| Chain sequence(s) |
A: MGSSHHHHHHSSGENLYFQGAMAVERNSGDLQLPQEIAMLVPNKTQVVPKSGGEGKVKDIFASPALVRAGGVMIAFVEGRTKNKLFPEVIDLSSSDIVAGYIKAPETWQSLVAEVTKEYWQAHTVLESANNSNHRVGVARLPTGITRGNKVFLLVGSYEERREIDDYIWKAEAWNIKVIEGEATQSTEVQPTQPINWSEPKPLFQTDSPNNKGDLKEFLGGGGSGIVMGNGTLVFPLTAKDESNKVFSLITYSTDDGQKWEIPGGVSSVACRSPRVTEWEEGTLLMVTYCEDGRKVFESRDMGKTWTEAFGTLPGVWLKSGPELPEVSLRVDALITATIEGRKVMLYTQKVRHFLEVDEPNALHLWVTDNNRTFHLGPFSVDCAENKTFANTLLYSDDALHLLQAKGDHESTAVSLARLTEELNTI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:07)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:07)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:07)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:07)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:07)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:16)
[INFO] Main: Simulation completed successfully. (00:06:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7691 | |
| 2 | G | A | -0.1870 | |
| 3 | S | A | -0.7126 | |
| 4 | S | A | -1.2489 | |
| 5 | H | A | -2.0754 | |
| 6 | H | A | -2.4293 | |
| 7 | H | A | -2.6413 | |
| 8 | H | A | -2.6653 | |
| 9 | H | A | -2.4413 | |
| 10 | H | A | -2.1102 | |
| 11 | S | A | -1.6100 | |
| 12 | S | A | -1.6324 | |
| 13 | G | A | -1.8093 | |
| 14 | E | A | -2.1439 | |
| 15 | N | A | -0.9475 | |
| 16 | L | A | 1.3512 | |
| 17 | Y | A | 1.8804 | |
| 18 | F | A | 1.9914 | |
| 19 | Q | A | 0.3562 | |
| 20 | G | A | -0.0350 | |
| 21 | A | A | 0.4299 | |
| 22 | M | A | 1.0622 | |
| 23 | A | A | 0.2804 | |
| 24 | V | A | 0.6675 | |
| 25 | E | A | -1.9608 | |
| 26 | R | A | -3.4359 | |
| 27 | N | A | -2.9327 | |
| 28 | S | A | -1.9041 | |
| 29 | G | A | -1.7719 | |
| 30 | D | A | -2.1635 | |
| 31 | L | A | -0.0822 | |
| 32 | Q | A | -1.5421 | |
| 33 | L | A | -0.4026 | |
| 34 | P | A | -1.1826 | |
| 35 | Q | A | -1.5166 | |
| 36 | E | A | -2.0036 | |
| 37 | I | A | 0.0000 | |
| 38 | A | A | -0.3292 | |
| 39 | M | A | 0.0000 | |
| 40 | L | A | 0.0000 | |
| 41 | V | A | -0.3593 | |
| 42 | P | A | 0.0000 | |
| 43 | N | A | -2.1482 | |
| 44 | K | A | -2.1868 | |
| 45 | T | A | 0.0000 | |
| 46 | Q | A | -1.7052 | |
| 47 | V | A | 0.0000 | |
| 48 | V | A | -1.5420 | |
| 49 | P | A | -1.9276 | |
| 50 | K | A | -2.1262 | |
| 51 | S | A | -1.5950 | |
| 52 | G | A | -1.6917 | |
| 53 | G | A | -2.0591 | |
| 54 | E | A | -2.6430 | |
| 55 | G | A | -2.1612 | |
| 56 | K | A | -2.1340 | |
| 57 | V | A | -0.9835 | |
| 58 | K | A | 0.0000 | |
| 59 | D | A | -1.3644 | |
| 60 | I | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | A | A | -0.0313 | |
| 63 | S | A | 0.0371 | |
| 64 | P | A | 0.0000 | |
| 65 | A | A | 0.0000 | |
| 66 | L | A | 0.0000 | |
| 67 | V | A | 0.0000 | |
| 68 | R | A | -1.0730 | |
| 69 | A | A | 0.0000 | |
| 70 | G | A | -1.3905 | |
| 71 | G | A | -1.2033 | |
| 72 | V | A | 0.0000 | |
| 73 | M | A | 0.0000 | |
| 74 | I | A | 0.0000 | |
| 75 | A | A | 0.0000 | |
| 76 | F | A | 0.0000 | |
| 77 | V | A | 0.0000 | |
| 78 | E | A | 0.0000 | |
| 79 | G | A | 0.0000 | |
| 80 | R | A | -0.6337 | |
| 81 | T | A | -1.1568 | |
| 82 | K | A | -1.6692 | |
| 83 | N | A | -1.7127 | |
| 84 | K | A | -1.9737 | |
| 85 | L | A | -0.7747 | |
| 86 | F | A | 0.0000 | |
| 87 | P | A | -1.2663 | |
| 88 | E | A | -1.5262 | |
| 89 | V | A | 0.2227 | |
| 90 | I | A | 0.6335 | |
| 91 | D | A | -1.5659 | |
| 92 | L | A | 0.0000 | |
| 93 | S | A | 0.0000 | |
| 94 | S | A | 0.0000 | |
| 95 | S | A | 0.0000 | |
| 96 | D | A | 0.0000 | |
| 97 | I | A | 0.0000 | |
| 98 | V | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | G | A | 0.0000 | |
| 101 | Y | A | 0.0000 | |
| 102 | I | A | 0.0000 | |
| 103 | K | A | -1.1430 | |
| 104 | A | A | -1.0296 | |
| 105 | P | A | -1.3253 | |
| 106 | E | A | -2.3274 | |
| 107 | T | A | -1.2524 | |
| 108 | W | A | -1.0947 | |
| 109 | Q | A | -1.3730 | |
| 110 | S | A | -1.1420 | |
| 111 | L | A | 0.0000 | |
| 112 | V | A | -0.5352 | |
| 113 | A | A | -0.6686 | |
| 114 | E | A | -1.1597 | |
| 115 | V | A | 0.0000 | |
| 116 | T | A | -0.8910 | |
| 117 | K | A | -1.6189 | |
| 118 | E | A | -1.7632 | |
| 119 | Y | A | -0.1357 | |
| 120 | W | A | -0.5999 | |
| 121 | Q | A | -0.8497 | |
| 122 | A | A | 0.0000 | |
| 123 | H | A | -0.9424 | |
| 124 | T | A | 0.0000 | |
| 125 | V | A | 0.0000 | |
| 126 | L | A | 0.0000 | |
| 127 | E | A | -1.2563 | |
| 128 | S | A | -0.9758 | |
| 129 | A | A | -1.1944 | |
| 130 | N | A | -2.3680 | |
| 131 | N | A | -2.5778 | |
| 132 | S | A | -2.2151 | |
| 133 | N | A | -2.3216 | |
| 134 | H | A | -1.8005 | |
| 135 | R | A | -2.4829 | |
| 136 | V | A | 0.0000 | |
| 137 | G | A | 0.0000 | |
| 138 | V | A | 0.0000 | |
| 139 | A | A | 0.0000 | |
| 140 | R | A | -0.2830 | |
| 141 | L | A | 0.0377 | |
| 142 | P | A | 0.0000 | |
| 143 | T | A | 0.0000 | |
| 144 | G | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | T | A | -1.0282 | |
| 147 | R | A | -1.8270 | |
| 148 | G | A | -1.6443 | |
| 149 | N | A | -1.9881 | |
| 150 | K | A | -2.3854 | |
| 151 | V | A | 0.0000 | |
| 152 | F | A | 0.0000 | |
| 153 | L | A | 0.0000 | |
| 154 | L | A | 0.0000 | |
| 155 | V | A | 0.0000 | |
| 156 | G | A | 0.0000 | |
| 157 | S | A | -0.5120 | |
| 158 | Y | A | -0.6440 | |
| 159 | E | A | -1.3939 | |
| 160 | E | A | -1.5167 | |
| 161 | R | A | -1.5886 | |
| 162 | R | A | -1.0273 | |
| 163 | E | A | -0.6836 | |
| 164 | I | A | 0.6754 | |
| 165 | D | A | -1.3713 | |
| 166 | D | A | -1.2861 | |
| 167 | Y | A | 0.6945 | |
| 168 | I | A | 0.5314 | |
| 169 | W | A | -0.3102 | |
| 170 | K | A | -1.3285 | |
| 171 | A | A | -1.0304 | |
| 172 | E | A | -1.0677 | |
| 173 | A | A | -0.6389 | |
| 174 | W | A | -0.7793 | |
| 175 | N | A | -1.2772 | |
| 176 | I | A | 0.0000 | |
| 177 | K | A | -0.9541 | |
| 178 | V | A | 0.0000 | |
| 179 | I | A | 0.0000 | |
| 180 | E | A | -1.4090 | |
| 181 | G | A | 0.0000 | |
| 182 | E | A | -2.4644 | |
| 183 | A | A | 0.0000 | |
| 184 | T | A | -1.7238 | |
| 185 | Q | A | -1.7797 | |
| 186 | S | A | -1.2941 | |
| 187 | T | A | -1.0163 | |
| 188 | E | A | -1.6374 | |
| 189 | V | A | 0.2878 | |
| 190 | Q | A | -1.1039 | |
| 191 | P | A | -1.2332 | |
| 192 | T | A | -0.6554 | |
| 193 | Q | A | -0.9863 | |
| 194 | P | A | 0.0000 | |
| 195 | I | A | 0.0000 | |
| 196 | N | A | -1.8456 | |
| 197 | W | A | -1.6292 | |
| 198 | S | A | -1.6226 | |
| 199 | E | A | -2.1220 | |
| 200 | P | A | -1.4008 | |
| 201 | K | A | -1.4859 | |
| 202 | P | A | -1.1124 | |
| 203 | L | A | 0.0000 | |
| 204 | F | A | -1.2330 | |
| 205 | Q | A | -2.0608 | |
| 206 | T | A | -1.5694 | |
| 207 | D | A | -2.5451 | |
| 208 | S | A | -2.2852 | |
| 209 | P | A | -2.2734 | |
| 210 | N | A | -3.1329 | |
| 211 | N | A | -3.0371 | |
| 212 | K | A | -2.9809 | |
| 213 | G | A | -2.9276 | |
| 214 | D | A | -3.7976 | |
| 215 | L | A | -2.9225 | |
| 216 | K | A | -3.1514 | |
| 217 | E | A | -1.8480 | |
| 218 | F | A | 0.0000 | |
| 219 | L | A | -0.3203 | |
| 220 | G | A | 0.0000 | |
| 221 | G | A | 0.0000 | |
| 222 | G | A | 0.0000 | |
| 223 | G | A | 0.0000 | |
| 224 | S | A | 0.1087 | |
| 225 | G | A | 0.0000 | |
| 226 | I | A | 0.3934 | |
| 227 | V | A | 0.2760 | |
| 228 | M | A | 0.0000 | |
| 229 | G | A | -1.5380 | |
| 230 | N | A | -1.7210 | |
| 231 | G | A | -1.1004 | |
| 232 | T | A | 0.0000 | |
| 233 | L | A | 0.0000 | |
| 234 | V | A | 0.0000 | |
| 235 | F | A | 0.0000 | |
| 236 | P | A | 0.0000 | |
| 237 | L | A | 0.0000 | |
| 238 | T | A | -0.5665 | |
| 239 | A | A | 0.0000 | |
| 240 | K | A | -2.3615 | |
| 241 | D | A | -3.2604 | |
| 242 | E | A | -3.6430 | |
| 243 | S | A | -2.5543 | |
| 244 | N | A | -3.0402 | |
| 245 | K | A | -2.1953 | |
| 246 | V | A | 0.0000 | |
| 247 | F | A | -0.2364 | |
| 248 | S | A | 0.0000 | |
| 249 | L | A | 0.0000 | |
| 250 | I | A | 0.0000 | |
| 251 | T | A | 0.0000 | |
| 252 | Y | A | -0.6039 | |
| 253 | S | A | 0.0000 | |
| 254 | T | A | -1.6128 | |
| 255 | D | A | -2.0739 | |
| 256 | D | A | -2.8596 | |
| 257 | G | A | 0.0000 | |
| 258 | Q | A | -2.7254 | |
| 259 | K | A | -3.0266 | |
| 260 | W | A | -1.9247 | |
| 261 | E | A | -1.6858 | |
| 262 | I | A | -1.0474 | |
| 263 | P | A | 0.0000 | |
| 264 | G | A | -1.6581 | |
| 265 | G | A | -0.8787 | |
| 266 | V | A | 0.4046 | |
| 267 | S | A | 0.0000 | |
| 268 | S | A | -0.0836 | |
| 269 | V | A | 0.4680 | |
| 270 | A | A | -0.9712 | |
| 271 | C | A | 0.0000 | |
| 272 | R | A | -1.7086 | |
| 273 | S | A | -0.8535 | |
| 274 | P | A | 0.0000 | |
| 275 | R | A | -0.3186 | |
| 276 | V | A | 0.0000 | |
| 277 | T | A | 0.0000 | |
| 278 | E | A | -0.8645 | |
| 279 | W | A | -1.3850 | |
| 280 | E | A | -2.6813 | |
| 281 | E | A | -3.1204 | |
| 282 | G | A | -2.3567 | |
| 283 | T | A | 0.0000 | |
| 284 | L | A | 0.0000 | |
| 285 | L | A | 0.0000 | |
| 286 | M | A | 0.0000 | |
| 287 | V | A | 0.0000 | |
| 288 | T | A | 0.0000 | |
| 289 | Y | A | -1.4581 | |
| 290 | C | A | 0.0000 | |
| 291 | E | A | -3.2422 | |
| 292 | D | A | -3.1772 | |
| 293 | G | A | 0.0000 | |
| 294 | R | A | 0.0000 | |
| 295 | K | A | -0.8592 | |
| 296 | V | A | 0.0000 | |
| 297 | F | A | 0.0000 | |
| 298 | E | A | -0.9781 | |
| 299 | S | A | 0.0000 | |
| 300 | R | A | -2.9170 | |
| 301 | D | A | -2.0693 | |
| 302 | M | A | -1.2111 | |
| 303 | G | A | 0.0000 | |
| 304 | K | A | -2.1795 | |
| 305 | T | A | -1.3629 | |
| 306 | W | A | -0.9840 | |
| 307 | T | A | -0.6164 | |
| 308 | E | A | -0.7868 | |
| 309 | A | A | 0.0762 | |
| 310 | F | A | 1.3086 | |
| 311 | G | A | 0.0600 | |
| 312 | T | A | -0.3132 | |
| 313 | L | A | 0.0000 | |
| 314 | P | A | -0.4419 | |
| 315 | G | A | -0.0461 | |
| 316 | V | A | 0.0000 | |
| 317 | W | A | 0.0825 | |
| 318 | L | A | -0.7651 | |
| 319 | K | A | -2.3088 | |
| 320 | S | A | -2.4000 | |
| 321 | G | A | -1.7595 | |
| 322 | P | A | -1.4041 | |
| 323 | E | A | -2.1763 | |
| 324 | L | A | -1.3749 | |
| 325 | P | A | -1.0457 | |
| 326 | E | A | -1.6030 | |
| 327 | V | A | 0.5915 | |
| 328 | S | A | 0.0000 | |
| 329 | L | A | 0.0000 | |
| 330 | R | A | -0.1252 | |
| 331 | V | A | 0.0000 | |
| 332 | D | A | 0.0000 | |
| 333 | A | A | 0.0000 | |
| 334 | L | A | 0.0000 | |
| 335 | I | A | 0.2788 | |
| 336 | T | A | -0.0590 | |
| 337 | A | A | 0.0000 | |
| 338 | T | A | -1.7400 | |
| 339 | I | A | -2.0024 | |
| 340 | E | A | -2.7868 | |
| 341 | G | A | -2.4135 | |
| 342 | R | A | -3.0596 | |
| 343 | K | A | -2.3949 | |
| 344 | V | A | 0.0000 | |
| 345 | M | A | 0.0000 | |
| 346 | L | A | 0.0000 | |
| 347 | Y | A | 0.0000 | |
| 348 | T | A | 0.0000 | |
| 349 | Q | A | 0.0000 | |
| 350 | K | A | 0.0000 | |
| 351 | V | A | 0.2139 | |
| 352 | R | A | -0.1160 | |
| 353 | H | A | 0.2716 | |
| 354 | F | A | 1.9522 | |
| 355 | L | A | 1.5050 | |
| 356 | E | A | -0.6323 | |
| 357 | V | A | 0.5530 | |
| 358 | D | A | -1.6099 | |
| 359 | E | A | -1.3193 | |
| 360 | P | A | -0.9731 | |
| 361 | N | A | -0.4931 | |
| 362 | A | A | 0.0000 | |
| 363 | L | A | 0.0000 | |
| 364 | H | A | 0.0000 | |
| 365 | L | A | 0.0000 | |
| 366 | W | A | 0.1303 | |
| 367 | V | A | 0.0000 | |
| 368 | T | A | 0.0000 | |
| 369 | D | A | -2.0564 | |
| 370 | N | A | -2.1924 | |
| 371 | N | A | -2.7064 | |
| 372 | R | A | -2.5785 | |
| 373 | T | A | -1.1447 | |
| 374 | F | A | 0.2725 | |
| 375 | H | A | -0.1987 | |
| 376 | L | A | -0.2958 | |
| 377 | G | A | -0.3221 | |
| 378 | P | A | 0.0018 | |
| 379 | F | A | 0.0000 | |
| 380 | S | A | 0.0000 | |
| 381 | V | A | 0.3156 | |
| 382 | D | A | 0.0000 | |
| 383 | C | A | -0.7077 | |
| 384 | A | A | -1.1531 | |
| 385 | E | A | -2.5512 | |
| 386 | N | A | -2.0378 | |
| 387 | K | A | -1.5548 | |
| 388 | T | A | 0.0000 | |
| 389 | F | A | 0.1084 | |
| 390 | A | A | 0.2298 | |
| 391 | N | A | 0.0000 | |
| 392 | T | A | 0.0000 | |
| 393 | L | A | 0.0000 | |
| 394 | L | A | 0.0366 | |
| 395 | Y | A | -0.4654 | |
| 396 | S | A | -1.3950 | |
| 397 | D | A | -2.8958 | |
| 398 | D | A | -2.7707 | |
| 399 | A | A | -1.7264 | |
| 400 | L | A | 0.0000 | |
| 401 | H | A | 0.0000 | |
| 402 | L | A | 0.0000 | |
| 403 | L | A | 0.0000 | |
| 404 | Q | A | 0.0000 | |
| 405 | A | A | 0.0000 | |
| 406 | K | A | -1.0974 | |
| 407 | G | A | 0.0000 | |
| 408 | D | A | -2.7416 | |
| 409 | H | A | -2.7115 | |
| 410 | E | A | -3.0044 | |
| 411 | S | A | -2.1071 | |
| 412 | T | A | 0.0000 | |
| 413 | A | A | -0.3350 | |
| 414 | V | A | 0.0000 | |
| 415 | S | A | -0.4477 | |
| 416 | L | A | 0.0000 | |
| 417 | A | A | 0.0000 | |
| 418 | R | A | -1.1520 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.5778 | |
| 421 | E | A | -2.4509 | |
| 422 | E | A | -1.4783 | |
| 423 | L | A | -1.1989 | |
| 424 | N | A | -1.7629 | |
| 425 | T | A | -0.9083 | |
| 426 | I | A | -0.3157 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine