| Chain sequence(s) |
A: CKGKGAKCSKLMYDCCTGSCRSGKC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:23)
[INFO] Main: Simulation completed successfully. (00:00:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.0358 | |
| 2 | K | A | -1.5576 | |
| 3 | G | A | -1.9179 | |
| 4 | K | A | -2.9702 | |
| 5 | G | A | -2.7089 | |
| 6 | A | A | -2.5997 | |
| 7 | K | A | -3.3243 | |
| 8 | C | A | -2.2070 | |
| 9 | S | A | -0.6661 | |
| 10 | K | A | -1.1415 | |
| 11 | L | A | 1.4292 | |
| 12 | M | A | 1.5868 | |
| 13 | Y | A | 0.7765 | |
| 14 | D | A | -0.3271 | |
| 15 | C | A | 0.0000 | |
| 16 | C | A | -0.1042 | |
| 17 | T | A | -0.5113 | |
| 18 | G | A | -0.9041 | |
| 19 | S | A | -0.9824 | |
| 20 | C | A | -2.0896 | |
| 21 | R | A | -3.2743 | |
| 22 | S | A | -2.2870 | |
| 23 | G | A | -2.7313 | |
| 24 | K | A | -4.0245 | |
| 25 | C | A | -3.0705 |