| Chain sequence(s) |
A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFYIAYAEPRPDGEAILLQVPGSCRSYDLTGLKPGTEYSVLIHGVKGGLLSSPLTAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:35)
[INFO] Main: Simulation completed successfully. (00:00:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.3951 | |
| 2 | L | A | 0.7355 | |
| 3 | P | A | -0.1119 | |
| 4 | A | A | -0.3929 | |
| 5 | P | A | 0.0000 | |
| 6 | K | A | -2.0702 | |
| 7 | N | A | -1.4127 | |
| 8 | L | A | 0.1641 | |
| 9 | V | A | 1.3036 | |
| 10 | V | A | 0.8088 | |
| 11 | S | A | -0.4464 | |
| 12 | R | A | -1.8081 | |
| 13 | V | A | -0.6388 | |
| 14 | T | A | -1.5966 | |
| 15 | E | A | -2.9909 | |
| 16 | D | A | -2.7197 | |
| 17 | S | A | -1.9823 | |
| 18 | A | A | 0.0000 | |
| 19 | R | A | -1.1232 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.2230 | |
| 22 | W | A | 0.0000 | |
| 23 | T | A | -1.1730 | |
| 24 | A | A | -1.2933 | |
| 25 | P | A | -1.4086 | |
| 26 | D | A | -2.1393 | |
| 27 | A | A | -1.5070 | |
| 28 | A | A | -1.3156 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.5411 | |
| 31 | S | A | -1.4502 | |
| 32 | F | A | 0.0000 | |
| 33 | Y | A | 0.4522 | |
| 34 | I | A | 0.0000 | |
| 35 | A | A | 1.0423 | |
| 36 | Y | A | 0.0000 | |
| 37 | A | A | -0.6729 | |
| 38 | E | A | -2.0239 | |
| 39 | P | A | -1.9182 | |
| 40 | R | A | -3.2713 | |
| 41 | P | A | -2.4177 | |
| 42 | D | A | -3.1668 | |
| 43 | G | A | -2.6391 | |
| 44 | E | A | -2.1543 | |
| 45 | A | A | -0.0252 | |
| 46 | I | A | 1.7546 | |
| 47 | L | A | 2.0621 | |
| 48 | L | A | 1.0049 | |
| 49 | Q | A | -0.6027 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.9645 | |
| 52 | G | A | 0.0000 | |
| 53 | S | A | -1.0302 | |
| 54 | C | A | -0.3979 | |
| 55 | R | A | -0.6382 | |
| 56 | S | A | -0.3794 | |
| 57 | Y | A | -0.6688 | |
| 58 | D | A | -1.7118 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.3354 | |
| 61 | G | A | -1.5108 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -3.0459 | |
| 64 | P | A | -2.5009 | |
| 65 | G | A | -1.8630 | |
| 66 | T | A | -1.9274 | |
| 67 | E | A | -1.5626 | |
| 68 | Y | A | 0.0000 | |
| 69 | S | A | 0.2248 | |
| 70 | V | A | 0.0000 | |
| 71 | L | A | 1.0748 | |
| 72 | I | A | 0.0000 | |
| 73 | H | A | 0.1614 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | -0.6599 | |
| 76 | K | A | -1.6640 | |
| 77 | G | A | -1.2048 | |
| 78 | G | A | -0.5566 | |
| 79 | L | A | 0.7774 | |
| 80 | L | A | 1.2113 | |
| 81 | S | A | 0.0000 | |
| 82 | S | A | 0.4339 | |
| 83 | P | A | -0.0585 | |
| 84 | L | A | -0.2682 | |
| 85 | T | A | 0.4880 | |
| 86 | A | A | 1.3643 | |
| 87 | I | A | 1.9419 | |
| 88 | F | A | 0.0000 | |
| 89 | T | A | -0.6890 | |
| 90 | T | A | -1.7864 |