| Chain sequence(s) |
A: ATFEIVNRCSYTVWAAASKGDAALDAGGRQLNSGESWTINVEPGTNGGKIWARTDCYFDDSGSGICKTGDCGGLLRCKRFGRPPTTLAEFSLNQYGKDYIDISNIKGFNVPMDFSPTTRGCRGVRCAADIVGQCPAKLKAPGGGCNDACTVFQTSEYCCTTGKCGPTEYSRFFKRLCPDAFSYVLDKPTTVTCPGSSNYRVTFCPTA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | DS21A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 0.300849 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:01:54)
[INFO] FoldX: Starting FoldX energy minimalization (00:01:56)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:53)
[INFO] Main: Simulation completed successfully. (00:02:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -1.2812 | |
| 2 | T | A | -1.2697 | |
| 3 | F | A | 0.0000 | |
| 4 | E | A | -1.4016 | |
| 5 | I | A | 0.0000 | |
| 6 | V | A | 0.0000 | |
| 7 | N | A | 0.0000 | |
| 8 | R | A | -2.2316 | |
| 9 | C | A | 0.0000 | |
| 10 | S | A | -0.5035 | |
| 11 | Y | A | -0.1036 | |
| 12 | T | A | -0.8377 | |
| 13 | V | A | 0.0000 | |
| 14 | W | A | -0.7478 | |
| 15 | A | A | 0.0000 | |
| 16 | A | A | 0.0000 | |
| 17 | A | A | 0.0000 | |
| 18 | S | A | 0.0000 | |
| 19 | K | A | -2.1642 | |
| 20 | G | A | -1.9022 | |
| 21 | S | A | -1.5507 | mutated: DS21A |
| 22 | A | A | -1.8707 | |
| 23 | A | A | -2.0429 | |
| 24 | L | A | 0.0000 | |
| 25 | D | A | -2.1318 | |
| 26 | A | A | -1.4391 | |
| 27 | G | A | 0.0000 | |
| 28 | G | A | 0.0000 | |
| 29 | R | A | -1.3345 | |
| 30 | Q | A | -1.3979 | |
| 31 | L | A | 0.0000 | |
| 32 | N | A | -1.5032 | |
| 33 | S | A | -1.4327 | |
| 34 | G | A | -1.6842 | |
| 35 | E | A | -1.8335 | |
| 36 | S | A | -1.4413 | |
| 37 | W | A | -0.7236 | |
| 38 | T | A | -0.9329 | |
| 39 | I | A | 0.0000 | |
| 40 | N | A | -2.2933 | |
| 41 | V | A | 0.0000 | |
| 42 | E | A | -2.7157 | |
| 43 | P | A | -1.8629 | |
| 44 | G | A | -1.5421 | |
| 45 | T | A | 0.0000 | |
| 46 | N | A | -2.0365 | |
| 47 | G | A | -1.2538 | |
| 48 | G | A | 0.0000 | |
| 49 | K | A | -1.1010 | |
| 50 | I | A | 0.0000 | |
| 51 | W | A | 0.0000 | |
| 52 | A | A | 0.0000 | |
| 53 | R | A | 0.0000 | |
| 54 | T | A | -0.9242 | |
| 55 | D | A | -1.6196 | |
| 56 | C | A | 0.0000 | |
| 57 | Y | A | 0.9332 | |
| 58 | F | A | -0.0916 | |
| 59 | D | A | -2.1912 | |
| 60 | D | A | -2.7512 | |
| 61 | S | A | -1.6686 | |
| 62 | G | A | -1.0649 | |
| 63 | S | A | -0.7180 | |
| 64 | G | A | 0.1954 | |
| 65 | I | A | 0.6913 | |
| 66 | C | A | 0.0000 | |
| 67 | K | A | -1.6042 | |
| 68 | T | A | 0.0000 | |
| 69 | G | A | 0.0000 | |
| 70 | D | A | -1.0783 | |
| 71 | C | A | 0.0000 | |
| 72 | G | A | -1.1921 | |
| 73 | G | A | 0.2006 | |
| 74 | L | A | -0.5212 | |
| 75 | L | A | -0.6694 | |
| 76 | R | A | -2.0945 | |
| 77 | C | A | 0.0000 | |
| 78 | K | A | -3.0513 | |
| 79 | R | A | -3.2144 | |
| 80 | F | A | -1.5688 | |
| 81 | G | A | -1.5388 | |
| 82 | R | A | -2.1141 | |
| 83 | P | A | -1.1240 | |
| 84 | P | A | 0.0000 | |
| 85 | T | A | 0.0000 | |
| 86 | T | A | 0.0000 | |
| 87 | L | A | 0.0000 | |
| 88 | A | A | 0.0000 | |
| 89 | E | A | -0.9287 | |
| 90 | F | A | 0.0000 | |
| 91 | S | A | -1.1141 | |
| 92 | L | A | 0.0000 | |
| 93 | N | A | -1.2755 | |
| 94 | Q | A | -0.6069 | |
| 95 | Y | A | 0.5012 | |
| 96 | G | A | -0.6440 | |
| 97 | K | A | -1.0119 | |
| 98 | D | A | 0.0000 | |
| 99 | Y | A | -0.0842 | |
| 100 | I | A | 0.0000 | |
| 101 | D | A | 0.0000 | |
| 102 | I | A | 0.0000 | |
| 103 | S | A | 0.0000 | |
| 104 | N | A | 0.0000 | |
| 105 | I | A | 0.6635 | |
| 106 | K | A | -0.8091 | |
| 107 | G | A | 0.0000 | |
| 108 | F | A | 0.0000 | |
| 109 | N | A | 0.0000 | |
| 110 | V | A | 0.0000 | |
| 111 | P | A | -0.6262 | |
| 112 | M | A | 0.0000 | |
| 113 | D | A | 0.0000 | |
| 114 | F | A | 0.0000 | |
| 115 | S | A | -1.0681 | |
| 116 | P | A | -1.3719 | |
| 117 | T | A | -1.1949 | |
| 118 | T | A | -1.4837 | |
| 119 | R | A | -2.3896 | |
| 120 | G | A | -1.7271 | |
| 121 | C | A | -1.5312 | |
| 122 | R | A | -2.3426 | |
| 123 | G | A | -1.4711 | |
| 124 | V | A | 0.0000 | |
| 125 | R | A | -1.6344 | |
| 126 | C | A | 0.0000 | |
| 127 | A | A | -0.6924 | |
| 128 | A | A | -1.1911 | |
| 129 | D | A | -1.9327 | |
| 130 | I | A | 0.0000 | |
| 131 | V | A | -0.7744 | |
| 132 | G | A | -1.4748 | |
| 133 | Q | A | -1.7885 | |
| 134 | C | A | 0.0000 | |
| 135 | P | A | -1.2285 | |
| 136 | A | A | -1.4914 | |
| 137 | K | A | -2.0236 | |
| 138 | L | A | 0.0000 | |
| 139 | K | A | -2.3708 | |
| 140 | A | A | -1.3455 | |
| 141 | P | A | -1.0431 | |
| 142 | G | A | -1.3535 | |
| 143 | G | A | -1.1185 | |
| 144 | G | A | -0.6598 | |
| 145 | C | A | 0.0000 | |
| 146 | N | A | -0.7952 | |
| 147 | D | A | 0.0000 | |
| 148 | A | A | 0.0000 | |
| 149 | C | A | -0.1596 | |
| 150 | T | A | -0.0974 | |
| 151 | V | A | 0.1429 | |
| 152 | F | A | -0.0193 | |
| 153 | Q | A | -0.8825 | |
| 154 | T | A | -0.8620 | |
| 155 | S | A | -1.3441 | |
| 156 | E | A | -2.1690 | |
| 157 | Y | A | -0.5194 | |
| 158 | C | A | -0.2161 | |
| 159 | C | A | -0.6334 | |
| 160 | T | A | -0.7281 | |
| 161 | T | A | -1.0536 | |
| 162 | G | A | -1.1217 | |
| 163 | K | A | -2.0469 | |
| 164 | C | A | -0.9657 | |
| 165 | G | A | -0.6398 | |
| 166 | P | A | -0.9513 | |
| 167 | T | A | -1.7780 | |
| 168 | E | A | -2.5627 | |
| 169 | Y | A | 0.0000 | |
| 170 | S | A | 0.0000 | |
| 171 | R | A | -3.1277 | |
| 172 | F | A | 0.0000 | |
| 173 | F | A | 0.0000 | |
| 174 | K | A | -2.1147 | |
| 175 | R | A | -2.4677 | |
| 176 | L | A | -1.5031 | |
| 177 | C | A | 0.0000 | |
| 178 | P | A | -1.3945 | |
| 179 | D | A | -1.2756 | |
| 180 | A | A | 0.0000 | |
| 181 | F | A | 0.2231 | |
| 182 | S | A | 0.0000 | |
| 183 | Y | A | 0.8829 | |
| 184 | V | A | 1.9087 | |
| 185 | L | A | 1.2658 | |
| 186 | D | A | 0.0000 | |
| 187 | K | A | -1.2874 | |
| 188 | P | A | -0.7116 | |
| 189 | T | A | -0.6967 | |
| 190 | T | A | -0.3113 | |
| 191 | V | A | 0.0000 | |
| 192 | T | A | -0.3995 | |
| 193 | C | A | 0.0000 | |
| 194 | P | A | -1.1156 | |
| 195 | G | A | -0.9194 | |
| 196 | S | A | -1.0655 | |
| 197 | S | A | 0.0000 | |
| 198 | N | A | -1.1785 | |
| 199 | Y | A | 0.0000 | |
| 200 | R | A | -1.2874 | |
| 201 | V | A | 0.0000 | |
| 202 | T | A | 0.0000 | |
| 203 | F | A | 0.0000 | |
| 204 | C | A | -0.6170 | |
| 205 | P | A | -0.6613 | |
| 206 | T | A | -0.3482 | |
| 207 | A | A | -0.1044 |