| Chain sequence(s) |
A: GCCSNPVCHLEHSNLCGAGGAAG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:15)
[INFO] Main: Simulation completed successfully. (00:00:16)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.4154 | |
| 2 | C | A | 0.2196 | |
| 3 | C | A | 0.0000 | |
| 4 | S | A | -0.4850 | |
| 5 | N | A | -0.3226 | |
| 6 | P | A | 0.2107 | |
| 7 | V | A | 1.3310 | |
| 8 | C | A | 0.0000 | |
| 9 | H | A | -0.1457 | |
| 10 | L | A | 0.6251 | |
| 11 | E | A | -1.0319 | |
| 12 | H | A | -0.6227 | |
| 13 | S | A | -0.5631 | |
| 14 | N | A | -0.9917 | |
| 15 | L | A | 0.3704 | |
| 16 | C | A | 0.0000 | |
| 17 | G | A | -0.4472 | |
| 18 | A | A | -0.4463 | |
| 19 | G | A | -0.5422 | |
| 20 | G | A | -0.5389 | |
| 21 | A | A | -0.1567 | |
| 22 | A | A | -0.4569 | |
| 23 | G | A | -0.5192 |