| Chain sequence(s) |
A: SAVKALFDYKAQREDELTFTKSAIIQNVEKQDGGWWRGDYGGKKQLWFPSNYVEE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | KI14A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 0.0320469 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:04)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:04)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:04)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:04)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:04)
[INFO] FoldX: Building mutant model (00:00:46)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:57)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:14)
[INFO] Main: Simulation completed successfully. (00:01:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 5 | S | A | -0.3281 | |
| 6 | A | A | -0.1253 | |
| 7 | V | A | 0.0000 | |
| 8 | K | A | -0.6347 | |
| 9 | A | A | 0.0000 | |
| 10 | L | A | 0.5336 | |
| 11 | F | A | 0.6183 | |
| 12 | D | A | -1.8030 | |
| 13 | Y | A | 0.0000 | |
| 14 | I | A | 2.0116 | mutated: KI14A |
| 15 | A | A | 0.1443 | |
| 16 | Q | A | -1.5383 | |
| 17 | R | A | -2.4080 | |
| 18 | E | A | -2.3231 | |
| 19 | D | A | -1.2265 | |
| 20 | E | A | -0.2681 | |
| 21 | L | A | 0.0000 | |
| 22 | T | A | 0.2116 | |
| 23 | F | A | 0.0000 | |
| 24 | T | A | -0.6546 | |
| 25 | K | A | -1.8105 | |
| 26 | S | A | -0.5220 | |
| 27 | A | A | 0.0000 | |
| 28 | I | A | 1.9094 | |
| 29 | I | A | 0.0000 | |
| 30 | Q | A | -1.1219 | |
| 31 | N | A | -1.4139 | |
| 32 | V | A | -0.3465 | |
| 33 | E | A | -1.9702 | |
| 34 | K | A | -2.0699 | |
| 35 | Q | A | -1.0058 | |
| 36 | D | A | -1.9434 | |
| 37 | G | A | -0.8625 | |
| 38 | G | A | -0.3327 | |
| 39 | W | A | 0.3366 | |
| 40 | W | A | -0.0526 | |
| 41 | R | A | -0.3831 | |
| 42 | G | A | 0.0000 | |
| 43 | D | A | -0.4801 | |
| 44 | Y | A | 0.2375 | |
| 45 | G | A | -0.4843 | |
| 46 | G | A | -0.6681 | |
| 47 | K | A | -1.0331 | |
| 48 | K | A | -1.8979 | |
| 49 | Q | A | -0.5984 | |
| 50 | L | A | 0.1480 | |
| 51 | W | A | 0.2456 | |
| 52 | F | A | 0.0000 | |
| 53 | P | A | 0.0000 | |
| 54 | S | A | -0.2683 | |
| 55 | N | A | -1.2175 | |
| 56 | Y | A | 0.1080 | |
| 57 | V | A | 0.0000 | |
| 58 | E | A | -2.1490 | |
| 59 | E | A | -2.1490 |