| Chain sequence(s) |
A: SMANKPMQPITSTANKIVWSDPTRLSTTFSASLLRQRVKVGELNNVSGQYVSVYKRPAPMPNENQSIRTVISGSAENLATLKAEWETHKRNVDTLFASGNAGLGFLDPTAAIVSSDTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | RQ33A,PI72A,VQ36A,RQ35A,QQ34A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 2.87552 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:01:12)
[INFO] FoldX: Starting FoldX energy minimalization (00:01:57)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:35)
[INFO] Main: Simulation completed successfully. (00:02:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| -1 | S | A | -0.0177 | |
| 0 | M | A | 1.0247 | |
| 1 | A | A | 0.0082 | |
| 2 | N | A | -1.4826 | |
| 3 | K | A | -1.4893 | |
| 4 | P | A | -0.4156 | |
| 5 | M | A | 0.0545 | |
| 6 | Q | A | -1.0336 | |
| 7 | P | A | 0.0170 | |
| 8 | I | A | 1.6884 | |
| 9 | T | A | 0.2371 | |
| 10 | S | A | -0.1628 | |
| 11 | T | A | -0.0907 | |
| 12 | A | A | -0.1891 | |
| 13 | N | A | -1.3917 | |
| 14 | K | A | -0.8385 | |
| 15 | I | A | 0.4411 | |
| 16 | V | A | 0.4121 | |
| 17 | W | A | 0.2922 | |
| 18 | S | A | 0.0000 | |
| 19 | D | A | 0.0000 | |
| 20 | P | A | -0.2256 | |
| 21 | T | A | -0.2484 | |
| 22 | R | A | -0.4774 | |
| 23 | L | A | 1.3905 | |
| 24 | S | A | 0.2018 | |
| 25 | T | A | 0.0165 | |
| 26 | T | A | 0.1395 | |
| 27 | F | A | 0.7993 | |
| 28 | S | A | 0.1679 | |
| 29 | A | A | 0.0423 | |
| 30 | S | A | -0.0540 | |
| 31 | L | A | 0.7782 | |
| 32 | L | A | 1.1330 | |
| 33 | Q | A | -1.0190 | mutated: RQ33A |
| 34 | Q | A | -1.0506 | mutated: QQ34A |
| 35 | Q | A | -1.4920 | mutated: RQ35A |
| 36 | Q | A | -1.2577 | mutated: VQ36A |
| 37 | K | A | -1.7514 | |
| 38 | V | A | 1.3717 | |
| 39 | G | A | -0.1413 | |
| 42 | E | A | -1.9894 | |
| 43 | L | A | -0.0408 | |
| 44 | N | A | -0.4830 | |
| 45 | N | A | 0.0000 | |
| 46 | V | A | 0.2542 | |
| 47 | S | A | 0.0244 | |
| 48 | G | A | 0.0000 | |
| 49 | Q | A | -0.4416 | |
| 50 | Y | A | 0.3575 | |
| 51 | V | A | 0.1257 | |
| 52 | S | A | 0.1270 | |
| 53 | V | A | 0.2658 | |
| 54 | Y | A | 0.2534 | |
| 55 | K | A | -1.0763 | |
| 56 | R | A | -1.4660 | |
| 57 | P | A | -0.5854 | |
| 58 | A | A | -0.0846 | |
| 59 | P | A | -0.2536 | |
| 71 | M | A | 1.4172 | |
| 72 | I | A | 2.0666 | mutated: PI72A |
| 73 | N | A | -0.8560 | |
| 74 | E | A | -2.0736 | |
| 75 | N | A | -1.8386 | |
| 76 | Q | A | -1.1729 | |
| 77 | S | A | 0.1532 | |
| 78 | I | A | 1.6673 | |
| 79 | R | A | -1.4447 | |
| 80 | T | A | -0.0752 | |
| 81 | V | A | 1.4415 | |
| 82 | I | A | 0.5320 | |
| 83 | S | A | -0.1679 | |
| 84 | G | A | -0.1212 | |
| 85 | S | A | -0.0338 | |
| 86 | A | A | -0.1912 | |
| 87 | E | A | -1.8998 | |
| 88 | N | A | -1.4135 | |
| 89 | L | A | 0.6631 | |
| 90 | A | A | 0.1968 | |
| 91 | T | A | -0.0138 | |
| 92 | L | A | -0.1535 | |
| 93 | K | A | -1.6517 | |
| 94 | A | A | -0.5494 | |
| 95 | E | A | -1.3140 | |
| 96 | W | A | -0.2316 | |
| 97 | E | A | -1.7445 | |
| 98 | T | A | -0.5551 | |
| 99 | H | A | -0.9353 | |
| 100 | K | A | -1.6439 | |
| 101 | R | A | -1.1497 | |
| 102 | N | A | -0.1744 | |
| 103 | V | A | 0.3725 | |
| 104 | D | A | -1.5921 | |
| 105 | T | A | -0.2761 | |
| 106 | L | A | 0.5277 | |
| 107 | F | A | 1.8848 | |
| 108 | A | A | 0.1295 | |
| 109 | S | A | -0.2389 | |
| 110 | G | A | -0.4498 | |
| 111 | N | A | -1.3095 | |
| 112 | A | A | 0.0608 | |
| 113 | G | A | -0.1856 | |
| 114 | L | A | 1.3796 | |
| 115 | G | A | 0.1718 | |
| 116 | F | A | 2.1385 | |
| 117 | L | A | 1.5932 | |
| 118 | D | A | -1.4224 | |
| 119 | P | A | -0.5729 | |
| 120 | T | A | -0.1145 | |
| 121 | A | A | 0.0109 | |
| 122 | A | A | 0.4141 | |
| 123 | I | A | 2.0984 | |
| 124 | V | A | 1.3866 | |
| 125 | S | A | -0.0353 | |
| 126 | S | A | -0.4663 | |
| 127 | D | A | -1.8206 | |
| 128 | T | A | -0.4092 | |
| 129 | T | A | -0.0835 |