| Chain sequence(s) |
A: MAEVQLQASGGGFVQPGGSLRLSCAASGTTSFGNTMGWDRIAPGKNREFVSAISRQGDDSHHYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAPYYCIEWMNTRREFITVYGGQGTVVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:13)
[INFO] Main: Simulation completed successfully. (00:02:14)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5234 | |
| 2 | A | A | -0.6191 | |
| 3 | E | A | -1.8736 | |
| 4 | V | A | -1.3225 | |
| 5 | Q | A | -2.0181 | |
| 6 | L | A | 0.0000 | |
| 7 | Q | A | -1.7351 | |
| 8 | A | A | -0.8469 | |
| 9 | S | A | -0.7317 | |
| 10 | G | A | -0.6894 | |
| 11 | G | A | 0.2682 | |
| 12 | G | A | 0.9293 | |
| 13 | F | A | 1.7511 | |
| 14 | V | A | 0.0000 | |
| 15 | Q | A | -1.3838 | |
| 16 | P | A | -1.6632 | |
| 17 | G | A | -1.4602 | |
| 18 | G | A | -0.9736 | |
| 19 | S | A | -1.1460 | |
| 20 | L | A | -0.9517 | |
| 21 | R | A | -2.2482 | |
| 22 | L | A | 0.0000 | |
| 23 | S | A | -0.8523 | |
| 24 | C | A | 0.0000 | |
| 25 | A | A | -1.1714 | |
| 26 | A | A | -1.2359 | |
| 27 | S | A | -1.5534 | |
| 28 | G | A | -1.1743 | |
| 29 | T | A | -0.5875 | |
| 30 | T | A | -0.4750 | |
| 31 | S | A | -0.5394 | |
| 32 | F | A | -1.0069 | |
| 33 | G | A | -1.2113 | |
| 34 | N | A | -1.0888 | |
| 35 | T | A | -0.8288 | |
| 36 | M | A | 0.0000 | |
| 37 | G | A | 0.0000 | |
| 38 | W | A | 0.0000 | |
| 39 | D | A | 0.0000 | |
| 40 | R | A | 0.0000 | |
| 41 | I | A | -0.8483 | |
| 42 | A | A | -1.4787 | |
| 43 | P | A | -1.2425 | |
| 44 | G | A | -1.7538 | |
| 45 | K | A | -2.9603 | |
| 46 | N | A | -2.9386 | |
| 47 | R | A | -2.4886 | |
| 48 | E | A | -1.6651 | |
| 49 | F | A | -0.4735 | |
| 50 | V | A | 0.0000 | |
| 51 | S | A | 0.0000 | |
| 52 | A | A | 0.0000 | |
| 53 | I | A | 0.0000 | |
| 54 | S | A | -2.1160 | |
| 55 | R | A | -2.9778 | |
| 56 | Q | A | -2.8573 | |
| 57 | G | A | -2.9051 | |
| 58 | D | A | -3.4064 | |
| 59 | D | A | -3.2564 | |
| 60 | S | A | -2.6064 | |
| 61 | H | A | -2.0023 | |
| 62 | H | A | -1.7266 | |
| 63 | Y | A | -1.3587 | |
| 64 | A | A | -1.5190 | |
| 65 | D | A | -2.5299 | |
| 66 | S | A | -1.7557 | |
| 67 | V | A | 0.0000 | |
| 68 | K | A | -2.7302 | |
| 69 | G | A | -1.7059 | |
| 70 | R | A | -1.4306 | |
| 71 | F | A | 0.0000 | |
| 72 | T | A | -1.0985 | |
| 73 | I | A | 0.0000 | |
| 74 | S | A | -0.9602 | |
| 75 | R | A | -1.5055 | |
| 76 | D | A | -2.1668 | |
| 77 | N | A | -2.7039 | |
| 78 | S | A | -2.0210 | |
| 79 | K | A | -2.6957 | |
| 80 | N | A | -2.1972 | |
| 81 | T | A | 0.0000 | |
| 82 | V | A | 0.0000 | |
| 83 | Y | A | -0.7098 | |
| 84 | L | A | 0.0000 | |
| 85 | Q | A | -1.5681 | |
| 86 | M | A | 0.0000 | |
| 87 | N | A | -1.3719 | |
| 88 | S | A | -1.2161 | |
| 89 | L | A | 0.0000 | |
| 90 | R | A | -2.4151 | |
| 91 | A | A | -1.7972 | |
| 92 | E | A | -2.2696 | |
| 93 | D | A | 0.0000 | |
| 94 | T | A | -0.2938 | |
| 95 | A | A | 0.0000 | |
| 96 | P | A | 0.6813 | |
| 97 | Y | A | 0.0000 | |
| 98 | Y | A | 0.0673 | |
| 99 | C | A | 0.0000 | |
| 100 | I | A | 0.0000 | |
| 101 | E | A | 0.0000 | |
| 102 | W | A | 0.7681 | |
| 103 | M | A | 0.0000 | |
| 104 | N | A | -1.5250 | |
| 105 | T | A | -1.8949 | |
| 106 | R | A | -3.1330 | |
| 107 | R | A | -3.1739 | |
| 108 | E | A | -1.9449 | |
| 109 | F | A | 0.5741 | |
| 110 | I | A | 0.9070 | |
| 111 | T | A | 0.8841 | |
| 112 | V | A | 0.6955 | |
| 113 | Y | A | 0.4539 | |
| 114 | G | A | 0.0000 | |
| 115 | G | A | -1.2954 | |
| 116 | Q | A | -1.3319 | |
| 117 | G | A | -0.4969 | |
| 118 | T | A | 0.1568 | |
| 119 | V | A | 1.7667 | |
| 120 | V | A | 0.0000 | |
| 121 | T | A | 0.4558 | |
| 122 | V | A | 0.0000 | |
| 123 | S | A | -0.4935 | |
| 124 | S | A | -0.4599 |