Project name: 1pga

Status: done

Started: 2026-04-08 11:13:41
Settings
Chain sequence(s) A: MTYKLILNGKTLKGETTTEAVDAATAEKVFKQYANDNGVDGEWTYDDATKTFTVTE
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:07)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:07)
Show buried residues

Minimal score value
-3.5756
Maximal score value
1.1817
Average score
-1.3318
Total score value
-74.5797

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.6646
2 T A -0.3837
3 Y A 0.0000
4 K A -1.1545
5 L A 0.0000
6 I A -0.6916
7 L A 0.0000
8 N A -2.6819
9 G A 0.0000
10 K A -2.8176
11 T A -1.6202
12 L A -1.8442
13 K A -2.6115
14 G A -1.9344
15 E A -2.2390
16 T A -1.0041
17 T A -1.0651
18 T A -0.7764
19 E A -1.2320
20 A A -0.0945
21 V A 1.1817
22 D A -0.2790
23 A A -0.8958
24 A A -0.4554
25 T A -0.5635
26 A A 0.0000
27 E A -1.4303
28 K A -1.8729
29 V A -0.5474
30 F A 0.0000
31 K A -2.5506
32 Q A -2.6081
33 Y A -1.5965
34 A A 0.0000
35 N A -3.4371
36 D A -3.4928
37 N A -2.8075
38 G A -2.5447
39 V A 0.0000
40 D A -3.5756
41 G A -3.1105
42 E A -2.6189
43 W A -1.1074
44 T A -0.7052
45 Y A -1.0893
46 D A -2.4812
47 D A -2.6777
48 A A -1.4608
49 T A -1.3673
50 K A -1.7276
51 T A -1.2591
52 F A 0.0000
53 T A -0.6445
54 V A 0.0000
55 T A -2.4159
56 E A -2.9527
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Laboratory of Theory of Biopolymers 2018