Project name: AL55

Status: done

Started: 2025-08-16 07:24:20
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Chain sequence(s) A: NFMLTQPHSVSESPGKTVTISCTRSSGSIASYYVQWYQLRPGSAPTTVIYEDNQRPSGVPDRFSGSIDRSSNSASLTVSELKTEDEADYYCQSYDSNNWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:42)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:43)
Show buried residues

Minimal score value
-3.251
Maximal score value
1.4855
Average score
-0.8276
Total score value
-178.768

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 N A -1.3134
2 F A 0.0000
3 M A 0.7424
4 L A 0.0000
5 T A 0.0392
6 Q A 0.0000
7 P A -0.7279
8 H A -1.2348
9 S A -0.8570
10 V A -0.4542
11 S A -0.6311
12 E A -1.0437
13 S A -1.4464
14 P A -2.0445
15 G A -2.5853
16 K A -2.9273
17 T A -1.8361
18 V A 0.0000
19 T A -0.1439
20 I A 0.0000
21 S A -0.2287
22 C A 0.0000
23 T A -0.1968
24 R A 0.0000
25 S A -0.2881
26 S A -0.5899
27 G A -0.7553
28 S A -1.0259
29 I A 0.0000
30 A A -0.5448
31 S A -0.1298
32 Y A 0.4793
33 Y A 0.5833
34 V A 0.0000
35 Q A -0.2467
36 W A 0.0000
37 Y A 0.3495
38 Q A 0.0000
39 L A -0.3538
40 R A -1.2001
41 P A -0.9127
42 G A -0.7950
43 S A -0.6114
44 A A -0.2952
45 P A -0.2880
46 T A -0.0724
47 T A -0.0008
48 V A 0.0000
49 I A 0.0000
50 Y A -1.0514
51 E A -1.5062
52 D A -1.3416
53 N A -2.2733
54 Q A -2.3915
55 R A -2.3835
56 P A -1.2132
57 S A -0.9735
58 G A -0.9270
59 V A -1.0412
60 P A -1.3591
61 D A -2.4142
62 R A -1.8481
63 F A 0.0000
64 S A -1.3762
65 G A -1.2427
66 S A -1.0115
67 I A -0.9315
68 D A -2.0466
69 R A -2.5610
70 S A -1.6079
71 S A -1.3043
72 N A -1.5391
73 S A 0.0000
74 A A 0.0000
75 S A -0.4973
76 L A 0.0000
77 T A -0.4089
78 V A 0.0000
79 S A -2.0808
80 E A -3.2428
81 L A 0.0000
82 K A -2.6117
83 T A -1.5674
84 E A -1.9571
85 D A 0.0000
86 E A -1.5788
87 A A 0.0000
88 D A -0.8660
89 Y A 0.0000
90 Y A 0.3759
91 C A 0.0000
92 Q A 0.0000
93 S A 0.0000
94 Y A 0.6878
95 D A -0.6938
96 S A -0.8886
97 N A -1.6958
98 N A -0.8520
99 W A 0.7985
100 V A 0.0000
101 F A 1.4855
102 G A 0.0000
103 G A -0.3208
104 G A 0.0000
105 T A 0.0000
106 K A -1.0030
107 L A 0.0000
108 T A 0.0000
109 V A 0.0000
110 L A -0.8700
111 G A -0.8676
112 Q A -1.1996
113 P A -1.2855
114 K A -2.2141
115 A A -1.3144
116 A A -0.7603
117 P A -0.4448
118 S A -0.2920
119 V A 0.0000
120 T A 0.0172
121 L A 0.0000
122 F A 1.1797
123 P A 0.2652
124 P A 0.0000
125 S A -1.0941
126 S A -1.8056
127 E A -2.8792
128 E A -2.6067
129 L A -2.3151
130 Q A -2.5703
131 A A -2.2337
132 N A -2.9241
133 K A -3.1091
134 A A 0.0000
135 T A -0.1340
136 L A 0.0000
137 V A 1.0311
138 C A 0.0000
139 L A 0.9078
140 I A 0.0000
141 S A -0.6468
142 D A -1.7529
143 F A 0.0000
144 Y A 0.0000
145 P A 0.0000
146 G A 0.0000
147 A A -0.3357
148 V A -0.1479
149 T A -0.1540
150 V A -0.0238
151 A A -0.4908
152 W A 0.0000
153 K A -1.1254
154 A A 0.0000
155 D A -1.3702
156 S A -0.9004
157 S A -0.7518
158 P A -0.8450
159 V A -0.8546
160 K A -1.8904
161 A A -1.0723
162 G A -0.9665
163 V A -1.0529
164 E A -1.8225
165 T A -0.6007
166 T A -0.5054
167 T A -0.4989
168 P A -0.5971
169 S A -1.3764
170 K A -2.6713
171 Q A -2.1841
172 S A -1.6570
173 N A -2.0421
174 N A -2.6070
175 K A -2.3797
176 Y A -1.6472
177 A A -0.8826
178 A A 0.0000
179 S A 0.1288
180 S A 0.0000
181 Y A 0.3450
182 L A 0.0000
183 S A -0.6637
184 L A -1.2225
185 T A -2.0212
186 P A 0.0000
187 E A -3.2510
188 Q A -2.4810
189 W A 0.0000
190 K A -3.1391
191 S A -2.4123
192 H A -2.3581
193 K A -2.4130
194 S A -1.7432
195 Y A 0.0000
196 S A 0.0000
197 C A 0.0000
198 Q A -1.0372
199 V A 0.0000
200 T A -0.5886
201 H A 0.0000
202 E A -1.7385
203 G A -1.1783
204 S A -0.7849
205 T A -0.7114
206 V A -0.8107
207 E A -2.0965
208 K A -1.5053
209 T A -0.8889
210 V A 0.0000
211 A A -1.4690
212 P A -1.5749
213 T A -1.5453
214 E A -1.8124
215 C A -0.7235
216 S A -0.8497
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Laboratory of Theory of Biopolymers 2018