| Chain sequence(s) |
A: ASNPYVEPRGSGGSGKQSSRVPLY
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:09)
[INFO] Main: Simulation completed successfully. (00:00:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.0199 | |
| 2 | S | A | -0.4347 | |
| 3 | N | A | -1.3577 | |
| 4 | P | A | -0.2448 | |
| 5 | Y | A | 1.5696 | |
| 6 | V | A | 1.5519 | |
| 7 | E | A | -1.5613 | |
| 8 | P | A | -0.9147 | |
| 9 | R | A | -1.9743 | |
| 10 | G | A | -0.8385 | |
| 11 | S | A | -0.3819 | |
| 12 | G | A | -0.5900 | |
| 13 | G | A | -0.5939 | |
| 14 | S | A | -0.3908 | |
| 15 | G | A | -0.8208 | |
| 16 | K | A | -2.0060 | |
| 17 | Q | A | -1.5485 | |
| 18 | S | A | -0.4707 | |
| 19 | S | A | -0.5882 | |
| 20 | R | A | -1.5630 | |
| 21 | V | A | 1.3947 | |
| 22 | P | A | 0.3459 | |
| 23 | L | A | 1.7403 | |
| 24 | Y | A | 1.5972 |