| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLKLSCAASGFTFNKYAMNWVRQAPGKGLEWVARIRSKYQNYATYYADSVKDRFTISRDDSKNTAYLQMNNLKTEDTAVYYCVRHGNFGNSYISYWAYWGQGTLVTV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:09)
[INFO] Main: Simulation completed successfully. (00:02:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 175 | E | A | -2.2043 | |
| 176 | V | A | -1.3498 | |
| 177 | Q | A | -1.3939 | |
| 178 | L | A | 0.0000 | |
| 179 | V | A | 0.9378 | |
| 180 | E | A | 0.0000 | |
| 181 | S | A | -0.2058 | |
| 182 | G | A | -0.7565 | |
| 183 | G | A | 0.1154 | |
| 184 | G | A | 0.7307 | |
| 185 | L | A | 1.5720 | |
| 186 | V | A | 0.1712 | |
| 187 | Q | A | -1.2525 | |
| 188 | P | A | -1.7179 | |
| 189 | G | A | -1.8557 | |
| 190 | G | A | -1.2306 | |
| 191 | S | A | -1.4240 | |
| 192 | L | A | -0.9798 | |
| 193 | K | A | -1.8123 | |
| 194 | L | A | 0.0000 | |
| 195 | S | A | -0.3205 | |
| 196 | C | A | 0.0000 | |
| 197 | A | A | -0.1674 | |
| 198 | A | A | 0.0000 | |
| 199 | S | A | -1.1056 | |
| 200 | G | A | -1.3245 | |
| 201 | F | A | -0.7566 | |
| 202 | T | A | -0.6338 | |
| 203 | F | A | 0.0000 | |
| 204 | N | A | -1.5601 | |
| 205 | K | A | -1.8654 | |
| 206 | Y | A | -0.9313 | |
| 207 | A | A | -0.7505 | |
| 208 | M | A | 0.0000 | |
| 209 | N | A | 0.0000 | |
| 210 | W | A | 0.0000 | |
| 211 | V | A | 0.0000 | |
| 212 | R | A | 0.0000 | |
| 213 | Q | A | -0.3471 | |
| 214 | A | A | -0.9690 | |
| 215 | P | A | -0.9585 | |
| 216 | G | A | -1.5684 | |
| 217 | K | A | -2.0769 | |
| 218 | G | A | -0.9390 | |
| 219 | L | A | 0.6317 | |
| 220 | E | A | -0.1756 | |
| 221 | W | A | 0.2432 | |
| 222 | V | A | 0.0000 | |
| 223 | A | A | 0.0000 | |
| 224 | R | A | -0.3304 | |
| 225 | I | A | 0.0000 | |
| 226 | R | A | -1.3638 | |
| 227 | S | A | 0.0000 | |
| 228 | K | A | -1.6376 | |
| 229 | Y | A | -0.4853 | |
| 230 | Q | A | -1.6891 | |
| 231 | N | A | -1.6930 | |
| 232 | Y | A | -0.8514 | |
| 233 | A | A | -0.6561 | |
| 234 | T | A | -0.1969 | |
| 235 | Y | A | 0.0449 | |
| 236 | Y | A | -0.7824 | |
| 237 | A | A | -1.3186 | |
| 238 | D | A | -2.4797 | |
| 239 | S | A | -1.8280 | |
| 240 | V | A | 0.0000 | |
| 241 | K | A | -2.8102 | |
| 242 | D | A | -3.0258 | |
| 243 | R | A | -2.3281 | |
| 244 | F | A | 0.0000 | |
| 245 | T | A | -0.9478 | |
| 246 | I | A | 0.0000 | |
| 247 | S | A | -0.3387 | |
| 248 | R | A | -0.9552 | |
| 249 | D | A | -1.3844 | |
| 250 | D | A | -1.8565 | |
| 251 | S | A | -1.5266 | |
| 252 | K | A | -2.3421 | |
| 253 | N | A | -1.7148 | |
| 254 | T | A | -0.9588 | |
| 255 | A | A | 0.0000 | |
| 256 | Y | A | -0.4146 | |
| 257 | L | A | 0.0000 | |
| 258 | Q | A | -1.0121 | |
| 259 | M | A | 0.0000 | |
| 260 | N | A | -2.0744 | |
| 261 | N | A | -2.5037 | |
| 262 | L | A | 0.0000 | |
| 263 | K | A | -2.3965 | |
| 264 | T | A | -1.6113 | |
| 265 | E | A | -2.1896 | |
| 266 | D | A | 0.0000 | |
| 267 | T | A | -0.2930 | |
| 268 | A | A | 0.0000 | |
| 269 | V | A | 0.8684 | |
| 270 | Y | A | 0.0000 | |
| 271 | Y | A | 0.5996 | |
| 272 | C | A | 0.0000 | |
| 273 | V | A | 0.0000 | |
| 274 | R | A | 0.0000 | |
| 275 | H | A | 0.6481 | |
| 276 | G | A | 0.0000 | |
| 277 | N | A | 0.3074 | |
| 278 | F | A | 1.5783 | |
| 279 | G | A | -0.1100 | |
| 280 | N | A | -0.7504 | |
| 281 | S | A | 0.7013 | |
| 282 | Y | A | 1.7871 | |
| 283 | I | A | 2.2660 | |
| 284 | S | A | 1.3366 | |
| 285 | Y | A | 1.4698 | |
| 286 | W | A | 1.0376 | |
| 287 | A | A | 0.6525 | |
| 288 | Y | A | 0.4931 | |
| 289 | W | A | 0.4679 | |
| 290 | G | A | -0.0455 | |
| 291 | Q | A | -0.6577 | |
| 292 | G | A | 0.0000 | |
| 293 | T | A | 0.5388 | |
| 294 | L | A | 1.3977 | |
| 295 | V | A | 0.0000 | |
| 296 | T | A | 0.5568 | |
| 297 | V | A | -0.1913 |