| Chain sequence(s) |
A: FGGHKGF
C: FGGHKGF B: FGGHKGF E: FGGHKGF D: FGGHKGF G: FGGHKGF F: FGGHKGF I: FGGHKGF H: FGGHKGF K: FGGHKGF J: FGGHKGF M: FGGHKGF L: FGGHKGF O: FGGHKGF N: FGGHKGF Q: FGGHKGF P: FGGHKGF S: FGGHKGF R: FGGHKGF T: FGGHKGF input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:17)
[INFO] Main: Simulation completed successfully. (00:07:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 2.6734 | |
| 2 | G | A | 0.4336 | |
| 3 | G | A | -1.6307 | |
| 4 | H | A | -3.1433 | |
| 5 | K | A | -3.2172 | |
| 6 | G | A | -1.1390 | |
| 7 | F | A | 1.4561 | |
| 1 | F | B | 3.0664 | |
| 2 | G | B | 0.5052 | |
| 3 | G | B | -0.9883 | |
| 4 | H | B | -2.5407 | |
| 5 | K | B | -2.5992 | |
| 6 | G | B | -0.6622 | |
| 7 | F | B | 1.8114 | |
| 1 | F | C | 3.2015 | |
| 2 | G | C | 1.0343 | |
| 3 | G | C | -0.7480 | |
| 4 | H | C | -2.2556 | |
| 5 | K | C | -2.6007 | |
| 6 | G | C | -0.4624 | |
| 7 | F | C | 1.7641 | |
| 1 | F | D | 3.0250 | |
| 2 | G | D | 0.8329 | |
| 3 | G | D | -0.8925 | |
| 4 | H | D | -2.3667 | |
| 5 | K | D | -2.2205 | |
| 6 | G | D | -0.3087 | |
| 7 | F | D | 2.0263 | |
| 1 | F | E | 3.0998 | |
| 2 | G | E | 0.8860 | |
| 3 | G | E | -0.8507 | |
| 4 | H | E | -2.3528 | |
| 5 | K | E | -2.5586 | |
| 6 | G | E | -0.5761 | |
| 7 | F | E | 1.7770 | |
| 1 | F | F | 2.6251 | |
| 2 | G | F | 0.4700 | |
| 3 | G | F | -1.1760 | |
| 4 | H | F | -3.0032 | |
| 5 | K | F | -2.7838 | |
| 6 | G | F | -0.8865 | |
| 7 | F | F | 1.6610 | |
| 1 | F | G | 2.1232 | |
| 2 | G | G | -0.0916 | |
| 3 | G | G | -1.6542 | |
| 4 | H | G | -3.0855 | |
| 5 | K | G | -2.8733 | |
| 6 | G | G | -0.9747 | |
| 7 | F | G | 1.6131 | |
| 1 | F | H | 2.9596 | |
| 2 | G | H | 0.3953 | |
| 3 | G | H | -1.3433 | |
| 4 | H | H | -3.0622 | |
| 5 | K | H | -2.9820 | |
| 6 | G | H | -1.2321 | |
| 7 | F | H | 1.4968 | |
| 1 | F | I | 2.8287 | |
| 2 | G | I | 0.4309 | |
| 3 | G | I | -1.1781 | |
| 4 | H | I | -2.8763 | |
| 5 | K | I | -2.5812 | |
| 6 | G | I | -0.7249 | |
| 7 | F | I | 1.7711 | |
| 1 | F | J | 2.9969 | |
| 2 | G | J | 0.4829 | |
| 3 | G | J | -1.0749 | |
| 4 | H | J | -3.1473 | |
| 5 | K | J | -2.7798 | |
| 6 | G | J | -0.5966 | |
| 7 | F | J | 1.6276 | |
| 1 | F | K | 3.3703 | |
| 2 | G | K | 0.8854 | |
| 3 | G | K | -0.9410 | |
| 4 | H | K | -2.6029 | |
| 5 | K | K | -2.5566 | |
| 6 | G | K | -0.6739 | |
| 7 | F | K | 1.8358 | |
| 1 | F | L | 3.3060 | |
| 2 | G | L | 0.8118 | |
| 3 | G | L | -0.9632 | |
| 4 | H | L | -2.7236 | |
| 5 | K | L | -2.7827 | |
| 6 | G | L | -0.6605 | |
| 7 | F | L | 1.5876 | |
| 1 | F | M | 2.7397 | |
| 2 | G | M | 0.4467 | |
| 3 | G | M | -1.1024 | |
| 4 | H | M | -2.7825 | |
| 5 | K | M | -2.4906 | |
| 6 | G | M | -0.6881 | |
| 7 | F | M | 1.7862 | |
| 1 | F | N | 2.9945 | |
| 2 | G | N | 0.1020 | |
| 3 | G | N | -1.2884 | |
| 4 | H | N | -3.0719 | |
| 5 | K | N | -2.6129 | |
| 6 | G | N | -0.7998 | |
| 7 | F | N | 1.5214 | |
| 1 | F | O | 2.8823 | |
| 2 | G | O | 0.2581 | |
| 3 | G | O | -1.3925 | |
| 4 | H | O | -2.5852 | |
| 5 | K | O | -2.8316 | |
| 6 | G | O | -0.7521 | |
| 7 | F | O | 1.7000 | |
| 1 | F | P | 2.7148 | |
| 2 | G | P | 0.5522 | |
| 3 | G | P | -1.0944 | |
| 4 | H | P | -2.9230 | |
| 5 | K | P | -3.0451 | |
| 6 | G | P | -1.0202 | |
| 7 | F | P | 1.6138 | |
| 1 | F | Q | 2.3058 | |
| 2 | G | Q | 0.4788 | |
| 3 | G | Q | -1.2416 | |
| 4 | H | Q | -2.8641 | |
| 5 | K | Q | -2.6599 | |
| 6 | G | Q | -0.8168 | |
| 7 | F | Q | 1.7176 | |
| 1 | F | R | 2.4487 | |
| 2 | G | R | 0.2620 | |
| 3 | G | R | -1.3321 | |
| 4 | H | R | -2.6176 | |
| 5 | K | R | -2.5518 | |
| 6 | G | R | -0.8558 | |
| 7 | F | R | 1.6965 | |
| 1 | F | S | 2.5071 | |
| 2 | G | S | 0.7370 | |
| 3 | G | S | -1.2641 | |
| 4 | H | S | -2.8537 | |
| 5 | K | S | -2.8416 | |
| 6 | G | S | -1.3437 | |
| 7 | F | S | 1.3995 | |
| 1 | F | T | 2.4645 | |
| 2 | G | T | -0.2494 | |
| 3 | G | T | -1.6563 | |
| 4 | H | T | -3.2843 | |
| 5 | K | T | -3.0690 | |
| 6 | G | T | -1.1751 | |
| 7 | F | T | 1.4552 |