Project name: query_structure

Status: done

Started: 2026-03-16 22:51:05
Settings
Chain sequence(s) A: YHPIETLVDIFQEYPDEIEYIFKPSAVPLMRGGSNDEGLEVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKERPKKD
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:08)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:09)
Show buried residues

Minimal score value
-3.7379
Maximal score value
1.0444
Average score
-1.1985
Total score value
-94.6845

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Y A -0.0314
2 H A -0.8519
3 P A -0.7709
4 I A 0.1083
5 E A -1.1189
6 T A -0.0850
7 L A 1.0416
8 V A 0.1760
9 D A -0.3166
10 I A 0.0000
11 F A 0.6148
12 Q A -0.9848
13 E A -0.9975
14 Y A -0.3489
15 P A -0.7765
16 D A -1.5741
17 E A -0.4401
18 I A 1.0404
19 E A -0.5589
20 Y A 0.0911
21 I A 1.0444
22 F A 0.0000
23 K A -1.4706
24 P A -1.3688
25 S A -0.3605
26 A A -0.1216
27 V A 0.0000
28 P A 0.0851
29 L A 0.0000
30 M A -0.9948
31 R A -1.9913
32 G A 0.0000
33 G A -1.1511
34 S A -1.9830
35 N A -2.5214
36 D A -3.2858
37 E A -3.1918
38 G A -1.8853
39 L A -0.8947
40 E A -1.7037
41 V A 0.0000
42 P A -2.3870
43 T A -3.0782
44 E A -3.7350
45 E A -3.6009
46 S A -1.9753
47 N A -1.3270
48 I A -0.3538
49 T A -0.7252
50 M A -0.8404
51 Q A -1.6139
52 I A 0.0000
53 M A -0.4581
54 R A -0.7718
55 I A -0.6868
56 K A -1.3277
57 P A -1.3797
58 H A -1.9482
59 Q A -2.2454
60 G A -1.9833
61 Q A -1.5801
62 H A -0.5074
63 I A 0.5619
64 G A -0.6586
65 E A -1.8304
66 M A 0.0000
67 S A -0.8056
68 F A 0.0000
69 L A -0.9262
70 Q A -1.7080
71 H A -2.8297
72 N A -2.9713
73 K A -3.2166
74 E A -3.6500
75 R A -3.1701
76 P A -2.9805
77 K A -3.7379
78 K A -3.6207
79 D A -3.0374
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Laboratory of Theory of Biopolymers 2018