| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFEDIVVNGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPVHCGPDDRVAFSWDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRCGPDGVPLPSSPPPSPLYTPPPPSSPYAVPPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPENNVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9479 | |
| 2 | L | A | 1.9712 | |
| 3 | P | A | 0.6567 | |
| 4 | P | A | 0.3743 | |
| 5 | T | A | 0.1209 | |
| 6 | T | A | 0.1281 | |
| 7 | P | A | 0.1784 | |
| 8 | V | A | 1.2199 | |
| 9 | A | A | 0.0350 | |
| 10 | K | A | -1.1500 | |
| 11 | V | A | -0.3928 | |
| 12 | Q | A | -1.5200 | |
| 13 | S | A | -1.6084 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4594 | |
| 16 | E | A | -2.4579 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4541 | |
| 20 | P | A | 0.1025 | |
| 21 | T | A | 0.1154 | |
| 22 | S | A | -0.1701 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1006 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1457 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.6703 | |
| 31 | R | A | -2.5741 | |
| 32 | L | A | -0.7289 | |
| 33 | L | A | 1.2435 | |
| 34 | T | A | 1.4736 | |
| 35 | V | A | 2.0240 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2464 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6763 | |
| 40 | E | A | -1.7944 | |
| 41 | D | A | -0.7187 | |
| 42 | I | A | 1.2741 | |
| 43 | V | A | 2.3591 | |
| 44 | V | A | 1.9230 | |
| 45 | N | A | -0.3487 | |
| 46 | G | A | -0.2558 | |
| 47 | K | A | 0.0197 | |
| 48 | V | A | 2.1979 | |
| 49 | V | A | 2.8229 | |
| 50 | V | A | 1.6533 | |
| 51 | P | A | 0.4229 | |
| 52 | K | A | -0.6735 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1237 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4815 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3024 | |
| 70 | K | A | -1.8188 | |
| 71 | F | A | -0.6767 | |
| 72 | A | A | -0.5826 | |
| 73 | L | A | -0.9413 | |
| 74 | P | A | -1.2665 | |
| 75 | Q | A | -2.4755 | |
| 76 | K | A | -3.0942 | |
| 77 | D | A | -2.9925 | |
| 78 | F | A | -1.6492 | |
| 79 | Y | A | -1.9264 | |
| 80 | D | A | -2.7674 | |
| 81 | P | A | -2.3575 | |
| 82 | E | A | -3.0736 | |
| 83 | K | A | -3.4434 | |
| 84 | E | A | -2.5043 | |
| 85 | R | A | -1.3150 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6477 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9756 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3244 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6744 | |
| 99 | G | A | -0.5344 | |
| 100 | P | A | -0.4157 | |
| 101 | L | A | 0.0158 | |
| 102 | G | A | -0.2479 | |
| 103 | K | A | -0.6737 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4468 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1519 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4424 | |
| 110 | L | A | 0.3252 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0993 | |
| 113 | K | A | -0.4119 | |
| 114 | L | A | -0.6921 | |
| 115 | G | A | -0.7825 | |
| 116 | D | A | -1.4760 | |
| 117 | T | A | -1.2824 | |
| 118 | E | A | -2.5904 | |
| 119 | N | A | -2.4446 | |
| 120 | P | A | -1.5553 | |
| 121 | T | A | -0.7517 | |
| 122 | A | A | -0.3155 | |
| 123 | P | A | 0.0559 | |
| 124 | V | A | 0.2181 | |
| 125 | H | A | -0.2822 | |
| 126 | C | A | -0.5806 | |
| 127 | G | A | -1.0867 | |
| 128 | P | A | -1.4523 | |
| 129 | D | A | -2.2565 | |
| 130 | D | A | -1.7712 | |
| 131 | R | A | -1.1748 | |
| 132 | V | A | 0.2116 | |
| 133 | A | A | 0.4609 | |
| 134 | F | A | 0.3035 | |
| 135 | S | A | -0.0659 | |
| 136 | W | A | 0.0000 | |
| 137 | D | A | -0.6785 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5698 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2722 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0930 | |
| 157 | D | A | 0.2333 | |
| 158 | L | A | 0.7318 | |
| 159 | A | A | 0.1348 | |
| 160 | E | A | -1.4629 | |
| 161 | P | A | -0.2323 | |
| 162 | C | A | 0.1823 | |
| 163 | P | A | -0.1698 | |
| 164 | G | A | -0.0792 | |
| 165 | L | A | 0.5789 | |
| 166 | P | A | -0.1181 | |
| 167 | P | A | -0.3419 | |
| 168 | G | A | -0.4227 | |
| 169 | A | A | 0.2888 | |
| 170 | C | A | 1.0052 | |
| 171 | P | A | 0.5001 | |
| 172 | P | A | 0.7495 | |
| 173 | I | A | 1.9301 | |
| 174 | Q | A | 0.8035 | |
| 175 | L | A | 1.4551 | |
| 176 | V | A | 0.8275 | |
| 177 | N | A | -0.3568 | |
| 178 | S | A | -0.0045 | |
| 179 | V | A | 0.3636 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3546 | |
| 182 | D | A | 0.0620 | |
| 183 | G | A | -0.1655 | |
| 184 | D | A | -0.5913 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1650 | |
| 190 | F | A | 0.0652 | |
| 191 | G | A | -0.1011 | |
| 192 | N | A | -0.3071 | |
| 193 | M | A | -0.1991 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4917 | |
| 197 | E | A | -2.7456 | |
| 198 | L | A | -1.3103 | |
| 199 | Q | A | -2.5857 | |
| 200 | Q | A | -3.3623 | |
| 201 | D | A | -3.6128 | |
| 202 | R | A | -3.3570 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1596 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.4028 | |
| 211 | S | A | -1.9577 | |
| 212 | T | A | -1.5456 | |
| 213 | R | A | -2.2891 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1900 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2629 | |
| 220 | L | A | 0.4529 | |
| 221 | K | A | -1.4083 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9928 | |
| 224 | N | A | -1.6065 | |
| 225 | E | A | -1.3416 | |
| 226 | A | A | -0.6685 | |
| 227 | Y | A | -0.4599 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7248 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1333 | |
| 234 | F | A | 0.0383 | |
| 235 | G | A | -0.8927 | |
| 236 | R | A | -2.6192 | |
| 237 | R | A | -2.8150 | |
| 238 | E | A | -2.0574 | |
| 239 | Q | A | -0.0991 | |
| 240 | V | A | 1.5547 | |
| 241 | Y | A | 1.2358 | |
| 242 | A | A | 0.1526 | |
| 243 | R | A | -1.1606 | |
| 244 | H | A | -1.2186 | |
| 245 | F | A | -0.3127 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.5877 | |
| 249 | C | A | -0.8520 | |
| 250 | G | A | -0.9124 | |
| 251 | P | A | -0.5100 | |
| 252 | D | A | -0.4258 | |
| 253 | G | A | 0.0429 | |
| 254 | V | A | 1.3050 | |
| 255 | P | A | 0.4868 | |
| 256 | L | A | 0.8132 | |
| 257 | P | A | 0.4312 | |
| 258 | S | A | -0.1747 | |
| 259 | S | A | -0.2460 | |
| 260 | P | A | -0.6194 | |
| 261 | P | A | -0.4727 | |
| 262 | P | A | -0.3335 | |
| 263 | S | A | 0.1413 | |
| 264 | P | A | 0.4309 | |
| 265 | L | A | 1.5580 | |
| 266 | Y | A | 0.9723 | |
| 267 | T | A | 0.1133 | |
| 268 | P | A | 0.0658 | |
| 269 | P | A | 0.0441 | |
| 270 | P | A | -0.4361 | |
| 271 | P | A | -0.1768 | |
| 272 | S | A | -0.3533 | |
| 273 | S | A | 0.1352 | |
| 274 | P | A | 0.3265 | |
| 275 | Y | A | 1.1748 | |
| 276 | A | A | 0.9755 | |
| 277 | V | A | 1.7788 | |
| 278 | P | A | 0.9430 | |
| 279 | P | A | 0.2153 | |
| 280 | P | A | -0.2508 | |
| 281 | T | A | -0.2429 | |
| 282 | D | A | -0.7249 | |
| 283 | Y | A | 0.7528 | |
| 284 | F | A | 0.6632 | |
| 285 | G | A | 0.1074 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9320 | |
| 291 | L | A | 1.6195 | |
| 292 | V | A | 0.6124 | |
| 293 | S | A | -0.1697 | |
| 294 | S | A | -0.9704 | |
| 295 | D | A | -1.8452 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1149 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6519 | |
| 301 | R | A | -1.9189 | |
| 302 | P | A | -0.9816 | |
| 303 | F | A | -0.1892 | |
| 304 | W | A | -0.5196 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0818 | |
| 307 | R | A | -2.9284 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6531 | |
| 310 | G | A | -1.4147 | |
| 311 | N | A | -1.3950 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9139 | |
| 319 | N | A | -0.8918 | |
| 320 | E | A | -1.0505 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3506 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1521 | |
| 333 | N | A | 0.4238 | |
| 334 | F | A | 1.4778 | |
| 335 | T | A | 0.7535 | |
| 336 | I | A | 0.3861 | |
| 337 | S | A | -1.1175 | |
| 338 | Q | A | -1.9700 | |
| 339 | Q | A | -1.8252 | |
| 340 | L | A | 0.1036 | |
| 341 | S | A | -0.3559 | |
| 342 | T | A | -0.9963 | |
| 343 | P | A | -1.5244 | |
| 344 | E | A | -2.5995 | |
| 345 | N | A | -2.0471 | |
| 346 | N | A | -1.3414 | |
| 347 | V | A | 0.7687 | |
| 348 | Y | A | 1.1328 | |
| 349 | D | A | -0.3078 | |
| 350 | P | A | -0.8324 | |
| 351 | S | A | -0.7269 | |
| 352 | N | A | -0.8082 | |
| 353 | F | A | -1.2992 | |
| 354 | K | A | -2.1597 | |
| 355 | N | A | -1.8562 | |
| 356 | Y | A | -0.1455 | |
| 357 | L | A | 0.5743 | |
| 358 | R | A | 0.9218 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4740 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0030 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.8966 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6634 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3106 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3286 | |
| 376 | L | A | -1.7612 | |
| 377 | D | A | -2.0384 | |
| 378 | P | A | -1.0652 | |
| 379 | G | A | -1.0262 | |
| 380 | V | A | -0.9384 | |
| 381 | L | A | -0.5477 | |
| 382 | A | A | -0.6678 | |
| 383 | H | A | -0.8523 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4184 | |
| 386 | T | A | -0.5810 | |
| 387 | M | A | -0.3357 | |
| 388 | N | A | -0.8739 | |
| 389 | P | A | -1.2782 | |
| 390 | T | A | -1.5342 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5326 | |
| 393 | E | A | -2.9229 | |
| 394 | N | A | -2.6468 | |
| 395 | W | A | -1.5216 | |
| 396 | N | A | -1.3768 | |
| 397 | L | A | -0.2350 | |
| 398 | G | A | 0.5160 | |
| 399 | F | A | 2.4166 | |
| 400 | V | A | 1.8432 | |
| 401 | P | A | 0.0491 | |
| 402 | P | A | -1.9256 | |
| 403 | K | A | -3.5161 | |
| 404 | E | A | -3.8607 | |
| 405 | R | A | -4.1431 | |
| 406 | E | A | -3.8540 | |
| 407 | D | A | -2.8806 | |
| 408 | P | A | -1.7706 | |
| 409 | Y | A | -0.9864 | |
| 410 | K | A | -2.0954 | |
| 411 | G | A | -0.6384 | |
| 412 | L | A | 0.6582 | |
| 413 | I | A | 1.5765 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3924 | |
| 416 | E | A | -1.6564 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8390 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8917 | |
| 421 | E | A | -2.4933 | |
| 422 | R | A | -2.0470 | |
| 423 | F | A | -1.0123 | |
| 424 | S | A | -1.3152 | |
| 425 | Q | A | -1.8012 | |
| 426 | D | A | -2.8929 | |
| 427 | L | A | -2.0002 | |
| 428 | D | A | -2.8003 | |
| 429 | Q | A | -2.6236 | |
| 430 | F | A | -1.4590 | |
| 431 | A | A | -0.9106 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5990 | |
| 435 | K | A | -0.7361 | |
| 436 | F | A | 0.1426 | |
| 437 | L | A | 1.0240 | |
| 438 | Y | A | 0.8219 | |
| 439 | Q | A | -0.2712 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine