| Chain sequence(s) |
B: SLEALVYELMEKMYFDPWEAWKINGGSRRVTHMTGKEVYEIARKVAEERLKKEE
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:53)
[INFO] Main: Simulation completed successfully. (00:01:54)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -0.4170 | |
| 2 | L | B | -0.7995 | |
| 3 | E | B | -1.6634 | |
| 4 | A | B | -0.6371 | |
| 5 | L | B | -0.7100 | |
| 6 | V | B | 0.0000 | |
| 7 | Y | B | -0.3728 | |
| 8 | E | B | -1.8661 | |
| 9 | L | B | 0.0000 | |
| 10 | M | B | -0.7317 | |
| 11 | E | B | -1.7888 | |
| 12 | K | B | -1.2346 | |
| 13 | M | B | 0.0000 | |
| 14 | Y | B | -0.0171 | |
| 15 | F | B | 1.1775 | |
| 16 | D | B | -0.1791 | |
| 17 | P | B | -0.4740 | |
| 18 | W | B | 0.3052 | |
| 19 | E | B | -0.7872 | |
| 20 | A | B | 0.0000 | |
| 21 | W | B | -1.0920 | |
| 22 | K | B | -1.6173 | |
| 23 | I | B | -0.8300 | |
| 24 | N | B | -1.2150 | |
| 25 | G | B | -1.3196 | |
| 26 | G | B | -1.4192 | |
| 27 | S | B | -1.9033 | |
| 28 | R | B | -3.0371 | |
| 29 | R | B | -3.0184 | |
| 30 | V | B | 0.0000 | |
| 31 | T | B | -1.0609 | |
| 32 | H | B | -1.9149 | |
| 33 | M | B | -1.4038 | |
| 34 | T | B | -1.3179 | |
| 35 | G | B | -1.6869 | |
| 36 | K | B | -2.4598 | |
| 37 | E | B | -2.3540 | |
| 38 | V | B | 0.0000 | |
| 39 | Y | B | -0.9982 | |
| 40 | E | B | -1.8174 | |
| 41 | I | B | -1.1047 | |
| 42 | A | B | 0.0000 | |
| 43 | R | B | -2.1002 | |
| 44 | K | B | -2.6678 | |
| 45 | V | B | -1.8461 | |
| 46 | A | B | 0.0000 | |
| 47 | E | B | -3.1714 | |
| 48 | E | B | -3.8438 | |
| 49 | R | B | -3.7390 | |
| 50 | L | B | -3.0178 | |
| 51 | K | B | -4.5054 | |
| 52 | K | B | -4.6349 | |
| 53 | E | B | -4.3356 | |
| 54 | E | B | -3.8119 |