| Chain sequence(s) |
A: SKLEEILKQIEEQYDFMKSWLGYEELKKEAEKAGEKAKEKFKELAEKKSLNEATKEVSREIYKDFVDLFEKQVKLDE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:03)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:09:05)
[INFO] Main: Simulation completed successfully. (00:09:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -1.9201 | |
| 2 | K | A | -2.8403 | |
| 3 | L | A | -2.2268 | |
| 4 | E | A | -3.5900 | |
| 5 | E | A | -3.8891 | |
| 6 | I | A | -2.9905 | |
| 7 | L | A | -3.4513 | |
| 8 | K | A | -4.4637 | |
| 9 | Q | A | -4.0150 | |
| 10 | I | A | 0.0000 | |
| 11 | E | A | -4.4343 | |
| 12 | E | A | -3.6611 | |
| 13 | Q | A | -1.9293 | |
| 14 | Y | A | 0.0000 | |
| 15 | D | A | -2.7209 | |
| 16 | F | A | 0.1795 | |
| 17 | M | A | 0.0000 | |
| 18 | K | A | -1.9461 | |
| 19 | S | A | -0.2469 | |
| 20 | W | A | 0.3391 | |
| 21 | L | A | 0.0000 | |
| 22 | G | A | -1.1853 | |
| 23 | Y | A | -1.9898 | |
| 24 | E | A | -3.5187 | |
| 25 | E | A | -3.9222 | |
| 26 | L | A | 0.0000 | |
| 27 | K | A | -4.0491 | |
| 28 | K | A | -4.7812 | |
| 29 | E | A | -4.2729 | |
| 30 | A | A | 0.0000 | |
| 31 | E | A | -5.2394 | |
| 32 | K | A | -4.4503 | |
| 33 | A | A | -3.5738 | |
| 34 | G | A | 0.0000 | |
| 35 | E | A | -4.6288 | |
| 36 | K | A | -4.3652 | |
| 37 | A | A | 0.0000 | |
| 38 | K | A | -3.7966 | |
| 39 | E | A | -4.1649 | |
| 40 | K | A | -3.5513 | |
| 41 | F | A | 0.0000 | |
| 42 | K | A | -3.6640 | |
| 43 | E | A | -4.0716 | |
| 44 | L | A | -3.4356 | |
| 45 | A | A | -3.0781 | |
| 46 | E | A | -3.7044 | |
| 47 | K | A | -3.7027 | |
| 48 | K | A | -3.2299 | |
| 49 | S | A | -2.0239 | |
| 50 | L | A | -1.7535 | |
| 51 | N | A | -2.1879 | |
| 52 | E | A | -2.5168 | |
| 53 | A | A | 0.0000 | |
| 54 | T | A | -2.2341 | |
| 55 | K | A | -3.1830 | |
| 56 | E | A | -3.2087 | |
| 57 | V | A | 0.0000 | |
| 58 | S | A | -2.1281 | |
| 59 | R | A | -2.9828 | |
| 60 | E | A | -2.5005 | |
| 61 | I | A | -0.9456 | |
| 62 | Y | A | -0.3043 | |
| 63 | K | A | -1.8336 | |
| 64 | D | A | -1.3252 | |
| 65 | F | A | 0.3968 | |
| 66 | V | A | -0.1197 | |
| 67 | D | A | -1.7210 | |
| 68 | L | A | 0.0000 | |
| 69 | F | A | 0.2716 | |
| 70 | E | A | -1.3341 | |
| 71 | K | A | -1.5348 | |
| 72 | Q | A | -1.1955 | |
| 73 | V | A | -1.1924 | |
| 74 | K | A | -2.4108 | |
| 75 | L | A | -1.4699 | |
| 76 | D | A | -2.7725 | |
| 77 | E | A | -2.7864 |