| Chain sequence(s) |
A: MSHHHHHHSGLLEELKEKIKKVMEKGLEKLKEVYATGKPGWKIYDEILEVLEEMLEEIKKVLEEYAPKLNLPGWEEKFPELKEEMMRTFHKFFFDHGLFYAPSDYELEEAFEKMFKVIEEFIEELLKESNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:10:08)
[INFO] Main: Simulation completed successfully. (00:10:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.2418 | |
| 2 | S | A | -1.1038 | |
| 3 | H | A | -2.1308 | |
| 4 | H | A | -2.4669 | |
| 5 | H | A | -2.6422 | |
| 6 | H | A | -2.8081 | |
| 7 | H | A | -2.7630 | |
| 8 | H | A | -2.7418 | |
| 9 | S | A | -2.1358 | |
| 10 | G | A | -2.2131 | |
| 11 | L | A | -2.2092 | |
| 12 | L | A | -2.5159 | |
| 13 | E | A | -3.5147 | |
| 14 | E | A | -3.8128 | |
| 15 | L | A | 0.0000 | |
| 16 | K | A | -3.1305 | |
| 17 | E | A | -4.1282 | |
| 18 | K | A | -3.5961 | |
| 19 | I | A | 0.0000 | |
| 20 | K | A | -3.3489 | |
| 21 | K | A | -3.1743 | |
| 22 | V | A | 0.0000 | |
| 23 | M | A | 0.0000 | |
| 24 | E | A | -3.7581 | |
| 25 | K | A | -3.6339 | |
| 26 | G | A | 0.0000 | |
| 27 | L | A | -3.0974 | |
| 28 | E | A | -4.2180 | |
| 29 | K | A | -3.5603 | |
| 30 | L | A | 0.0000 | |
| 31 | K | A | -3.0966 | |
| 32 | E | A | -2.9169 | |
| 33 | V | A | -1.9271 | |
| 34 | Y | A | 0.0000 | |
| 35 | A | A | -1.3976 | |
| 36 | T | A | -0.9646 | |
| 37 | G | A | -0.9269 | |
| 38 | K | A | -0.8682 | |
| 39 | P | A | 0.5726 | |
| 40 | G | A | 0.0000 | |
| 41 | W | A | 1.0304 | |
| 42 | K | A | -1.3277 | |
| 43 | I | A | 0.0000 | |
| 44 | Y | A | -1.0717 | |
| 45 | D | A | -2.7999 | |
| 46 | E | A | -3.3924 | |
| 47 | I | A | 0.0000 | |
| 48 | L | A | -2.2472 | |
| 49 | E | A | -3.7331 | |
| 50 | V | A | 0.0000 | |
| 51 | L | A | 0.0000 | |
| 52 | E | A | -4.1429 | |
| 53 | E | A | -4.1831 | |
| 54 | M | A | 0.0000 | |
| 55 | L | A | 0.0000 | |
| 56 | E | A | -4.3145 | |
| 57 | E | A | -4.0232 | |
| 58 | I | A | 0.0000 | |
| 59 | K | A | -3.7416 | |
| 60 | K | A | -3.9964 | |
| 61 | V | A | 0.0000 | |
| 62 | L | A | 0.0000 | |
| 63 | E | A | -4.0822 | |
| 64 | E | A | -3.5004 | |
| 65 | Y | A | -2.5313 | |
| 66 | A | A | 0.0000 | |
| 67 | P | A | -2.2691 | |
| 68 | K | A | -2.7982 | |
| 69 | L | A | 0.0000 | |
| 70 | N | A | -2.3129 | |
| 71 | L | A | 0.0000 | |
| 72 | P | A | -1.6754 | |
| 73 | G | A | -2.1665 | |
| 74 | W | A | 0.0000 | |
| 75 | E | A | -3.6143 | |
| 76 | E | A | -3.4515 | |
| 77 | K | A | -2.8960 | |
| 78 | F | A | 0.0000 | |
| 79 | P | A | -2.8727 | |
| 80 | E | A | -3.7304 | |
| 81 | L | A | 0.0000 | |
| 82 | K | A | -3.3870 | |
| 83 | E | A | -3.7328 | |
| 84 | E | A | -3.4817 | |
| 85 | M | A | 0.0000 | |
| 86 | M | A | -2.5747 | |
| 87 | R | A | -3.3044 | |
| 88 | T | A | -2.4340 | |
| 89 | F | A | 0.0000 | |
| 90 | H | A | -1.4215 | |
| 91 | K | A | -2.0823 | |
| 92 | F | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | F | A | 0.9049 | |
| 95 | D | A | -1.0584 | |
| 96 | H | A | -0.2867 | |
| 97 | G | A | 0.0000 | |
| 98 | L | A | 1.7753 | |
| 99 | F | A | 2.4587 | |
| 100 | Y | A | 1.4233 | |
| 101 | A | A | 0.1571 | |
| 102 | P | A | 0.0000 | |
| 103 | S | A | -0.8376 | |
| 104 | D | A | -2.2096 | |
| 105 | Y | A | -0.6635 | |
| 106 | E | A | -1.6943 | |
| 107 | L | A | 0.0000 | |
| 108 | E | A | -3.4054 | |
| 109 | E | A | -3.3859 | |
| 110 | A | A | 0.0000 | |
| 111 | F | A | 0.0000 | |
| 112 | E | A | -3.9905 | |
| 113 | K | A | -3.4394 | |
| 114 | M | A | 0.0000 | |
| 115 | F | A | -2.1156 | |
| 116 | K | A | -2.4212 | |
| 117 | V | A | -2.1284 | |
| 118 | I | A | 0.0000 | |
| 119 | E | A | -2.5091 | |
| 120 | E | A | -3.2981 | |
| 121 | F | A | 0.0000 | |
| 122 | I | A | 0.0000 | |
| 123 | E | A | -4.0384 | |
| 124 | E | A | -4.2379 | |
| 125 | L | A | 0.0000 | |
| 126 | L | A | -3.1954 | |
| 127 | K | A | -4.0752 | |
| 128 | E | A | -3.9986 | |
| 129 | S | A | -2.9055 | |
| 130 | N | A | -2.6533 | |
| 131 | S | A | -1.8537 |