Project name: ELK-GFP

Status: done

Started: 2025-07-17 10:28:57
Settings
Chain sequence(s) A: LELELKLKLELELKLKENLYFQGRGSGSESDESGLPAMEIECRITGTLNGVEFELVGGGEGTPEQGRMTNKMKSTKGALTFSPYLLSHVMGYGFYHFGTYPSGYENPFLHAINNGGYTNTRIEKYEDGGVLHVSFSYRYEAGRVIGDFKVMGTGFPEDSVIFTDKIIRSNATVEHLHPMGDNDLDGSFTRTFSLRDGGYYSSVVDSHMHFKSAIHPSILQNGGPMFAFRRVEEDHSNTELGIVEYQHAFKTPDADAGEE
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:05)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:07)
Show buried residues

Minimal score value
-3.3571
Maximal score value
1.0179
Average score
-0.8312
Total score value
-215.2896

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L A 0.7086
2 E A -0.7349
3 L A 0.5356
4 E A -0.7168
5 L A 0.4260
6 K A -0.8027
7 L A 0.3055
8 K A -0.7578
9 L A 0.5330
10 E A -0.7982
11 L A 0.2311
12 E A -0.8787
13 L A 0.1694
14 K A -1.2667
15 L A 0.2391
16 K A -0.5257
17 E A -0.6331
18 N A -0.2974
19 L A 0.9022
20 Y A 1.0161
21 F A 0.1606
22 Q A -1.2898
23 G A -1.0872
24 R A -2.2847
25 G A -2.0051
26 S A -1.2708
27 G A -1.4854
28 S A -1.7559
29 E A -2.7172
30 S A -2.5881
31 D A -3.3571
32 E A -2.9957
33 S A -1.6502
34 G A -1.2710
35 L A 0.3484
36 P A -0.1814
37 A A -1.2828
38 M A -1.3992
39 E A -2.9858
40 I A 0.0000
41 E A -2.4856
42 C A 0.0000
43 R A -2.2625
44 I A 0.0000
45 T A -1.3295
46 G A 0.0000
47 T A -0.8213
48 L A 0.0000
49 N A -1.2316
50 G A -0.7277
51 V A -0.1816
52 E A -1.8048
53 F A 0.0000
54 E A -1.6885
55 L A 0.0000
56 V A -1.2440
57 G A -1.6479
58 G A -2.0981
59 G A -2.2287
60 E A -3.0630
61 G A 0.0000
62 T A -1.7344
63 P A 0.0000
64 E A -2.4658
65 Q A -2.6597
66 G A 0.0000
67 R A -2.0858
68 M A 0.0000
69 T A -1.4619
70 N A 0.0000
71 K A -2.9745
72 M A 0.0000
73 K A -3.1635
74 S A 0.0000
75 T A -1.5015
76 K A -2.5162
77 G A -1.6326
78 A A -1.3417
79 L A 0.0000
80 T A -0.1488
81 F A 0.0000
82 S A 0.0000
83 P A -0.8405
84 Y A -0.3410
85 L A 0.0000
86 L A 0.0000
87 S A 0.0000
88 H A 0.0000
89 V A 0.0000
90 M A 0.0000
91 G A 0.0000
92 Y A 0.0000
93 G A 0.0000
94 F A 0.0000
95 Y A 0.0000
96 H A 0.0000
97 F A 0.0000
98 G A 0.0000
99 T A -0.9517
100 Y A -0.2332
101 P A -0.1718
102 S A -0.4236
103 G A -0.6729
104 Y A -0.6297
105 E A -1.0583
106 N A 0.0000
107 P A 0.0000
108 F A 0.0000
109 L A -0.0963
110 H A -0.6811
111 A A 0.0000
112 I A -0.7604
113 N A -1.4292
114 N A -1.7372
115 G A -1.7489
116 G A 0.0000
117 Y A 0.0000
118 T A -0.5915
119 N A 0.0000
120 T A -0.7356
121 R A 0.0000
122 I A 0.0442
123 E A 0.0000
124 K A -1.2233
125 Y A 0.0000
126 E A -2.2219
127 D A -2.1042
128 G A -1.6782
129 G A 0.0000
130 V A -0.5000
131 L A 0.0000
132 H A -0.4085
133 V A 0.0000
134 S A -0.8467
135 F A 0.0000
136 S A -1.1208
137 Y A -1.0700
138 R A -2.3959
139 Y A -1.8775
140 E A -2.4737
141 A A -1.3327
142 G A -1.5516
143 R A -2.6853
144 V A 0.0000
145 I A -2.0355
146 G A 0.0000
147 D A -2.4809
148 F A 0.0000
149 K A -1.9631
150 V A 0.0000
151 M A -0.1175
152 G A 0.0000
153 T A -0.4853
154 G A -1.2072
155 F A 0.0000
156 P A -1.9220
157 E A -2.7592
158 D A -2.6074
159 S A 0.0000
160 V A -0.8716
161 I A 0.0000
162 F A -0.5947
163 T A -1.0769
164 D A -2.1112
165 K A -2.2759
166 I A 0.0000
167 I A -0.8847
168 R A -1.6241
169 S A 0.0000
170 N A -0.4809
171 A A -0.3199
172 T A 0.2928
173 V A 1.0179
174 E A 0.0000
175 H A -0.2373
176 L A 0.0000
177 H A -0.5081
178 P A -0.5445
179 M A 0.1210
180 G A -0.8789
181 D A -2.1327
182 N A -1.7321
183 D A -1.3487
184 L A 0.0000
185 D A -1.1262
186 G A 0.0000
187 S A -0.4580
188 F A 0.0000
189 T A 0.3811
190 R A 0.0000
191 T A 0.3104
192 F A 0.0000
193 S A -0.5432
194 L A -1.5178
195 R A -3.0900
196 D A -2.7712
197 G A -1.6357
198 G A -0.7141
199 Y A 0.5775
200 Y A 0.0000
201 S A -0.1716
202 S A 0.0000
203 V A 0.8034
204 V A 0.0000
205 D A -1.4639
206 S A 0.0000
207 H A -1.1881
208 M A 0.0000
209 H A -1.3042
210 F A 0.0000
211 K A -2.3999
212 S A -1.8508
213 A A -1.4519
214 I A 0.0000
215 H A -0.9976
216 P A -0.9264
217 S A -0.8282
218 I A 0.0000
219 L A -0.8614
220 Q A -1.3004
221 N A -1.0069
222 G A -0.9594
223 G A -0.7305
224 P A -0.3919
225 M A 0.0000
226 F A 0.7409
227 A A 0.0000
228 F A 0.0000
229 R A 0.0000
230 R A -0.7278
231 V A 0.0000
232 E A -2.2150
233 E A -2.2428
234 D A -2.9540
235 H A -2.2154
236 S A -1.7663
237 N A -1.5884
238 T A -2.1504
239 E A -3.3390
240 L A 0.0000
241 G A 0.0000
242 I A 0.0000
243 V A -1.2131
244 E A 0.0000
245 Y A -0.7877
246 Q A 0.0000
247 H A -0.1410
248 A A 0.5450
249 F A 0.7117
250 K A -0.3548
251 T A -0.6440
252 P A -1.4414
253 D A -2.4932
254 A A -1.8231
255 D A -2.7464
256 A A -2.0964
257 G A -2.4334
258 E A -3.2036
259 E A -2.8305
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Laboratory of Theory of Biopolymers 2018