| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTAPQHEGPDDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRAGPDGVPLPSDPPPSPLYTPPPPSSPYAVLPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPKPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9487 | |
| 2 | L | A | 1.9729 | |
| 3 | P | A | 0.6487 | |
| 4 | P | A | 0.3553 | |
| 5 | T | A | 0.1125 | |
| 6 | T | A | 0.1302 | |
| 7 | P | A | 0.1732 | |
| 8 | V | A | 1.2233 | |
| 9 | A | A | 0.0342 | |
| 10 | K | A | -1.1487 | |
| 11 | V | A | -0.3838 | |
| 12 | Q | A | -1.5176 | |
| 13 | S | A | -1.6002 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4268 | |
| 16 | E | A | -2.4420 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4432 | |
| 20 | P | A | 0.1009 | |
| 21 | T | A | 0.1115 | |
| 22 | S | A | -0.1703 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1041 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2731 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8647 | |
| 31 | R | A | -2.6613 | |
| 32 | L | A | -0.7984 | |
| 33 | L | A | 1.1292 | |
| 34 | T | A | 1.3564 | |
| 35 | V | A | 1.8802 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2573 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6178 | |
| 40 | K | A | -1.6425 | |
| 41 | D | A | -0.9407 | |
| 42 | I | A | 0.8095 | |
| 43 | V | A | 1.0098 | |
| 44 | K | A | -1.1947 | |
| 45 | N | A | -1.9294 | |
| 46 | G | A | -1.2376 | |
| 47 | K | A | -0.9464 | |
| 48 | V | A | 1.4936 | |
| 49 | V | A | 2.0633 | |
| 50 | V | A | 1.3098 | |
| 51 | P | A | 0.4905 | |
| 52 | K | A | -0.6209 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1698 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4023 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3124 | |
| 70 | K | A | -1.8273 | |
| 71 | F | A | -0.6813 | |
| 72 | A | A | -0.5777 | |
| 73 | L | A | -0.8590 | |
| 74 | P | A | -1.2537 | |
| 75 | Q | A | -2.4646 | |
| 76 | K | A | -3.0878 | |
| 77 | D | A | -2.9865 | |
| 78 | F | A | -1.6284 | |
| 79 | Y | A | -1.9147 | |
| 80 | D | A | -2.7593 | |
| 81 | P | A | -2.3509 | |
| 82 | E | A | -3.0648 | |
| 83 | K | A | -3.4426 | |
| 84 | E | A | -2.4984 | |
| 85 | R | A | -1.3088 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6374 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -1.0077 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3554 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7191 | |
| 99 | G | A | -0.4999 | |
| 100 | P | A | -0.3791 | |
| 101 | L | A | 0.0225 | |
| 102 | G | A | -0.2899 | |
| 103 | K | A | -0.8495 | |
| 104 | G | A | -0.6492 | |
| 105 | S | A | -0.6273 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1148 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.3872 | |
| 110 | L | A | 0.2216 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1031 | |
| 113 | K | A | -0.2336 | |
| 114 | L | A | -1.2343 | |
| 115 | G | A | -1.0539 | |
| 116 | D | A | -1.4158 | |
| 117 | T | A | -1.2647 | |
| 118 | E | A | -2.6568 | |
| 119 | N | A | -2.3818 | |
| 120 | P | A | -1.6344 | |
| 121 | T | A | -0.8559 | |
| 122 | A | A | -0.5746 | |
| 123 | P | A | -0.4553 | |
| 124 | Q | A | -1.1127 | |
| 125 | H | A | -1.6262 | |
| 126 | E | A | -2.7054 | |
| 127 | G | A | -2.2155 | |
| 128 | P | A | -1.7994 | |
| 129 | D | A | -2.5416 | |
| 130 | D | A | -2.1177 | |
| 131 | R | A | -1.1379 | |
| 132 | V | A | 0.2079 | |
| 133 | A | A | 0.4201 | |
| 134 | F | A | 0.2773 | |
| 135 | S | A | -0.1025 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.8163 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.0722 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5515 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2637 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0861 | |
| 157 | D | A | 0.2491 | |
| 158 | L | A | 0.6241 | |
| 159 | A | A | 0.0407 | |
| 160 | E | A | -1.5292 | |
| 161 | P | A | -0.3088 | |
| 162 | C | A | 0.1592 | |
| 163 | P | A | -0.1785 | |
| 164 | G | A | -0.0759 | |
| 165 | L | A | 0.5881 | |
| 166 | P | A | -0.1081 | |
| 167 | P | A | -0.3387 | |
| 168 | G | A | -0.4179 | |
| 169 | A | A | 0.2906 | |
| 170 | C | A | 1.0041 | |
| 171 | P | A | 0.4818 | |
| 172 | P | A | 0.6918 | |
| 173 | I | A | 1.8646 | |
| 174 | Q | A | 0.7661 | |
| 175 | L | A | 1.4404 | |
| 176 | V | A | 0.8007 | |
| 177 | N | A | -0.3787 | |
| 178 | S | A | -0.0189 | |
| 179 | V | A | 0.3612 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3743 | |
| 182 | D | A | 0.0805 | |
| 183 | G | A | -0.1518 | |
| 184 | D | A | -0.5732 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1520 | |
| 190 | F | A | 0.0628 | |
| 191 | G | A | -0.1035 | |
| 192 | N | A | -0.2885 | |
| 193 | M | A | -0.1668 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3525 | |
| 197 | E | A | -2.4959 | |
| 198 | L | A | -1.2016 | |
| 199 | Q | A | -2.5066 | |
| 200 | Q | A | -3.3122 | |
| 201 | D | A | -3.5908 | |
| 202 | R | A | -3.3446 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2030 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3713 | |
| 211 | S | A | -1.8927 | |
| 212 | T | A | -1.4698 | |
| 213 | R | A | -2.1708 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1926 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3043 | |
| 220 | L | A | 0.4742 | |
| 221 | K | A | -1.3799 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9925 | |
| 224 | N | A | -1.7366 | |
| 225 | E | A | -1.3707 | |
| 226 | A | A | -0.6921 | |
| 227 | Y | A | -0.4742 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7097 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.0560 | |
| 234 | F | A | 0.2694 | |
| 235 | G | A | -0.7238 | |
| 236 | R | A | -2.2881 | |
| 237 | R | A | -2.6246 | |
| 238 | E | A | -1.5937 | |
| 239 | Q | A | 0.0973 | |
| 240 | V | A | 1.6802 | |
| 241 | Y | A | 1.2469 | |
| 242 | A | A | 0.1799 | |
| 243 | R | A | -1.3180 | |
| 244 | H | A | -1.1444 | |
| 245 | F | A | -0.1635 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.7153 | |
| 249 | A | A | -1.4262 | |
| 250 | G | A | -1.1852 | |
| 251 | P | A | -0.7551 | |
| 252 | D | A | -0.4399 | |
| 253 | G | A | 0.0426 | |
| 254 | V | A | 1.3155 | |
| 255 | P | A | 0.4620 | |
| 256 | L | A | 0.7308 | |
| 257 | P | A | -0.1845 | |
| 258 | S | A | -1.0707 | |
| 259 | D | A | -2.2026 | |
| 260 | P | A | -1.6630 | |
| 261 | P | A | -1.3121 | |
| 262 | P | A | -0.7634 | |
| 263 | S | A | -0.3698 | |
| 264 | P | A | 0.1955 | |
| 265 | L | A | 1.5246 | |
| 266 | Y | A | 0.8315 | |
| 267 | T | A | 0.0526 | |
| 268 | P | A | 0.1322 | |
| 269 | P | A | 0.1474 | |
| 270 | P | A | -0.4130 | |
| 271 | P | A | -0.1598 | |
| 272 | S | A | -0.3234 | |
| 273 | S | A | 0.1893 | |
| 274 | P | A | 0.4104 | |
| 275 | Y | A | 1.4523 | |
| 276 | A | A | 1.2699 | |
| 277 | V | A | 2.2382 | |
| 278 | L | A | 1.6582 | |
| 279 | P | A | 0.1618 | |
| 280 | P | A | -0.4153 | |
| 281 | T | A | -0.1249 | |
| 282 | D | A | -0.7272 | |
| 283 | Y | A | 0.7998 | |
| 284 | F | A | 0.7007 | |
| 285 | G | A | 0.1515 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8980 | |
| 291 | L | A | 1.5899 | |
| 292 | V | A | 0.5740 | |
| 293 | S | A | -0.1624 | |
| 294 | S | A | -0.9667 | |
| 295 | D | A | -1.8447 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1430 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.7151 | |
| 301 | R | A | -2.0589 | |
| 302 | P | A | -1.0491 | |
| 303 | F | A | -0.2069 | |
| 304 | W | A | -0.5389 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0799 | |
| 307 | R | A | -2.9244 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7660 | |
| 310 | G | A | -1.4312 | |
| 311 | N | A | -1.3950 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9731 | |
| 319 | N | A | -0.9142 | |
| 320 | E | A | -1.0631 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.4086 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.2613 | |
| 333 | N | A | 0.3098 | |
| 334 | F | A | 1.3901 | |
| 335 | T | A | 0.7281 | |
| 336 | I | A | 0.3964 | |
| 337 | S | A | -0.8634 | |
| 338 | Q | A | -1.4730 | |
| 339 | Q | A | -1.1555 | |
| 340 | L | A | 0.5391 | |
| 341 | C | A | -0.0735 | |
| 342 | T | A | -0.4327 | |
| 343 | P | A | -1.1334 | |
| 344 | K | A | -1.6825 | |
| 345 | P | A | -0.8686 | |
| 346 | N | A | -0.7076 | |
| 347 | V | A | 1.3053 | |
| 348 | Y | A | 1.2416 | |
| 349 | D | A | -0.1083 | |
| 350 | P | A | -0.3512 | |
| 351 | S | A | -0.2922 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.6340 | |
| 354 | K | A | -1.7228 | |
| 355 | N | A | -1.7165 | |
| 356 | Y | A | -0.0998 | |
| 357 | L | A | 0.5814 | |
| 358 | R | A | 0.8698 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.1735 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.1369 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9183 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6538 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3163 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3337 | |
| 376 | L | A | -1.7658 | |
| 377 | D | A | -2.0659 | |
| 378 | P | A | -1.0807 | |
| 379 | G | A | -1.0303 | |
| 380 | V | A | -0.9366 | |
| 381 | L | A | -0.5493 | |
| 382 | A | A | -0.6675 | |
| 383 | H | A | -0.8474 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4048 | |
| 386 | T | A | -0.5733 | |
| 387 | M | A | -0.3318 | |
| 388 | N | A | -0.8706 | |
| 389 | P | A | -1.3028 | |
| 390 | T | A | -1.5936 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5824 | |
| 393 | E | A | -3.0029 | |
| 394 | N | A | -2.7404 | |
| 395 | W | A | -1.5772 | |
| 396 | N | A | -1.3335 | |
| 397 | L | A | -0.1917 | |
| 398 | G | A | 0.6861 | |
| 399 | F | A | 2.4355 | |
| 400 | V | A | 1.8611 | |
| 401 | P | A | 0.0710 | |
| 402 | P | A | -1.9361 | |
| 403 | K | A | -3.5696 | |
| 404 | E | A | -3.9243 | |
| 405 | R | A | -4.2981 | |
| 406 | E | A | -3.9292 | |
| 407 | D | A | -2.9212 | |
| 408 | P | A | -1.7932 | |
| 409 | Y | A | -0.9851 | |
| 410 | K | A | -2.0941 | |
| 411 | G | A | -0.6370 | |
| 412 | L | A | 0.6596 | |
| 413 | I | A | 1.5711 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4202 | |
| 416 | E | A | -1.7185 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9529 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0818 | |
| 421 | E | A | -2.7893 | |
| 422 | R | A | -2.5795 | |
| 423 | F | A | -1.3027 | |
| 424 | S | A | -1.4716 | |
| 425 | Q | A | -1.8052 | |
| 426 | D | A | -2.9053 | |
| 427 | L | A | -1.9931 | |
| 428 | D | A | -2.7826 | |
| 429 | Q | A | -2.6173 | |
| 430 | F | A | -1.4235 | |
| 431 | A | A | -0.8780 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5285 | |
| 435 | K | A | -0.6769 | |
| 436 | F | A | 0.1841 | |
| 437 | L | A | 1.0533 | |
| 438 | Y | A | 0.8483 | |
| 439 | Q | A | -0.2527 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine