Project name: RANDOM

Status: done

Started: 2026-02-11 18:04:40
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Chain sequence(s) A: MGSSHHHHHHHHHSSGENLYFQGGSVVSKDDPGCKKLQKDISKEHNNLPGSMKAIYVDDDAKKKSTLAVANIQEGNRGHSGVSATRVVAARKAQWGRKYSNYAKGKKVGEASSIRRCGDGPEGKPFEYKENSARPLQGHAEAKVIEEWFEKGGSNPQGTLLLNVSRPCCSECARLIRWANCGKNGAPDCNRIKVCENHQDKESLDSLRCEK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:06:48)
[INFO]       Main:     Simulation completed successfully.                                          (00:06:49)
Show buried residues

Minimal score value
-3.8317
Maximal score value
1.2923
Average score
-1.3655
Total score value
-288.1253

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.7400
2 G A -0.2542
3 S A -0.6886
4 S A -1.2373
5 H A -2.1455
6 H A -2.5089
7 H A -2.7406
8 H A -2.8658
9 H A -2.8684
10 H A -2.8705
11 H A -2.7718
12 H A -2.5240
13 H A -2.1952
14 S A -1.7108
15 S A -1.8220
16 G A -1.8391
17 E A -2.0533
18 N A -1.0219
19 L A 0.9770
20 Y A 1.2923
21 F A 0.9134
22 Q A -0.2500
23 G A -0.9788
24 G A -1.1177
25 S A 0.0000
26 V A -0.6564
27 V A -0.6929
28 S A -1.5809
29 K A -3.2878
30 D A -3.3612
31 D A -2.5523
32 P A -2.1649
33 G A -2.0119
34 C A 0.0000
35 K A -3.8317
36 K A -3.8022
37 L A 0.0000
38 Q A -3.0962
39 K A -3.7662
40 D A -3.4893
41 I A 0.0000
42 S A -2.5266
43 K A -3.4217
44 E A -2.4068
45 H A -2.2396
46 N A -2.6801
47 N A -2.2949
48 L A 0.0000
49 P A -0.9260
50 G A -1.0161
51 S A -0.5157
52 M A 0.0000
53 K A -0.5582
54 A A -0.0130
55 I A -0.1624
56 Y A 0.0691
57 V A 0.7310
58 D A -1.3239
59 D A -2.5508
60 D A -2.7283
61 A A -2.3198
62 K A -2.9198
63 K A -2.2508
64 K A -1.8542
65 S A 0.0000
66 T A 0.0000
67 L A 0.0000
68 A A 0.0000
69 V A 0.0000
70 A A 0.0000
71 N A -1.2121
72 I A -1.2603
73 Q A -2.5026
74 E A -2.9561
75 G A -2.5111
76 N A -2.9500
77 R A -3.4366
78 G A -2.5207
79 H A -1.7148
80 S A -0.9051
81 G A -1.1392
82 V A -0.3560
83 S A -0.4505
84 A A 0.0000
85 T A 0.0000
86 R A 0.0000
87 V A 0.2404
88 V A 0.0526
89 A A -0.5981
90 A A -1.0880
91 R A -2.7651
92 K A -2.8407
93 A A -1.5789
94 Q A -2.0148
95 W A -0.7094
96 G A -1.6855
97 R A -2.8723
98 K A -2.8439
99 Y A -1.7427
100 S A -1.8132
101 N A -1.9437
102 Y A -1.0091
103 A A 0.0000
104 K A -2.3090
105 G A -1.7261
106 K A -1.6749
107 K A -1.6571
108 V A 0.0778
109 G A -0.9401
110 E A -1.2871
111 A A -0.8312
112 S A 0.0000
113 S A -1.5517
114 I A 0.0000
115 R A -1.8983
116 R A -1.9298
117 C A 0.0000
118 G A -2.0547
119 D A -2.2003
120 G A -1.6724
121 P A -1.8476
122 E A -2.5952
123 G A 0.0000
124 K A -2.1413
125 P A -1.5859
126 F A 0.0000
127 E A -2.6947
128 Y A -2.2026
129 K A -3.4150
130 E A -3.3091
131 N A -2.7441
132 S A -1.8914
133 A A -1.4336
134 R A -1.7088
135 P A -1.2556
136 L A 0.0000
137 Q A -0.7765
138 G A -0.5241
139 H A 0.0000
140 A A 0.0000
141 E A 0.0000
142 A A 0.0000
143 K A -1.0534
144 V A 0.0000
145 I A 0.0000
146 E A 0.0000
147 E A -1.9734
148 W A 0.0000
149 F A 0.0000
150 E A -3.0681
151 K A -3.1066
152 G A -2.3432
153 G A -2.2195
154 S A -2.1104
155 N A -2.0558
156 P A 0.0000
157 Q A -2.0758
158 G A -2.0554
159 T A -1.0669
160 L A 0.0000
161 L A 0.0000
162 L A 0.0000
163 N A 0.0000
164 V A 0.0000
165 S A 0.0000
166 R A -0.6986
167 P A -1.2268
168 C A 0.0000
169 C A -0.3812
170 S A -0.5043
171 E A 0.0000
172 C A 0.0000
173 A A 0.0000
174 R A -0.5919
175 L A 0.0000
176 I A 0.0000
177 R A -1.0746
178 W A -0.9398
179 A A 0.0000
180 N A 0.0000
181 C A 0.0000
182 G A -2.4774
183 K A -3.0235
184 N A -3.0142
185 G A -2.9611
186 A A -2.4847
187 P A -2.4299
188 D A -2.4007
189 C A -1.2285
190 N A -1.1006
191 R A -1.0304
192 I A 0.0000
193 K A -0.3619
194 V A 0.0000
195 C A 0.0000
196 E A -1.5043
197 N A -1.6906
198 H A -1.3289
199 Q A -2.0770
200 D A -2.8639
201 K A -3.5925
202 E A -3.5959
203 S A 0.0000
204 L A 0.0000
205 D A -3.6039
206 S A -2.4704
207 L A 0.0000
208 R A -2.9440
209 C A -3.0501
210 E A -3.6677
211 K A -3.0254
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Laboratory of Theory of Biopolymers 2018