| Chain sequence(s) |
A: AEAEAKAKAEAEAKAK
C: AEAEAKAKAEAEAKAK B: AEAEAKAKAEAEAKAK E: AEAEAKAKAEAEAKAK D: AEAEAKAKAEAEAKAK G: AEAEAKAKAEAEAKAK F: AEAEAKAKAEAEAKAK I: AEAEAKAKAEAEAKAK H: AEAEAKAKAEAEAKAK K: AEAEAKAKAEAEAKAK J: AEAEAKAKAEAEAKAK M: AEAEAKAKAEAEAKAK L: AEAEAKAKAEAEAKAK O: AEAEAKAKAEAEAKAK N: AEAEAKAKAEAEAKAK Q: AEAEAKAKAEAEAKAK P: AEAEAKAKAEAEAKAK S: AEAEAKAKAEAEAKAK R: AEAEAKAKAEAEAKAK T: AEAEAKAKAEAEAKAK input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:15:19)
[INFO] Main: Simulation completed successfully. (00:15:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -1.5563 | |
| 2 | E | A | -2.6580 | |
| 3 | A | A | -2.4969 | |
| 4 | E | A | -3.3509 | |
| 5 | A | A | -3.0224 | |
| 6 | K | A | -3.5839 | |
| 7 | A | A | -3.3693 | |
| 8 | K | A | -3.3623 | |
| 9 | A | A | -3.3297 | |
| 10 | E | A | -3.6795 | |
| 11 | A | A | -3.1384 | |
| 12 | E | A | -3.6919 | |
| 13 | A | A | 0.0000 | |
| 14 | K | A | -3.4040 | |
| 15 | A | A | -2.4278 | |
| 16 | K | A | -3.5056 | |
| 1 | A | B | -1.9978 | |
| 2 | E | B | -3.4673 | |
| 3 | A | B | -3.4298 | |
| 4 | E | B | -3.0544 | |
| 5 | A | B | -2.5027 | |
| 6 | K | B | -3.2853 | |
| 7 | A | B | -2.6324 | |
| 8 | K | B | -3.0916 | |
| 9 | A | B | -2.5419 | |
| 10 | E | B | -3.4053 | |
| 11 | A | B | -2.5615 | |
| 12 | E | B | -3.4436 | |
| 13 | A | B | -2.6551 | |
| 14 | K | B | -3.1689 | |
| 15 | A | B | -2.2705 | |
| 16 | K | B | -2.6045 | |
| 1 | A | C | -2.0910 | |
| 2 | E | C | -2.8888 | |
| 3 | A | C | -2.6315 | |
| 4 | E | C | -3.6979 | |
| 5 | A | C | -2.8451 | |
| 6 | K | C | -3.6364 | |
| 7 | A | C | -3.0109 | |
| 8 | K | C | -3.3071 | |
| 9 | A | C | -4.0648 | |
| 10 | E | C | -4.0957 | |
| 11 | A | C | -3.2250 | |
| 12 | E | C | -4.0816 | |
| 13 | A | C | -4.2466 | |
| 14 | K | C | -3.4294 | |
| 15 | A | C | -2.5164 | |
| 16 | K | C | -3.3271 | |
| 1 | A | D | -1.9196 | |
| 2 | E | D | -3.2202 | |
| 3 | A | D | -2.5560 | |
| 4 | E | D | -3.5393 | |
| 5 | A | D | -3.8114 | |
| 6 | K | D | -4.1552 | |
| 7 | A | D | -3.6750 | |
| 8 | K | D | -3.8071 | |
| 9 | A | D | -3.9468 | |
| 10 | E | D | -4.2839 | |
| 11 | A | D | -4.1588 | |
| 12 | E | D | -3.6658 | |
| 13 | A | D | -2.9782 | |
| 14 | K | D | -4.1496 | |
| 15 | A | D | -3.7753 | |
| 16 | K | D | -2.9325 | |
| 1 | A | E | -1.7634 | |
| 2 | E | E | -3.5321 | |
| 3 | A | E | -3.3211 | |
| 4 | E | E | -3.8957 | |
| 5 | A | E | -3.2724 | |
| 6 | K | E | -3.9508 | |
| 7 | A | E | -3.8826 | |
| 8 | K | E | -3.7717 | |
| 9 | A | E | -3.5129 | |
| 10 | E | E | -4.0110 | |
| 11 | A | E | -3.4631 | |
| 12 | E | E | -3.4172 | |
| 13 | A | E | -3.2718 | |
| 14 | K | E | -3.2801 | |
| 15 | A | E | -2.5241 | |
| 16 | K | E | -2.7363 | |
| 1 | A | F | -1.7673 | |
| 2 | E | F | -3.1811 | |
| 3 | A | F | -2.7987 | |
| 4 | E | F | -3.5898 | |
| 5 | A | F | -3.0645 | |
| 6 | K | F | -3.7299 | |
| 7 | A | F | -3.3424 | |
| 8 | K | F | -3.7769 | |
| 9 | A | F | -3.3928 | |
| 10 | E | F | -3.9890 | |
| 11 | A | F | -3.5401 | |
| 12 | E | F | -3.8838 | |
| 13 | A | F | -3.0864 | |
| 14 | K | F | -3.2333 | |
| 15 | A | F | -2.4594 | |
| 16 | K | F | -2.8549 | |
| 1 | A | G | -1.4224 | |
| 2 | E | G | -2.8415 | |
| 3 | A | G | -2.3186 | |
| 4 | E | G | -2.9705 | |
| 5 | A | G | -2.5300 | |
| 6 | K | G | -3.3191 | |
| 7 | A | G | -3.3890 | |
| 8 | K | G | -3.5199 | |
| 9 | A | G | -3.1762 | |
| 10 | E | G | -3.7505 | |
| 11 | A | G | -3.3415 | |
| 12 | E | G | -3.6886 | |
| 13 | A | G | -3.0004 | |
| 14 | K | G | -3.1922 | |
| 15 | A | G | -2.4420 | |
| 16 | K | G | -2.6402 | |
| 1 | A | H | -1.5012 | |
| 2 | E | H | -2.7817 | |
| 3 | A | H | -2.1521 | |
| 4 | E | H | -2.6269 | |
| 5 | A | H | 0.0000 | |
| 6 | K | H | -3.6084 | |
| 7 | A | H | -3.1169 | |
| 8 | K | H | -3.4411 | |
| 9 | A | H | -3.4055 | |
| 10 | E | H | -3.7145 | |
| 11 | A | H | -3.2679 | |
| 12 | E | H | -3.7438 | |
| 13 | A | H | -3.1033 | |
| 14 | K | H | -3.2529 | |
| 15 | A | H | -2.4880 | |
| 16 | K | H | -2.6744 | |
| 1 | A | I | -1.7629 | |
| 2 | E | I | -3.0174 | |
| 3 | A | I | -2.4405 | |
| 4 | E | I | -3.3527 | |
| 5 | A | I | -3.2944 | |
| 6 | K | I | -3.5337 | |
| 7 | A | I | -3.0703 | |
| 8 | K | I | -3.6441 | |
| 9 | A | I | -3.7578 | |
| 10 | E | I | -3.7225 | |
| 11 | A | I | -3.0098 | |
| 12 | E | I | -3.6378 | |
| 13 | A | I | -3.3940 | |
| 14 | K | I | -3.1532 | |
| 15 | A | I | -2.4128 | |
| 16 | K | I | -2.6770 | |
| 1 | A | J | -0.9354 | |
| 2 | E | J | -2.1763 | |
| 3 | A | J | -2.5259 | |
| 4 | E | J | -2.9321 | |
| 5 | A | J | -1.9210 | |
| 6 | K | J | -2.3471 | |
| 7 | A | J | 0.0000 | |
| 8 | K | J | -3.2434 | |
| 9 | A | J | -2.3405 | |
| 10 | E | J | -2.9249 | |
| 11 | A | J | -3.1542 | |
| 12 | E | J | -3.4963 | |
| 13 | A | J | -2.6064 | |
| 14 | K | J | -2.9411 | |
| 15 | A | J | -2.4925 | |
| 16 | K | J | -2.7529 | |
| 1 | A | K | -1.6896 | |
| 2 | E | K | -2.8539 | |
| 3 | A | K | -3.0891 | |
| 4 | E | K | -3.5971 | |
| 5 | A | K | -2.7069 | |
| 6 | K | K | -2.9359 | |
| 7 | A | K | 0.0000 | |
| 8 | K | K | -3.7562 | |
| 9 | A | K | -2.8313 | |
| 10 | E | K | -2.8991 | |
| 11 | A | K | 0.0000 | |
| 12 | E | K | -3.6686 | |
| 13 | A | K | -2.8774 | |
| 14 | K | K | -3.2753 | |
| 15 | A | K | -2.9291 | |
| 16 | K | K | -2.6905 | |
| 1 | A | L | -1.9517 | |
| 2 | E | L | -3.3801 | |
| 3 | A | L | -2.6617 | |
| 4 | E | L | -3.4657 | |
| 5 | A | L | -3.5156 | |
| 6 | K | L | -3.8097 | |
| 7 | A | L | 0.0000 | |
| 8 | K | L | -4.2732 | |
| 9 | A | L | -3.8759 | |
| 10 | E | L | -3.9474 | |
| 11 | A | L | 0.0000 | |
| 12 | E | L | -4.3686 | |
| 13 | A | L | -3.6921 | |
| 14 | K | L | -3.7236 | |
| 15 | A | L | -3.3559 | |
| 16 | K | L | -2.7902 | |
| 1 | A | M | -2.1235 | |
| 2 | E | M | -3.0771 | |
| 3 | A | M | -1.9820 | |
| 4 | E | M | -2.7255 | |
| 5 | A | M | -3.2314 | |
| 6 | K | M | -3.8663 | |
| 7 | A | M | -3.0823 | |
| 8 | K | M | -3.9646 | |
| 9 | A | M | 0.0000 | |
| 10 | E | M | -4.0102 | |
| 11 | A | M | -3.1237 | |
| 12 | E | M | -3.8277 | |
| 13 | A | M | -3.6193 | |
| 14 | K | M | -3.2424 | |
| 15 | A | M | -2.4011 | |
| 16 | K | M | -2.7806 | |
| 1 | A | N | -1.3995 | |
| 2 | E | N | -2.5833 | |
| 3 | A | N | -2.8425 | |
| 4 | E | N | -3.4635 | |
| 5 | A | N | -2.8153 | |
| 6 | K | N | -3.6660 | |
| 7 | A | N | 0.0000 | |
| 8 | K | N | -3.9151 | |
| 9 | A | N | -2.6789 | |
| 10 | E | N | -2.9192 | |
| 11 | A | N | 0.0000 | |
| 12 | E | N | -4.4955 | |
| 13 | A | N | -2.6799 | |
| 14 | K | N | -3.9788 | |
| 15 | A | N | -4.0152 | |
| 16 | K | N | -3.2190 | |
| 1 | A | O | -2.0604 | |
| 2 | E | O | -3.6917 | |
| 3 | A | O | -3.5883 | |
| 4 | E | O | -4.5272 | |
| 5 | A | O | 0.0000 | |
| 6 | K | O | -4.2697 | |
| 7 | A | O | 0.0000 | |
| 8 | K | O | -3.4271 | |
| 9 | A | O | 0.0000 | |
| 10 | E | O | -3.6279 | |
| 11 | A | O | -3.2506 | |
| 12 | E | O | -3.8863 | |
| 13 | A | O | 0.0000 | |
| 14 | K | O | -3.7503 | |
| 15 | A | O | -2.5180 | |
| 16 | K | O | -3.4229 | |
| 1 | A | P | -3.6167 | |
| 2 | E | P | -4.2857 | |
| 3 | A | P | -2.8975 | |
| 4 | E | P | -4.0723 | |
| 5 | A | P | 0.0000 | |
| 6 | K | P | -4.0314 | |
| 7 | A | P | -3.2274 | |
| 8 | K | P | -4.0600 | |
| 9 | A | P | -3.6505 | |
| 10 | E | P | -3.5950 | |
| 11 | A | P | -3.0371 | |
| 12 | E | P | -3.4156 | |
| 13 | A | P | -2.7438 | |
| 14 | K | P | -3.2202 | |
| 15 | A | P | -2.2904 | |
| 16 | K | P | -2.5384 | |
| 1 | A | Q | -1.1732 | |
| 2 | E | Q | -2.6080 | |
| 3 | A | Q | -2.0453 | |
| 4 | E | Q | -2.4463 | |
| 5 | A | Q | -2.5237 | |
| 6 | K | Q | -3.5543 | |
| 7 | A | Q | 0.0000 | |
| 8 | K | Q | -3.9226 | |
| 9 | A | Q | -3.3996 | |
| 10 | E | Q | -3.9373 | |
| 11 | A | Q | -4.0607 | |
| 12 | E | Q | -3.8173 | |
| 13 | A | Q | -2.8444 | |
| 14 | K | Q | -3.2881 | |
| 15 | A | Q | -2.7803 | |
| 16 | K | Q | -2.6997 | |
| 1 | A | R | -1.0701 | |
| 2 | E | R | -2.2538 | |
| 3 | A | R | -2.0757 | |
| 4 | E | R | -2.6465 | |
| 5 | A | R | -2.9361 | |
| 6 | K | R | -3.6931 | |
| 7 | A | R | 0.0000 | |
| 8 | K | R | -4.2759 | |
| 9 | A | R | 0.0000 | |
| 10 | E | R | -3.7394 | |
| 11 | A | R | 0.0000 | |
| 12 | E | R | -4.4774 | |
| 13 | A | R | -3.1450 | |
| 14 | K | R | -4.1603 | |
| 15 | A | R | -3.6986 | |
| 16 | K | R | -3.0118 | |
| 1 | A | S | -0.6793 | |
| 2 | E | S | -1.8081 | |
| 3 | A | S | -1.4914 | |
| 4 | E | S | -2.2369 | |
| 5 | A | S | -2.4337 | |
| 6 | K | S | -3.1805 | |
| 7 | A | S | 0.0000 | |
| 8 | K | S | -3.5391 | |
| 9 | A | S | 0.0000 | |
| 10 | E | S | -3.7935 | |
| 11 | A | S | -3.2238 | |
| 12 | E | S | -4.1860 | |
| 13 | A | S | 0.0000 | |
| 14 | K | S | -3.5968 | |
| 15 | A | S | -2.5045 | |
| 16 | K | S | -3.4084 | |
| 1 | A | T | -1.5057 | |
| 2 | E | T | -2.4934 | |
| 3 | A | T | -2.2072 | |
| 4 | E | T | -2.9907 | |
| 5 | A | T | -2.7849 | |
| 6 | K | T | -2.9096 | |
| 7 | A | T | -3.0702 | |
| 8 | K | T | -3.3479 | |
| 9 | A | T | -2.9043 | |
| 10 | E | T | -2.9829 | |
| 11 | A | T | 0.0000 | |
| 12 | E | T | -3.5204 | |
| 13 | A | T | -2.7422 | |
| 14 | K | T | -3.9234 | |
| 15 | A | T | -3.2810 | |
| 16 | K | T | -2.8084 |