | -2.3665 |