| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIIKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTTGHPLWNKLGDTENPTAPLHEGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRSGPDGVPLPADPPPSPLYTPPPPDSPNAVLPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPLPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9381 | |
| 2 | L | A | 1.9597 | |
| 3 | P | A | 0.8318 | |
| 4 | P | A | 0.3780 | |
| 5 | T | A | 0.1240 | |
| 6 | T | A | 0.1335 | |
| 7 | P | A | 0.1748 | |
| 8 | V | A | 1.2168 | |
| 9 | A | A | 0.0940 | |
| 10 | K | A | -1.0032 | |
| 11 | V | A | -0.1225 | |
| 12 | Q | A | -1.3523 | |
| 13 | S | A | -1.5295 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4010 | |
| 16 | E | A | -2.4272 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4628 | |
| 20 | P | A | 0.1091 | |
| 21 | T | A | 0.1297 | |
| 22 | S | A | -0.1714 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1077 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2991 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9005 | |
| 31 | R | A | -2.6877 | |
| 32 | L | A | -0.8026 | |
| 33 | L | A | 1.1604 | |
| 34 | T | A | 1.3715 | |
| 35 | V | A | 1.8363 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.1655 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.5548 | |
| 40 | K | A | -1.4928 | |
| 41 | D | A | -0.6666 | |
| 42 | I | A | 1.0427 | |
| 43 | I | A | 1.2827 | |
| 44 | K | A | -1.0585 | |
| 45 | N | A | -1.8862 | |
| 46 | G | A | -1.1885 | |
| 47 | K | A | -0.9042 | |
| 48 | V | A | 1.5227 | |
| 49 | V | A | 2.1098 | |
| 50 | V | A | 1.3432 | |
| 51 | P | A | 0.5386 | |
| 52 | K | A | -0.5672 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1670 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3839 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2669 | |
| 70 | K | A | -1.7872 | |
| 71 | F | A | -0.6354 | |
| 72 | A | A | -0.5758 | |
| 73 | L | A | -0.8793 | |
| 74 | P | A | -1.2181 | |
| 75 | Q | A | -2.4993 | |
| 76 | K | A | -3.1054 | |
| 77 | D | A | -2.9867 | |
| 78 | F | A | -1.6679 | |
| 79 | Y | A | -1.8825 | |
| 80 | D | A | -2.6728 | |
| 81 | P | A | -2.2942 | |
| 82 | E | A | -3.0404 | |
| 83 | K | A | -3.3874 | |
| 84 | E | A | -2.4475 | |
| 85 | R | A | -1.2822 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6315 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9819 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3655 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6863 | |
| 99 | G | A | -0.5267 | |
| 100 | P | A | -0.3781 | |
| 101 | L | A | 0.0982 | |
| 102 | G | A | -0.1494 | |
| 103 | K | A | -0.5208 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4077 | |
| 106 | T | A | 0.0000 | |
| 107 | G | A | 0.1590 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4237 | |
| 110 | L | A | 0.3121 | |
| 111 | W | A | 0.0000 | |
| 112 | N | A | -1.1176 | |
| 113 | K | A | -0.4787 | |
| 114 | L | A | -1.2267 | |
| 115 | G | A | -0.8659 | |
| 116 | D | A | -1.1798 | |
| 117 | T | A | -0.8645 | |
| 118 | E | A | -1.7891 | |
| 119 | N | A | -1.9237 | |
| 120 | P | A | -1.3482 | |
| 121 | T | A | -0.6903 | |
| 122 | A | A | -0.4423 | |
| 123 | P | A | -0.7592 | |
| 124 | L | A | -0.7416 | |
| 125 | H | A | -1.8150 | |
| 126 | E | A | -2.7182 | |
| 127 | G | A | -2.1924 | |
| 128 | A | A | -1.5759 | |
| 129 | D | A | -2.4511 | |
| 130 | D | A | -2.0429 | |
| 131 | R | A | -1.0545 | |
| 132 | V | A | 0.2976 | |
| 133 | A | A | 0.4641 | |
| 134 | F | A | 0.3003 | |
| 135 | S | A | -0.0553 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.4296 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5527 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2072 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1586 | |
| 157 | D | A | 0.3364 | |
| 158 | L | A | 0.7837 | |
| 159 | A | A | 0.1542 | |
| 160 | E | A | -1.4652 | |
| 161 | P | A | -0.2244 | |
| 162 | C | A | 0.1881 | |
| 163 | P | A | -0.1643 | |
| 164 | G | A | -0.0699 | |
| 165 | L | A | 0.6039 | |
| 166 | P | A | -0.1090 | |
| 167 | P | A | -0.3366 | |
| 168 | G | A | -0.4220 | |
| 169 | A | A | 0.2949 | |
| 170 | C | A | 1.0113 | |
| 171 | P | A | 0.5173 | |
| 172 | P | A | 0.8311 | |
| 173 | I | A | 1.9740 | |
| 174 | Q | A | 0.8445 | |
| 175 | L | A | 1.4855 | |
| 176 | V | A | 0.8570 | |
| 177 | N | A | -0.3119 | |
| 178 | S | A | -0.0974 | |
| 179 | V | A | 0.4166 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3835 | |
| 182 | D | A | 0.0730 | |
| 183 | G | A | -0.1561 | |
| 184 | D | A | -0.5300 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1240 | |
| 190 | F | A | 0.0681 | |
| 191 | G | A | -0.1033 | |
| 192 | N | A | -0.2558 | |
| 193 | M | A | -0.1103 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3752 | |
| 197 | E | A | -2.5673 | |
| 198 | L | A | -1.2213 | |
| 199 | Q | A | -2.5596 | |
| 200 | Q | A | -3.3211 | |
| 201 | D | A | -3.5855 | |
| 202 | R | A | -3.3417 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2146 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3337 | |
| 211 | S | A | -1.8605 | |
| 212 | T | A | -1.4031 | |
| 213 | R | A | -2.0305 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1688 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3907 | |
| 220 | L | A | 0.5792 | |
| 221 | K | A | -1.1788 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8349 | |
| 224 | N | A | -1.6006 | |
| 225 | E | A | -1.2553 | |
| 226 | A | A | -0.5965 | |
| 227 | Y | A | -0.3672 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6906 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.1810 | |
| 234 | F | A | 0.4838 | |
| 235 | G | A | -0.7142 | |
| 236 | R | A | -2.4387 | |
| 237 | R | A | -2.6330 | |
| 238 | E | A | -1.6341 | |
| 239 | Q | A | 0.0481 | |
| 240 | V | A | 1.5082 | |
| 241 | Y | A | 1.1180 | |
| 242 | A | A | 0.2188 | |
| 243 | R | A | -0.9171 | |
| 244 | H | A | -0.8177 | |
| 245 | F | A | 0.0195 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.7271 | |
| 249 | S | A | -1.4199 | |
| 250 | G | A | -1.2396 | |
| 251 | P | A | -0.7588 | |
| 252 | D | A | -0.3542 | |
| 253 | G | A | 0.0680 | |
| 254 | V | A | 1.3362 | |
| 255 | P | A | 0.4697 | |
| 256 | L | A | 0.8410 | |
| 257 | P | A | 0.3071 | |
| 258 | A | A | -0.2117 | |
| 259 | D | A | -0.9160 | |
| 260 | P | A | -0.9446 | |
| 261 | P | A | -0.6487 | |
| 262 | P | A | -0.5026 | |
| 263 | S | A | -0.2015 | |
| 264 | P | A | 0.2563 | |
| 265 | L | A | 1.3922 | |
| 266 | Y | A | 0.7240 | |
| 267 | T | A | -0.0312 | |
| 268 | P | A | -0.3576 | |
| 269 | P | A | -0.6080 | |
| 270 | P | A | -1.2530 | |
| 271 | P | A | -1.2621 | |
| 272 | D | A | -2.0948 | |
| 273 | S | A | -1.4044 | |
| 274 | P | A | -1.1211 | |
| 275 | N | A | -1.1374 | |
| 276 | A | A | -0.3247 | |
| 277 | V | A | 1.2783 | |
| 278 | L | A | 0.9325 | |
| 279 | P | A | -0.1850 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | 0.0101 | |
| 282 | D | A | -0.4329 | |
| 283 | Y | A | 0.9055 | |
| 284 | F | A | 0.7174 | |
| 285 | G | A | 0.2379 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9283 | |
| 291 | L | A | 1.6215 | |
| 292 | V | A | 0.6530 | |
| 293 | S | A | -0.1437 | |
| 294 | S | A | -0.9484 | |
| 295 | D | A | -1.8414 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1282 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6497 | |
| 301 | R | A | -1.9077 | |
| 302 | P | A | -0.9734 | |
| 303 | F | A | -0.1727 | |
| 304 | W | A | -0.5606 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0774 | |
| 307 | R | A | -2.8313 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.3707 | |
| 310 | G | A | -1.2301 | |
| 311 | N | A | -1.2569 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8006 | |
| 319 | N | A | -0.9238 | |
| 320 | E | A | -1.0314 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3056 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0393 | |
| 333 | N | A | 0.5719 | |
| 334 | F | A | 1.7578 | |
| 335 | T | A | 0.8839 | |
| 336 | I | A | 0.4725 | |
| 337 | S | A | -0.9526 | |
| 338 | Q | A | -1.7751 | |
| 339 | Q | A | -1.2903 | |
| 340 | L | A | 0.5922 | |
| 341 | C | A | 0.3881 | |
| 342 | T | A | 0.2059 | |
| 343 | P | A | -0.0954 | |
| 344 | L | A | 0.5531 | |
| 345 | P | A | 0.2603 | |
| 346 | N | A | -0.1657 | |
| 347 | V | A | 1.6215 | |
| 348 | Y | A | 1.5359 | |
| 349 | D | A | 0.1946 | |
| 350 | P | A | -0.3686 | |
| 351 | S | A | -0.3289 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.7895 | |
| 354 | K | A | -1.8487 | |
| 355 | N | A | -1.7816 | |
| 356 | Y | A | -0.0806 | |
| 357 | L | A | 0.6602 | |
| 358 | R | A | 0.9775 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3866 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0764 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0532 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6861 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3018 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3108 | |
| 376 | L | A | -1.7068 | |
| 377 | D | A | -1.9951 | |
| 378 | P | A | -1.0395 | |
| 379 | G | A | -1.0134 | |
| 380 | V | A | -0.9322 | |
| 381 | L | A | -0.5295 | |
| 382 | A | A | -0.6523 | |
| 383 | H | A | -0.7977 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3995 | |
| 386 | T | A | -0.5399 | |
| 387 | M | A | -0.3465 | |
| 388 | N | A | -0.8550 | |
| 389 | P | A | -1.2320 | |
| 390 | T | A | -1.4213 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4220 | |
| 393 | E | A | -2.7562 | |
| 394 | N | A | -2.3416 | |
| 395 | W | A | -1.3590 | |
| 396 | N | A | -1.1318 | |
| 397 | L | A | -0.2222 | |
| 398 | G | A | 0.5286 | |
| 399 | F | A | 2.4086 | |
| 400 | V | A | 1.8170 | |
| 401 | P | A | 0.0503 | |
| 402 | P | A | -1.7733 | |
| 403 | K | A | -3.3051 | |
| 404 | E | A | -3.7528 | |
| 405 | R | A | -3.8634 | |
| 406 | E | A | -3.7690 | |
| 407 | D | A | -2.8735 | |
| 408 | P | A | -1.7644 | |
| 409 | Y | A | -0.9895 | |
| 410 | K | A | -2.1226 | |
| 411 | G | A | -0.6349 | |
| 412 | L | A | 0.6786 | |
| 413 | I | A | 1.5835 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4138 | |
| 416 | E | A | -1.7319 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9689 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0637 | |
| 421 | E | A | -2.7980 | |
| 422 | R | A | -2.6653 | |
| 423 | F | A | -1.2957 | |
| 424 | S | A | -1.4857 | |
| 425 | Q | A | -1.9101 | |
| 426 | D | A | -2.9133 | |
| 427 | L | A | -1.9913 | |
| 428 | D | A | -2.7810 | |
| 429 | Q | A | -2.6225 | |
| 430 | F | A | -1.4130 | |
| 431 | A | A | -0.8831 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5510 | |
| 435 | K | A | -0.6871 | |
| 436 | F | A | 0.1632 | |
| 437 | L | A | 1.0390 | |
| 438 | Y | A | 0.8385 | |
| 439 | Q | A | -0.2675 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine