| Chain sequence(s) |
A: MGSSHHHHHHSSGENLYFQGAMAIAMLVPNKTQVVPKSGGEGKVKDIFASPALVRAGGVMIAFVEGRTKNKLFPEVIDLSSSDIVAGYIKAPETWQSLVAEVTKEYWQAHTVLESANNSNHRVGVARLPTGITRGNKVFLLVGSYEERREIDDYIWKAEAWNIKVIEGEATQSTEVQPTQPINWSEPKPLFQTDSPNNKGDLKEFLGGGGSGIVMGNGTLVFPLTAKDESNKVFSLITYSTDDGQKWEIPGGVSSVACRSPRVTEWEEGTLLMVTYCEDGRKVFESRDMGKTWTEARGTLPGVWLKSGPELPEVSLRVDALITATIEGRKVMLYTQKVRHFLEVDEPNALHLWVTDNNRTFHLGPFSVDSAENKTFANTLLYSDDALHLLQAKGDHESTAVSLAR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:11)
[INFO] Main: Simulation completed successfully. (00:06:14)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| 1 | M | A | 0.7654 | |
| 2 | G | A | -0.1909 | |
| 3 | S | A | -0.7127 | |
| 4 | S | A | -1.2747 | |
| 5 | H | A | -2.0653 | |
| 6 | H | A | -2.3649 | |
| 7 | H | A | -2.5915 | |
| 8 | H | A | -2.6230 | |
| 9 | H | A | -2.3998 | |
| 10 | H | A | -2.1219 | |
| 11 | S | A | -1.6860 | |
| 12 | S | A | -1.7931 | |
| 13 | G | A | -1.7395 | |
| 14 | E | A | -2.1195 | |
| 15 | N | A | -1.1686 | |
| 16 | L | A | 0.7741 | |
| 17 | Y | A | 1.4119 | |
| 18 | F | A | 1.2889 | |
| 19 | Q | A | -0.1785 | |
| 20 | G | A | -0.4203 | |
| 21 | A | A | -0.0983 | |
| 22 | M | A | 0.5205 | |
| 23 | A | A | 0.3927 | |
| 24 | I | A | 0.4607 | |
| 25 | A | A | 0.3273 | |
| 26 | M | A | 0.0000 | |
| 27 | L | A | 0.0000 | |
| 28 | V | A | -0.2477 | |
| 29 | P | A | -1.1705 | |
| 30 | N | A | -2.1326 | |
| 31 | K | A | -2.3370 | |
| 32 | T | A | 0.0000 | |
| 33 | Q | A | -1.7840 | |
| 34 | V | A | 0.0000 | |
| 35 | V | A | -1.4720 | |
| 36 | P | A | -1.7719 | |
| 37 | K | A | -1.5232 | |
| 38 | S | A | -1.2999 | |
| 39 | G | A | -1.4328 | |
| 40 | G | A | -1.9714 | |
| 41 | E | A | -2.7198 | |
| 42 | G | A | -2.2660 | |
| 43 | K | A | -2.5095 | |
| 44 | V | A | -1.1433 | |
| 45 | K | A | 0.0000 | |
| 46 | D | A | -1.4207 | |
| 47 | I | A | 0.0000 | |
| 48 | F | A | 0.0000 | |
| 49 | A | A | -0.1078 | |
| 50 | S | A | 0.0095 | |
| 51 | P | A | 0.0000 | |
| 52 | A | A | 0.0000 | |
| 53 | L | A | 0.0000 | |
| 54 | V | A | 0.0000 | |
| 55 | R | A | -1.0548 | |
| 56 | A | A | 0.0000 | |
| 57 | G | A | -1.4254 | |
| 58 | G | A | -1.0437 | |
| 59 | V | A | 0.0000 | |
| 60 | M | A | 0.0000 | |
| 61 | I | A | 0.0000 | |
| 62 | A | A | 0.0000 | |
| 63 | F | A | 0.0000 | |
| 64 | V | A | 0.0000 | |
| 65 | E | A | 0.0000 | |
| 66 | G | A | 0.0000 | |
| 67 | R | A | -0.7396 | |
| 68 | T | A | -1.1821 | |
| 69 | K | A | -1.5411 | |
| 70 | N | A | -1.5972 | |
| 71 | K | A | -1.9008 | |
| 72 | L | A | -0.7026 | |
| 73 | F | A | 0.0000 | |
| 74 | P | A | -1.2170 | |
| 75 | E | A | -1.3962 | |
| 76 | V | A | 0.1981 | |
| 77 | I | A | 0.4339 | |
| 78 | D | A | -1.5980 | |
| 79 | L | A | 0.0000 | |
| 80 | S | A | -1.0606 | |
| 81 | S | A | 0.0000 | |
| 82 | S | A | 0.0000 | |
| 83 | D | A | -0.9426 | |
| 84 | I | A | 0.0000 | |
| 85 | V | A | 0.0000 | |
| 86 | A | A | 0.0000 | |
| 87 | G | A | 0.0000 | |
| 88 | Y | A | 0.0000 | |
| 89 | I | A | 0.0000 | |
| 90 | K | A | -1.3037 | |
| 91 | A | A | -1.0972 | |
| 92 | P | A | -1.4038 | |
| 93 | E | A | -2.3850 | |
| 94 | T | A | -1.4455 | |
| 95 | W | A | -1.0392 | |
| 96 | Q | A | -1.4328 | |
| 97 | S | A | -1.2267 | |
| 98 | L | A | 0.0000 | |
| 99 | V | A | -0.2306 | |
| 100 | A | A | -0.6971 | |
| 101 | E | A | -1.1355 | |
| 102 | V | A | 0.0000 | |
| 103 | T | A | -0.8494 | |
| 104 | K | A | -1.5447 | |
| 105 | E | A | -1.7267 | |
| 106 | Y | A | -0.1203 | |
| 107 | W | A | -0.5985 | |
| 108 | Q | A | -0.9351 | |
| 109 | A | A | 0.0000 | |
| 110 | H | A | -0.8452 | |
| 111 | T | A | 0.0000 | |
| 112 | V | A | 0.0000 | |
| 113 | L | A | 0.0000 | |
| 114 | E | A | -1.8727 | |
| 115 | S | A | -1.3682 | |
| 116 | A | A | -1.4675 | |
| 117 | N | A | -2.4494 | |
| 118 | N | A | -2.7240 | |
| 119 | S | A | -2.2874 | |
| 120 | N | A | -2.4020 | |
| 121 | H | A | -1.8620 | |
| 122 | R | A | -2.8687 | |
| 123 | V | A | 0.0000 | |
| 124 | G | A | 0.0000 | |
| 125 | V | A | 0.0000 | |
| 126 | A | A | 0.0000 | |
| 127 | R | A | -0.5006 | |
| 128 | L | A | -0.0275 | |
| 129 | P | A | 0.0000 | |
| 130 | T | A | 0.0000 | |
| 131 | G | A | 0.0000 | |
| 132 | I | A | 0.0000 | |
| 133 | T | A | -1.1339 | |
| 134 | R | A | -1.9176 | |
| 135 | G | A | -1.7418 | |
| 136 | N | A | -2.0870 | |
| 137 | K | A | -2.6280 | |
| 138 | V | A | 0.0000 | |
| 139 | F | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | L | A | 0.0000 | |
| 142 | V | A | 0.0000 | |
| 143 | G | A | 0.0000 | |
| 144 | S | A | -0.6800 | |
| 145 | Y | A | -0.7663 | |
| 146 | E | A | -1.5565 | |
| 147 | E | A | -1.7361 | |
| 148 | R | A | -1.7732 | |
| 149 | R | A | -1.1777 | |
| 150 | E | A | -0.7959 | |
| 151 | I | A | 0.6595 | |
| 152 | D | A | -1.3920 | |
| 153 | D | A | -1.3021 | |
| 154 | Y | A | 0.4925 | |
| 155 | I | A | 0.5063 | |
| 156 | W | A | -0.4111 | |
| 157 | K | A | -1.4265 | |
| 158 | A | A | -1.1206 | |
| 159 | E | A | -1.1385 | |
| 160 | A | A | -0.6925 | |
| 161 | W | A | -0.7976 | |
| 162 | N | A | -1.4306 | |
| 163 | I | A | 0.0000 | |
| 164 | K | A | -0.9939 | |
| 165 | V | A | 0.0000 | |
| 166 | I | A | 0.0000 | |
| 167 | E | A | -1.6135 | |
| 168 | G | A | 0.0000 | |
| 169 | E | A | -2.5659 | |
| 170 | A | A | 0.0000 | |
| 171 | T | A | -1.6985 | |
| 172 | Q | A | -1.7557 | |
| 173 | S | A | -1.2723 | |
| 174 | T | A | -1.0195 | |
| 175 | E | A | -1.6346 | |
| 176 | V | A | 0.2869 | |
| 177 | Q | A | -1.0822 | |
| 178 | P | A | -1.1800 | |
| 179 | T | A | -0.6450 | |
| 180 | Q | A | -0.8760 | |
| 181 | P | A | 0.0000 | |
| 182 | I | A | 0.0000 | |
| 183 | N | A | -1.8878 | |
| 184 | W | A | -1.6561 | |
| 185 | S | A | -1.6699 | |
| 186 | E | A | -2.1276 | |
| 187 | P | A | -1.3703 | |
| 188 | K | A | -1.3650 | |
| 189 | P | A | -1.0812 | |
| 190 | L | A | 0.0000 | |
| 191 | F | A | -1.3309 | |
| 192 | Q | A | -2.1008 | |
| 193 | T | A | -1.5928 | |
| 194 | D | A | -2.4808 | |
| 195 | S | A | -2.2964 | |
| 196 | P | A | -2.3972 | |
| 197 | N | A | -3.4643 | |
| 198 | N | A | -3.2170 | |
| 199 | K | A | -3.3763 | |
| 200 | G | A | -3.0862 | |
| 201 | D | A | -3.6388 | |
| 202 | L | A | -2.6314 | |
| 203 | K | A | -2.4366 | |
| 204 | E | A | -1.4514 | |
| 205 | F | A | 0.0000 | |
| 206 | L | A | 0.0000 | |
| 207 | G | A | 0.0000 | |
| 208 | G | A | 0.0000 | |
| 209 | G | A | 0.0000 | |
| 210 | G | A | 0.0000 | |
| 211 | S | A | 0.1462 | |
| 212 | G | A | 0.0000 | |
| 213 | I | A | 0.3995 | |
| 214 | V | A | 0.2907 | |
| 215 | M | A | 0.0000 | |
| 216 | G | A | -1.6277 | |
| 217 | N | A | -1.7784 | |
| 218 | G | A | -1.1456 | |
| 219 | T | A | 0.0000 | |
| 220 | L | A | 0.0000 | |
| 221 | V | A | 0.0000 | |
| 222 | F | A | 0.0000 | |
| 223 | P | A | 0.0000 | |
| 224 | L | A | 0.0000 | |
| 225 | T | A | 0.0000 | |
| 226 | A | A | 0.0000 | |
| 227 | K | A | -1.9652 | |
| 228 | D | A | -2.8243 | |
| 229 | E | A | -3.5023 | |
| 230 | S | A | -2.3817 | |
| 231 | N | A | -2.9274 | |
| 232 | K | A | -1.9280 | |
| 233 | V | A | -0.8759 | |
| 234 | F | A | 0.0766 | |
| 235 | S | A | 0.0000 | |
| 236 | L | A | 0.0000 | |
| 237 | I | A | 0.0000 | |
| 238 | T | A | 0.0000 | |
| 239 | Y | A | -0.6351 | |
| 240 | S | A | 0.0000 | |
| 241 | T | A | -1.5928 | |
| 242 | D | A | -1.9512 | |
| 243 | D | A | -2.4643 | |
| 244 | G | A | 0.0000 | |
| 245 | Q | A | -2.5885 | |
| 246 | K | A | -3.0620 | |
| 247 | W | A | -2.0512 | |
| 248 | E | A | -2.0446 | |
| 249 | I | A | -1.0227 | |
| 250 | P | A | 0.0000 | |
| 251 | G | A | -1.7965 | |
| 252 | G | A | -0.8250 | |
| 253 | V | A | 0.5020 | |
| 254 | S | A | 0.0000 | |
| 255 | S | A | 0.1557 | |
| 256 | V | A | 0.6529 | |
| 257 | A | A | -0.6924 | |
| 258 | C | A | 0.0000 | |
| 259 | R | A | -1.0732 | |
| 260 | S | A | -0.5598 | |
| 261 | P | A | 0.0000 | |
| 262 | R | A | -0.2778 | |
| 263 | V | A | 0.0000 | |
| 264 | T | A | 0.0000 | |
| 265 | E | A | -0.9929 | |
| 266 | W | A | -1.5888 | |
| 267 | E | A | -3.0690 | |
| 268 | E | A | -3.2908 | |
| 269 | G | A | -2.3471 | |
| 270 | T | A | -2.0037 | |
| 271 | L | A | 0.0000 | |
| 272 | L | A | 0.0000 | |
| 273 | M | A | 0.0000 | |
| 274 | V | A | 0.0000 | |
| 275 | T | A | 0.0000 | |
| 276 | Y | A | -1.3230 | |
| 277 | C | A | 0.0000 | |
| 278 | E | A | -3.1632 | |
| 279 | D | A | -3.2118 | |
| 280 | G | A | 0.0000 | |
| 281 | R | A | 0.0000 | |
| 282 | K | A | -1.6928 | |
| 283 | V | A | 0.0000 | |
| 284 | F | A | 0.0000 | |
| 285 | E | A | -1.4572 | |
| 286 | S | A | 0.0000 | |
| 287 | R | A | -2.3813 | |
| 288 | D | A | -1.5953 | |
| 289 | M | A | -0.9407 | |
| 290 | G | A | 0.0000 | |
| 291 | K | A | -1.9840 | |
| 292 | T | A | -1.1740 | |
| 293 | W | A | -1.0211 | |
| 294 | T | A | -1.3829 | |
| 295 | E | A | -2.6037 | |
| 296 | A | A | -2.1244 | |
| 297 | R | A | -2.7124 | |
| 298 | G | A | -1.8467 | |
| 299 | T | A | -1.5212 | |
| 300 | L | A | 0.0000 | |
| 301 | P | A | -1.1341 | |
| 302 | G | A | -0.3495 | |
| 303 | V | A | 0.0000 | |
| 304 | W | A | -0.6267 | |
| 305 | L | A | -0.8857 | |
| 306 | K | A | -2.3732 | |
| 307 | S | A | -2.4262 | |
| 308 | G | A | -1.7617 | |
| 309 | P | A | -1.3948 | |
| 310 | E | A | -2.1873 | |
| 311 | L | A | -1.5985 | |
| 312 | P | A | -1.4045 | |
| 313 | E | A | -2.1218 | |
| 314 | V | A | -0.4216 | |
| 315 | S | A | -0.5445 | |
| 316 | L | A | 0.0000 | |
| 317 | R | A | -0.5459 | |
| 318 | V | A | 0.0000 | |
| 319 | D | A | 0.0000 | |
| 320 | A | A | 0.0000 | |
| 321 | L | A | 0.0000 | |
| 322 | I | A | 0.2888 | |
| 323 | T | A | -0.0450 | |
| 324 | A | A | -0.8287 | |
| 325 | T | A | -1.7171 | |
| 326 | I | A | -1.8488 | |
| 327 | E | A | -2.7948 | |
| 328 | G | A | -2.3904 | |
| 329 | R | A | -3.0577 | |
| 330 | K | A | -2.4986 | |
| 331 | V | A | 0.0000 | |
| 332 | M | A | 0.0000 | |
| 333 | L | A | 0.0000 | |
| 334 | Y | A | 0.0000 | |
| 335 | T | A | 0.0000 | |
| 336 | Q | A | 0.0000 | |
| 337 | K | A | 0.0000 | |
| 338 | V | A | 0.3162 | |
| 339 | R | A | -0.1825 | |
| 340 | H | A | 0.2110 | |
| 341 | F | A | 1.8932 | |
| 342 | L | A | 1.4363 | |
| 343 | E | A | -0.6753 | |
| 344 | V | A | 0.4914 | |
| 345 | D | A | -1.6581 | |
| 346 | E | A | -1.3286 | |
| 347 | P | A | -0.9171 | |
| 348 | N | A | -0.3731 | |
| 349 | A | A | 0.0000 | |
| 350 | L | A | 0.0000 | |
| 351 | H | A | 0.0000 | |
| 352 | L | A | 0.0000 | |
| 353 | W | A | 0.1097 | |
| 354 | V | A | 0.0000 | |
| 355 | T | A | 0.0000 | |
| 356 | D | A | -1.9143 | |
| 357 | N | A | -2.0113 | |
| 358 | N | A | -2.5968 | |
| 359 | R | A | -2.5258 | |
| 360 | T | A | -1.1154 | |
| 361 | F | A | 0.1349 | |
| 362 | H | A | -0.1745 | |
| 363 | L | A | 0.6301 | |
| 364 | G | A | 0.7195 | |
| 365 | P | A | 0.7315 | |
| 366 | F | A | 0.8758 | |
| 367 | S | A | 0.6050 | |
| 368 | V | A | 1.1344 | |
| 369 | D | A | 0.0000 | |
| 370 | S | A | -1.1611 | |
| 371 | A | A | -1.4695 | |
| 372 | E | A | -2.9010 | |
| 373 | N | A | -2.4723 | |
| 374 | K | A | -1.6982 | |
| 375 | T | A | 0.0000 | |
| 376 | F | A | -0.2551 | |
| 377 | A | A | 0.0405 | |
| 378 | N | A | 0.0000 | |
| 379 | T | A | 0.0000 | |
| 380 | L | A | 0.0000 | |
| 381 | L | A | -0.0069 | |
| 382 | Y | A | -0.4491 | |
| 383 | S | A | -1.2606 | |
| 384 | D | A | -2.8315 | |
| 385 | D | A | -2.6960 | |
| 386 | A | A | -1.5905 | |
| 387 | L | A | -0.8077 | |
| 388 | H | A | 0.0000 | |
| 389 | L | A | 0.0000 | |
| 390 | L | A | 0.0000 | |
| 391 | Q | A | 0.0000 | |
| 392 | A | A | 0.0000 | |
| 393 | K | A | -1.4194 | |
| 394 | G | A | 0.0000 | |
| 395 | D | A | -2.9527 | |
| 396 | H | A | -2.8405 | |
| 397 | E | A | -2.8359 | |
| 398 | S | A | -2.2425 | |
| 399 | T | A | 0.0000 | |
| 400 | A | A | -0.3362 | |
| 401 | V | A | 0.0000 | |
| 402 | S | A | 0.1205 | |
| 403 | L | A | 0.0000 | |
| 404 | A | A | 0.0000 | |
| 405 | R | A | -1.4369 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine