| Chain sequence(s) |
A: YHPIETLVDIFQEYPDEIEYIFKPSAVPLMRGGSNDEGLEVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKERPKKD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:08)
[INFO] Main: Simulation completed successfully. (00:01:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | -0.0314 | |
| 2 | H | A | -0.8519 | |
| 3 | P | A | -0.7709 | |
| 4 | I | A | 0.1083 | |
| 5 | E | A | -1.1189 | |
| 6 | T | A | -0.0850 | |
| 7 | L | A | 1.0416 | |
| 8 | V | A | 0.1760 | |
| 9 | D | A | -0.3166 | |
| 10 | I | A | 0.0000 | |
| 11 | F | A | 0.6148 | |
| 12 | Q | A | -0.9848 | |
| 13 | E | A | -0.9975 | |
| 14 | Y | A | -0.3489 | |
| 15 | P | A | -0.7765 | |
| 16 | D | A | -1.5741 | |
| 17 | E | A | -0.4401 | |
| 18 | I | A | 1.0404 | |
| 19 | E | A | -0.5589 | |
| 20 | Y | A | 0.0911 | |
| 21 | I | A | 1.0444 | |
| 22 | F | A | 0.0000 | |
| 23 | K | A | -1.4706 | |
| 24 | P | A | -1.3688 | |
| 25 | S | A | -0.3605 | |
| 26 | A | A | -0.1216 | |
| 27 | V | A | 0.0000 | |
| 28 | P | A | 0.0851 | |
| 29 | L | A | 0.0000 | |
| 30 | M | A | -0.9948 | |
| 31 | R | A | -1.9913 | |
| 32 | G | A | 0.0000 | |
| 33 | G | A | -1.1511 | |
| 34 | S | A | -1.9830 | |
| 35 | N | A | -2.5214 | |
| 36 | D | A | -3.2858 | |
| 37 | E | A | -3.1918 | |
| 38 | G | A | -1.8853 | |
| 39 | L | A | -0.8947 | |
| 40 | E | A | -1.7037 | |
| 41 | V | A | 0.0000 | |
| 42 | P | A | -2.3870 | |
| 43 | T | A | -3.0782 | |
| 44 | E | A | -3.7350 | |
| 45 | E | A | -3.6009 | |
| 46 | S | A | -1.9753 | |
| 47 | N | A | -1.3270 | |
| 48 | I | A | -0.3538 | |
| 49 | T | A | -0.7252 | |
| 50 | M | A | -0.8404 | |
| 51 | Q | A | -1.6139 | |
| 52 | I | A | 0.0000 | |
| 53 | M | A | -0.4581 | |
| 54 | R | A | -0.7718 | |
| 55 | I | A | -0.6868 | |
| 56 | K | A | -1.3277 | |
| 57 | P | A | -1.3797 | |
| 58 | H | A | -1.9482 | |
| 59 | Q | A | -2.2454 | |
| 60 | G | A | -1.9833 | |
| 61 | Q | A | -1.5801 | |
| 62 | H | A | -0.5074 | |
| 63 | I | A | 0.5619 | |
| 64 | G | A | -0.6586 | |
| 65 | E | A | -1.8304 | |
| 66 | M | A | 0.0000 | |
| 67 | S | A | -0.8056 | |
| 68 | F | A | 0.0000 | |
| 69 | L | A | -0.9262 | |
| 70 | Q | A | -1.7080 | |
| 71 | H | A | -2.8297 | |
| 72 | N | A | -2.9713 | |
| 73 | K | A | -3.2166 | |
| 74 | E | A | -3.6500 | |
| 75 | R | A | -3.1701 | |
| 76 | P | A | -2.9805 | |
| 77 | K | A | -3.7379 | |
| 78 | K | A | -3.6207 | |
| 79 | D | A | -3.0374 |