Project name: 202(3)

Status: done

Started: 2026-01-20 08:08:47
Settings
Chain sequence(s) A: KWCFRVCYRYICYRRCR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:23)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:23)
Show buried residues

Minimal score value
-2.5978
Maximal score value
2.2776
Average score
-0.3128
Total score value
-5.3173

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -1.4608
2 W A -0.1273
3 C A -0.7531
4 F A -0.8243
5 R A -1.8530
6 V A -0.0511
7 C A 1.4744
8 Y A 1.7296
9 R A 0.0042
10 Y A 1.5306
11 I A 2.2776
12 C A 1.3817
13 Y A 0.0249
14 R A -2.3929
15 R A -2.5978
16 C A -1.7554
17 R A -1.9246
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Laboratory of Theory of Biopolymers 2018