| Chain sequence(s) |
L: TKPAIRRLARRGGV
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:12)
[INFO] Main: Simulation completed successfully. (00:00:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 377 | T | L | -0.3832 | |
| 378 | K | L | -1.7532 | |
| 379 | P | L | -0.5259 | |
| 380 | A | L | 0.3200 | |
| 381 | I | L | 1.7225 | |
| 382 | R | L | -1.4620 | |
| 383 | R | L | -1.7788 | |
| 384 | L | L | 1.3883 | |
| 385 | A | L | -0.1621 | |
| 386 | R | L | -2.1763 | |
| 387 | R | L | -2.2736 | |
| 388 | G | L | -0.8946 | |
| 389 | G | L | -0.2248 | |
| 390 | V | L | 1.6865 |