Project name: testlan

Status: done

Started: 2026-03-27 14:09:51
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Chain sequence(s) A: CYWKVCT
C: CYWKVCT
B: CYWKVCT
E: CYWKVCT
D: CYWKVCT
G: CYWKVCT
F: CYWKVCT
H: CYWKVCT
input PDB
Selected Chain(s) A,C,B,E,D,G,F,H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:36)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:38)
Show buried residues

Minimal score value
-1.1085
Maximal score value
1.1254
Average score
0.2825
Total score value
15.8204

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
2 C A 0.8882
3 Y A 0.8068
4 W A 0.8549
5 K A -0.8322
6 V A 0.0000
7 C A 0.3760
8 T A -0.1381
102 C B 0.9225
103 Y B 0.7366
104 W B 0.8632
105 K B -0.7834
106 V B 0.0000
107 C B 0.4914
108 T B 0.0807
202 C C 0.9935
203 Y C 1.0883
204 W C 1.1254
205 K C -0.2617
206 V C 0.0000
207 C C 0.4722
208 T C 0.0002
302 C D 0.8409
303 Y D 0.0000
304 W D 0.2289
305 K D -1.1085
306 V D 0.0000
307 C D 0.3515
308 T D -0.0377
402 C E 0.9053
403 Y E 0.7398
404 W E 0.8185
405 K E -0.7648
406 V E 0.1907
407 C E 0.4182
408 T E 0.1236
502 C F 0.8389
503 Y F 0.8801
504 W F 0.8319
505 K F -0.8460
506 V F 0.0000
507 C F 0.2838
508 T F 0.0744
602 C G 0.6232
603 Y G 0.0000
604 W G 0.8341
605 K G -0.6205
606 V G 0.0000
607 C G 0.1855
608 T G -0.1417
702 C H 0.9520
703 Y H 0.8300
704 W H 0.8839
705 K H -0.8137
706 V H 0.0000
707 C H 0.4688
708 T H 0.1648
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Laboratory of Theory of Biopolymers 2018