| Chain sequence(s) |
A: MGSSHHHHHHHHHSSGENLYFQGGSVVSKDDPGCKKLQKDISKEHNNLPGSMKAIYVDDDAKKKSTLAVANIQEGNRGHSGVSATRVVAARKAQWGRKYSNYAKGKKVGEASSIRRCGDGPEGKPFEYKENSARPLQGHAEAKVIEEWFEKGGSNPQGTLLLNVSRPCCSECARLIRWANCGKNGAPDCNRIKVCENHQDKESLDSLRCEK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:48)
[INFO] Main: Simulation completed successfully. (00:06:49)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7400 | |
| 2 | G | A | -0.2542 | |
| 3 | S | A | -0.6886 | |
| 4 | S | A | -1.2373 | |
| 5 | H | A | -2.1455 | |
| 6 | H | A | -2.5089 | |
| 7 | H | A | -2.7406 | |
| 8 | H | A | -2.8658 | |
| 9 | H | A | -2.8684 | |
| 10 | H | A | -2.8705 | |
| 11 | H | A | -2.7718 | |
| 12 | H | A | -2.5240 | |
| 13 | H | A | -2.1952 | |
| 14 | S | A | -1.7108 | |
| 15 | S | A | -1.8220 | |
| 16 | G | A | -1.8391 | |
| 17 | E | A | -2.0533 | |
| 18 | N | A | -1.0219 | |
| 19 | L | A | 0.9770 | |
| 20 | Y | A | 1.2923 | |
| 21 | F | A | 0.9134 | |
| 22 | Q | A | -0.2500 | |
| 23 | G | A | -0.9788 | |
| 24 | G | A | -1.1177 | |
| 25 | S | A | 0.0000 | |
| 26 | V | A | -0.6564 | |
| 27 | V | A | -0.6929 | |
| 28 | S | A | -1.5809 | |
| 29 | K | A | -3.2878 | |
| 30 | D | A | -3.3612 | |
| 31 | D | A | -2.5523 | |
| 32 | P | A | -2.1649 | |
| 33 | G | A | -2.0119 | |
| 34 | C | A | 0.0000 | |
| 35 | K | A | -3.8317 | |
| 36 | K | A | -3.8022 | |
| 37 | L | A | 0.0000 | |
| 38 | Q | A | -3.0962 | |
| 39 | K | A | -3.7662 | |
| 40 | D | A | -3.4893 | |
| 41 | I | A | 0.0000 | |
| 42 | S | A | -2.5266 | |
| 43 | K | A | -3.4217 | |
| 44 | E | A | -2.4068 | |
| 45 | H | A | -2.2396 | |
| 46 | N | A | -2.6801 | |
| 47 | N | A | -2.2949 | |
| 48 | L | A | 0.0000 | |
| 49 | P | A | -0.9260 | |
| 50 | G | A | -1.0161 | |
| 51 | S | A | -0.5157 | |
| 52 | M | A | 0.0000 | |
| 53 | K | A | -0.5582 | |
| 54 | A | A | -0.0130 | |
| 55 | I | A | -0.1624 | |
| 56 | Y | A | 0.0691 | |
| 57 | V | A | 0.7310 | |
| 58 | D | A | -1.3239 | |
| 59 | D | A | -2.5508 | |
| 60 | D | A | -2.7283 | |
| 61 | A | A | -2.3198 | |
| 62 | K | A | -2.9198 | |
| 63 | K | A | -2.2508 | |
| 64 | K | A | -1.8542 | |
| 65 | S | A | 0.0000 | |
| 66 | T | A | 0.0000 | |
| 67 | L | A | 0.0000 | |
| 68 | A | A | 0.0000 | |
| 69 | V | A | 0.0000 | |
| 70 | A | A | 0.0000 | |
| 71 | N | A | -1.2121 | |
| 72 | I | A | -1.2603 | |
| 73 | Q | A | -2.5026 | |
| 74 | E | A | -2.9561 | |
| 75 | G | A | -2.5111 | |
| 76 | N | A | -2.9500 | |
| 77 | R | A | -3.4366 | |
| 78 | G | A | -2.5207 | |
| 79 | H | A | -1.7148 | |
| 80 | S | A | -0.9051 | |
| 81 | G | A | -1.1392 | |
| 82 | V | A | -0.3560 | |
| 83 | S | A | -0.4505 | |
| 84 | A | A | 0.0000 | |
| 85 | T | A | 0.0000 | |
| 86 | R | A | 0.0000 | |
| 87 | V | A | 0.2404 | |
| 88 | V | A | 0.0526 | |
| 89 | A | A | -0.5981 | |
| 90 | A | A | -1.0880 | |
| 91 | R | A | -2.7651 | |
| 92 | K | A | -2.8407 | |
| 93 | A | A | -1.5789 | |
| 94 | Q | A | -2.0148 | |
| 95 | W | A | -0.7094 | |
| 96 | G | A | -1.6855 | |
| 97 | R | A | -2.8723 | |
| 98 | K | A | -2.8439 | |
| 99 | Y | A | -1.7427 | |
| 100 | S | A | -1.8132 | |
| 101 | N | A | -1.9437 | |
| 102 | Y | A | -1.0091 | |
| 103 | A | A | 0.0000 | |
| 104 | K | A | -2.3090 | |
| 105 | G | A | -1.7261 | |
| 106 | K | A | -1.6749 | |
| 107 | K | A | -1.6571 | |
| 108 | V | A | 0.0778 | |
| 109 | G | A | -0.9401 | |
| 110 | E | A | -1.2871 | |
| 111 | A | A | -0.8312 | |
| 112 | S | A | 0.0000 | |
| 113 | S | A | -1.5517 | |
| 114 | I | A | 0.0000 | |
| 115 | R | A | -1.8983 | |
| 116 | R | A | -1.9298 | |
| 117 | C | A | 0.0000 | |
| 118 | G | A | -2.0547 | |
| 119 | D | A | -2.2003 | |
| 120 | G | A | -1.6724 | |
| 121 | P | A | -1.8476 | |
| 122 | E | A | -2.5952 | |
| 123 | G | A | 0.0000 | |
| 124 | K | A | -2.1413 | |
| 125 | P | A | -1.5859 | |
| 126 | F | A | 0.0000 | |
| 127 | E | A | -2.6947 | |
| 128 | Y | A | -2.2026 | |
| 129 | K | A | -3.4150 | |
| 130 | E | A | -3.3091 | |
| 131 | N | A | -2.7441 | |
| 132 | S | A | -1.8914 | |
| 133 | A | A | -1.4336 | |
| 134 | R | A | -1.7088 | |
| 135 | P | A | -1.2556 | |
| 136 | L | A | 0.0000 | |
| 137 | Q | A | -0.7765 | |
| 138 | G | A | -0.5241 | |
| 139 | H | A | 0.0000 | |
| 140 | A | A | 0.0000 | |
| 141 | E | A | 0.0000 | |
| 142 | A | A | 0.0000 | |
| 143 | K | A | -1.0534 | |
| 144 | V | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | E | A | 0.0000 | |
| 147 | E | A | -1.9734 | |
| 148 | W | A | 0.0000 | |
| 149 | F | A | 0.0000 | |
| 150 | E | A | -3.0681 | |
| 151 | K | A | -3.1066 | |
| 152 | G | A | -2.3432 | |
| 153 | G | A | -2.2195 | |
| 154 | S | A | -2.1104 | |
| 155 | N | A | -2.0558 | |
| 156 | P | A | 0.0000 | |
| 157 | Q | A | -2.0758 | |
| 158 | G | A | -2.0554 | |
| 159 | T | A | -1.0669 | |
| 160 | L | A | 0.0000 | |
| 161 | L | A | 0.0000 | |
| 162 | L | A | 0.0000 | |
| 163 | N | A | 0.0000 | |
| 164 | V | A | 0.0000 | |
| 165 | S | A | 0.0000 | |
| 166 | R | A | -0.6986 | |
| 167 | P | A | -1.2268 | |
| 168 | C | A | 0.0000 | |
| 169 | C | A | -0.3812 | |
| 170 | S | A | -0.5043 | |
| 171 | E | A | 0.0000 | |
| 172 | C | A | 0.0000 | |
| 173 | A | A | 0.0000 | |
| 174 | R | A | -0.5919 | |
| 175 | L | A | 0.0000 | |
| 176 | I | A | 0.0000 | |
| 177 | R | A | -1.0746 | |
| 178 | W | A | -0.9398 | |
| 179 | A | A | 0.0000 | |
| 180 | N | A | 0.0000 | |
| 181 | C | A | 0.0000 | |
| 182 | G | A | -2.4774 | |
| 183 | K | A | -3.0235 | |
| 184 | N | A | -3.0142 | |
| 185 | G | A | -2.9611 | |
| 186 | A | A | -2.4847 | |
| 187 | P | A | -2.4299 | |
| 188 | D | A | -2.4007 | |
| 189 | C | A | -1.2285 | |
| 190 | N | A | -1.1006 | |
| 191 | R | A | -1.0304 | |
| 192 | I | A | 0.0000 | |
| 193 | K | A | -0.3619 | |
| 194 | V | A | 0.0000 | |
| 195 | C | A | 0.0000 | |
| 196 | E | A | -1.5043 | |
| 197 | N | A | -1.6906 | |
| 198 | H | A | -1.3289 | |
| 199 | Q | A | -2.0770 | |
| 200 | D | A | -2.8639 | |
| 201 | K | A | -3.5925 | |
| 202 | E | A | -3.5959 | |
| 203 | S | A | 0.0000 | |
| 204 | L | A | 0.0000 | |
| 205 | D | A | -3.6039 | |
| 206 | S | A | -2.4704 | |
| 207 | L | A | 0.0000 | |
| 208 | R | A | -2.9440 | |
| 209 | C | A | -3.0501 | |
| 210 | E | A | -3.6677 | |
| 211 | K | A | -3.0254 |