Chain sequence(s) |
A: MMISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLDKPVIMGRHTWESSIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKKAQKKLYLTHIDDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCCFEILERR
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 5 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | RA33A,MR20A,GR96A,FA137A,GA43A |
Energy difference between WT (input) and mutated protein (by FoldX) | 8.43788 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] FoldX: Building mutant model (00:03:07) [INFO] FoldX: Starting FoldX energy minimalization (00:03:55) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:53) [INFO] Main: Simulation completed successfully. (00:05:55) [INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:02:43) [INFO] FoldX: Starting FoldX energy minimalization (00:03:44) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:55) [INFO] Main: Simulation completed successfully. (00:04:56) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | M | A | 0.7532 | |
2 | I | A | 0.3507 | |
3 | S | A | 0.0000 | |
4 | L | A | 0.0000 | |
5 | I | A | 0.0000 | |
6 | A | A | 0.0000 | |
7 | A | A | 0.0000 | |
8 | L | A | 0.0000 | |
9 | A | A | 0.0000 | |
10 | V | A | 0.2206 | |
11 | D | A | -1.7826 | |
12 | R | A | -0.8286 | |
13 | V | A | 0.0000 | |
14 | I | A | 0.0000 | |
15 | G | A | 0.0000 | |
16 | M | A | -0.1637 | |
17 | E | A | -1.9245 | |
18 | N | A | -1.0853 | |
19 | A | A | -0.2896 | |
20 | R | A | -1.0770 | mutated: MR20A |
21 | P | A | -0.2389 | |
22 | W | A | -0.1228 | |
23 | N | A | -1.2506 | |
24 | L | A | 0.0000 | |
25 | P | A | -0.1333 | |
26 | A | A | -0.0110 | |
27 | D | A | 0.0000 | |
28 | L | A | 1.5882 | |
29 | A | A | 0.3695 | |
30 | W | A | 0.2503 | |
31 | F | A | 0.2431 | |
32 | K | A | -1.2288 | |
33 | A | A | -0.2093 | mutated: RA33A |
34 | N | A | -0.1715 | |
35 | T | A | 0.0000 | |
36 | L | A | 0.2568 | |
37 | D | A | -1.7479 | |
38 | K | A | -0.6681 | |
39 | P | A | 0.0000 | |
40 | V | A | 0.0000 | |
41 | I | A | 0.0000 | |
42 | M | A | 0.0000 | |
43 | A | A | -0.0788 | mutated: GA43A |
44 | R | A | -0.7410 | |
45 | H | A | -1.0924 | |
46 | T | A | 0.0000 | |
47 | W | A | 0.0000 | |
48 | E | A | -1.8836 | |
49 | S | A | -0.2863 | |
50 | I | A | 0.6038 | |
51 | G | A | -0.8633 | |
52 | R | A | -1.9361 | |
53 | P | A | -0.3306 | |
54 | L | A | 0.1696 | |
55 | P | A | -0.2996 | |
56 | G | A | -0.5501 | |
57 | R | A | -0.5236 | |
58 | K | A | -1.2946 | |
59 | N | A | 0.0000 | |
60 | I | A | 0.0000 | |
61 | I | A | 0.0000 | |
62 | L | A | 0.1581 | |
63 | S | A | -0.0310 | |
64 | S | A | -0.4370 | |
65 | Q | A | -1.2847 | |
66 | P | A | -0.5355 | |
67 | G | A | -0.3732 | |
68 | T | A | -0.1901 | |
69 | D | A | -0.6770 | |
70 | D | A | -2.1876 | |
71 | R | A | -2.1707 | |
72 | V | A | 0.0000 | |
73 | T | A | 0.0147 | |
74 | W | A | 0.1898 | |
75 | V | A | 0.0000 | |
76 | K | A | -1.7167 | |
77 | S | A | -0.3484 | |
78 | V | A | -0.0830 | |
79 | D | A | -1.8780 | |
80 | E | A | -1.0573 | |
81 | A | A | 0.0000 | |
82 | I | A | 0.5635 | |
83 | A | A | 0.0880 | |
84 | A | A | 0.0236 | |
85 | C | A | 0.0000 | |
86 | G | A | -0.7992 | |
87 | D | A | -1.7513 | |
88 | V | A | 0.2940 | |
89 | P | A | -0.1657 | |
90 | E | A | -0.2291 | |
91 | I | A | 0.0000 | |
92 | M | A | 0.0000 | |
93 | V | A | 0.0000 | |
94 | I | A | 0.0000 | |
95 | G | A | 0.0000 | |
96 | R | A | -0.2533 | mutated: GR96A |
97 | G | A | 0.0000 | |
98 | R | A | -1.8441 | |
99 | V | A | 0.0000 | |
100 | Y | A | 0.0000 | |
101 | E | A | -1.9079 | |
102 | Q | A | -0.8133 | |
103 | F | A | 0.0000 | |
104 | L | A | 0.1264 | |
105 | P | A | -0.4442 | |
106 | K | A | -1.2520 | |
107 | A | A | 0.0000 | |
108 | Q | A | -0.8499 | |
109 | K | A | -0.4950 | |
110 | L | A | 0.0000 | |
111 | Y | A | 0.0000 | |
112 | L | A | 0.0000 | |
113 | T | A | 0.0000 | |
114 | H | A | -0.3420 | |
115 | I | A | 0.0000 | |
116 | D | A | -1.7894 | |
117 | A | A | 0.0000 | |
118 | E | A | -1.7750 | |
119 | V | A | -0.4394 | |
120 | E | A | -1.8118 | |
121 | G | A | -0.8547 | |
122 | D | A | -1.8298 | |
123 | T | A | -0.4548 | |
124 | H | A | -0.6094 | |
125 | F | A | 0.0000 | |
126 | P | A | -0.3565 | |
127 | D | A | -1.7538 | |
128 | Y | A | -0.4340 | |
129 | E | A | -1.8262 | |
130 | P | A | -0.9037 | |
131 | D | A | -2.0196 | |
132 | D | A | -1.3288 | |
133 | W | A | 0.0000 | |
134 | E | A | -1.2481 | |
135 | S | A | -0.0909 | |
136 | V | A | 1.7419 | |
137 | A | A | 0.3077 | mutated: FA137A |
138 | S | A | -0.5766 | |
139 | E | A | -1.4746 | |
140 | F | A | 1.5744 | |
141 | H | A | -0.2807 | |
142 | D | A | -1.8424 | |
143 | A | A | -0.6567 | |
144 | D | A | -1.7710 | |
145 | A | A | -0.4853 | |
146 | Q | A | -1.1877 | |
147 | N | A | 0.0000 | |
148 | S | A | -0.2684 | |
149 | H | A | -0.3475 | |
150 | S | A | -0.3332 | |
151 | Y | A | 0.0000 | |
152 | C | A | 0.4090 | |
153 | F | A | 0.0000 | |
154 | E | A | -0.2244 | |
155 | I | A | 0.2313 | |
156 | L | A | 0.0000 | |
157 | E | A | -0.8310 | |
158 | R | A | -0.9913 | |
159 | R | A | -1.9401 |