| Chain sequence(s) |
A: TYAPLNFIAIGIGATLGAWLRWVLGLKLNGAGWPWGTLTANLVGGYLIGVMVALIASHPEWPAWIRLAAVTGFLGGLTTFSTFSAETVDMLCRGVYATAAAYAGASLAGSLAMTGLGLATVRLLLR
C: SSVPTKLEVVAATPTSLLISWDAPAVTVDHYVITYGETGAYWSYQEFTVPGSKSTATISGLKPGVDYTITVYANPYSDAPIYYSYHSPISINYRT B: MLTYAPLNFIAIGIGATLGAWLRWVLGLKLNGAGWPWGTLTANLVGGYLIGVMVALIASHPEWPAWIRRLAAVTGFLGGLTTFSTFSAETVDMLCRGVYATAAAYAGASLAGSLAMTGLGLATVRLLLR input PDB |
| Selected Chain(s) | A,C,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:19)
[INFO] Main: Simulation completed successfully. (00:02:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 3 | T | A | 0.7051 | |
| 4 | Y | A | 1.6039 | |
| 5 | A | A | 1.4688 | |
| 6 | P | A | 1.4843 | |
| 7 | L | A | 2.6640 | |
| 8 | N | A | 0.0000 | |
| 9 | F | A | 2.8028 | |
| 10 | I | A | 3.4739 | |
| 11 | A | A | 0.0000 | |
| 12 | I | A | 0.0000 | |
| 13 | G | A | 2.6296 | |
| 14 | I | A | 3.2051 | |
| 15 | G | A | 0.0000 | |
| 16 | A | A | 0.0000 | |
| 17 | T | A | 2.3652 | |
| 18 | L | A | 2.1553 | |
| 19 | G | A | 0.0000 | |
| 20 | A | A | 0.0000 | |
| 21 | W | A | 1.4659 | |
| 22 | L | A | 1.3479 | |
| 23 | R | A | 0.0000 | |
| 24 | W | A | 0.0000 | |
| 25 | V | A | 0.4813 | |
| 26 | L | A | 0.2674 | |
| 27 | G | A | -0.1431 | |
| 28 | L | A | -0.4478 | |
| 29 | K | A | -1.3850 | |
| 30 | L | A | -0.3068 | |
| 31 | N | A | -0.4940 | |
| 32 | G | A | -0.5016 | |
| 33 | A | A | -0.0799 | |
| 34 | G | A | -0.1878 | |
| 35 | W | A | 0.3455 | |
| 36 | P | A | 0.0000 | |
| 37 | W | A | 0.5890 | |
| 38 | G | A | 0.0000 | |
| 39 | T | A | 0.0000 | |
| 40 | L | A | 0.0000 | |
| 41 | T | A | 0.5653 | |
| 42 | A | A | 0.0000 | |
| 43 | N | A | 0.0000 | |
| 44 | L | A | 0.8927 | |
| 45 | V | A | 1.1498 | |
| 46 | G | A | 0.0000 | |
| 47 | G | A | 0.0000 | |
| 48 | Y | A | 1.4907 | |
| 49 | L | A | 1.3536 | |
| 50 | I | A | 0.0000 | |
| 51 | G | A | 0.0000 | |
| 52 | V | A | 1.1631 | |
| 53 | M | A | 0.8094 | |
| 54 | V | A | 0.8108 | |
| 55 | A | A | 0.0000 | |
| 56 | L | A | 0.5734 | |
| 57 | I | A | 0.1580 | |
| 58 | A | A | 0.0697 | |
| 59 | S | A | -0.1853 | |
| 60 | H | A | -0.6972 | |
| 61 | P | A | -1.0319 | |
| 62 | E | A | -1.7731 | |
| 63 | W | A | -0.4843 | |
| 64 | P | A | -0.1871 | |
| 65 | A | A | 0.2048 | |
| 66 | W | A | 1.3374 | |
| 67 | I | A | 0.4420 | |
| 68 | R | A | -0.4600 | |
| 69 | L | A | 0.3537 | |
| 70 | A | A | 0.9866 | |
| 71 | A | A | 0.5175 | |
| 72 | V | A | 0.0000 | |
| 73 | T | A | 0.0492 | |
| 74 | G | A | 0.0000 | |
| 75 | F | A | 1.1504 | |
| 76 | L | A | 0.0000 | |
| 77 | G | A | 0.0000 | |
| 78 | G | A | 0.0000 | |
| 79 | L | A | 0.0000 | |
| 80 | T | A | 0.0000 | |
| 81 | T | A | 0.0000 | |
| 82 | F | A | 0.0000 | |
| 83 | S | A | 0.0000 | |
| 84 | T | A | -0.0112 | |
| 85 | F | A | 0.0000 | |
| 86 | S | A | 0.0000 | |
| 87 | A | A | 0.0000 | |
| 88 | E | A | 0.0000 | |
| 89 | T | A | 0.0000 | |
| 90 | V | A | 0.0000 | |
| 91 | D | A | 0.2909 | |
| 92 | M | A | 0.0000 | |
| 93 | L | A | 1.0477 | |
| 94 | C | A | 0.8992 | |
| 95 | R | A | 0.3128 | |
| 96 | G | A | 0.0000 | |
| 97 | V | A | 0.0000 | |
| 98 | Y | A | 1.1200 | |
| 99 | A | A | 0.6454 | |
| 100 | T | A | 0.2024 | |
| 101 | A | A | 0.0000 | |
| 102 | A | A | 0.3288 | |
| 103 | A | A | 0.1138 | |
| 104 | Y | A | 0.0000 | |
| 105 | A | A | 0.0109 | |
| 106 | G | A | -0.1438 | |
| 107 | A | A | 0.0282 | |
| 108 | S | A | 0.0000 | |
| 109 | L | A | 0.2991 | |
| 110 | A | A | 0.2256 | |
| 111 | G | A | 0.2936 | |
| 112 | S | A | 0.0000 | |
| 113 | L | A | 0.7266 | |
| 114 | A | A | 0.8300 | |
| 115 | M | A | 1.3477 | |
| 116 | T | A | 0.0000 | |
| 117 | G | A | 0.9999 | |
| 118 | L | A | 1.8370 | |
| 119 | G | A | 0.0000 | |
| 120 | L | A | 1.4783 | |
| 121 | A | A | 1.2356 | |
| 122 | T | A | 1.3388 | |
| 123 | V | A | 0.0000 | |
| 124 | R | A | 0.8060 | |
| 125 | L | A | 1.7359 | |
| 126 | L | A | 2.1149 | |
| 127 | L | A | 1.3293 | |
| 128 | R | A | -0.3835 | |
| 1 | M | B | 2.1440 | |
| 2 | L | B | 2.3474 | |
| 3 | T | B | 1.5409 | |
| 4 | Y | B | 2.0499 | |
| 5 | A | B | 0.0000 | |
| 6 | P | B | 1.4401 | |
| 7 | L | B | 2.2836 | |
| 8 | N | B | 0.0000 | |
| 9 | F | B | 2.5135 | |
| 10 | I | B | 3.1441 | |
| 11 | A | B | 0.0000 | |
| 12 | I | B | 0.0000 | |
| 13 | G | B | 0.0000 | |
| 14 | I | B | 3.0629 | |
| 15 | G | B | 0.0000 | |
| 16 | A | B | 0.0000 | |
| 17 | T | B | 2.3846 | |
| 18 | L | B | 2.2986 | |
| 19 | G | B | 0.0000 | |
| 20 | A | B | 0.0000 | |
| 21 | W | B | 1.5226 | |
| 22 | L | B | 1.3297 | |
| 23 | R | B | 0.0000 | |
| 24 | W | B | 0.0000 | |
| 25 | V | B | 0.9328 | |
| 26 | L | B | 0.7100 | |
| 27 | G | B | 0.6396 | |
| 28 | L | B | 0.9623 | |
| 29 | K | B | -0.5071 | |
| 30 | L | B | 0.5176 | |
| 31 | N | B | 0.2137 | |
| 32 | G | B | -0.1431 | |
| 33 | A | B | -0.2456 | |
| 34 | G | B | -0.3268 | |
| 35 | W | B | 0.2018 | |
| 36 | P | B | 0.0000 | |
| 37 | W | B | 1.1521 | |
| 38 | G | B | 0.0000 | |
| 39 | T | B | 0.0000 | |
| 40 | L | B | 0.0000 | |
| 41 | T | B | 0.6855 | |
| 42 | A | B | 0.0000 | |
| 43 | N | B | 0.0000 | |
| 44 | L | B | 0.8925 | |
| 45 | V | B | 1.0841 | |
| 46 | G | B | 0.0000 | |
| 47 | G | B | 0.0000 | |
| 48 | Y | B | 1.3468 | |
| 49 | L | B | 1.1417 | |
| 50 | I | B | 0.0000 | |
| 51 | G | B | 0.0000 | |
| 52 | V | B | 0.7524 | |
| 53 | M | B | 0.5862 | |
| 54 | V | B | 0.0000 | |
| 55 | A | B | 0.0000 | |
| 56 | L | B | 0.3425 | |
| 57 | I | B | 0.0000 | |
| 58 | A | B | 0.1228 | |
| 59 | S | B | -0.1783 | |
| 60 | H | B | -0.6929 | |
| 61 | P | B | -0.9194 | |
| 62 | E | B | -1.8541 | |
| 63 | W | B | -0.4968 | |
| 64 | P | B | -0.0184 | |
| 65 | A | B | 0.5843 | |
| 66 | W | B | 1.4874 | |
| 67 | I | B | 0.7494 | |
| 68 | R | B | 0.0000 | |
| 69 | L | B | 0.0000 | |
| 70 | A | B | 1.2236 | |
| 71 | A | B | 0.6854 | |
| 72 | V | B | 0.0000 | |
| 73 | T | B | 0.2747 | |
| 74 | G | B | 0.0000 | |
| 75 | F | B | 1.2749 | |
| 76 | L | B | 0.0000 | |
| 77 | G | B | 0.0000 | |
| 78 | G | B | 0.0000 | |
| 79 | L | B | 0.0000 | |
| 80 | T | B | 0.0000 | |
| 81 | T | B | 0.0000 | |
| 82 | F | B | 0.0000 | |
| 83 | S | B | 0.0000 | |
| 84 | T | B | -0.0136 | |
| 85 | F | B | 0.0000 | |
| 86 | S | B | 0.0000 | |
| 87 | A | B | -0.2389 | |
| 88 | E | B | -0.7314 | |
| 89 | T | B | 0.0000 | |
| 90 | V | B | -0.4201 | |
| 91 | D | B | -1.5083 | |
| 92 | M | B | 0.0000 | |
| 93 | L | B | 0.4299 | |
| 94 | C | B | -0.1314 | |
| 95 | R | B | -1.3020 | |
| 96 | G | B | 0.0191 | |
| 97 | V | B | 1.5075 | |
| 98 | Y | B | 1.8137 | |
| 99 | A | B | 1.2330 | |
| 100 | T | B | 0.8741 | |
| 101 | A | B | 0.0000 | |
| 102 | A | B | 0.6076 | |
| 103 | A | B | 0.2263 | |
| 104 | Y | B | 0.0000 | |
| 105 | A | B | -0.0359 | |
| 106 | G | B | -0.1715 | |
| 107 | A | B | -0.0004 | |
| 108 | S | B | 0.0000 | |
| 109 | L | B | 0.2490 | |
| 110 | A | B | 0.1840 | |
| 111 | G | B | 0.2852 | |
| 112 | S | B | 0.0000 | |
| 113 | L | B | 0.6517 | |
| 114 | A | B | 0.6783 | |
| 115 | M | B | 1.2017 | |
| 116 | T | B | 0.0000 | |
| 117 | G | B | 0.8528 | |
| 118 | L | B | 1.5730 | |
| 119 | G | B | 0.0000 | |
| 120 | L | B | 0.7431 | |
| 121 | A | B | 0.8853 | |
| 122 | T | B | 1.2307 | |
| 123 | V | B | 0.0000 | |
| 124 | R | B | 0.1944 | |
| 125 | L | B | 1.7268 | |
| 126 | L | B | 1.9511 | |
| 127 | L | B | 1.1327 | |
| 128 | R | B | -0.6535 | |
| 3 | S | C | -0.2448 | |
| 4 | S | C | -0.2365 | |
| 5 | V | C | -0.2931 | |
| 6 | P | C | 0.0000 | |
| 7 | T | C | -1.6529 | |
| 8 | K | C | -2.6398 | |
| 9 | L | C | 0.0000 | |
| 10 | E | C | -1.9534 | |
| 11 | V | C | 0.0000 | |
| 12 | V | C | 1.4428 | |
| 13 | A | C | 0.8447 | |
| 14 | A | C | 0.3270 | |
| 15 | T | C | -0.1743 | |
| 16 | P | C | -1.0425 | |
| 17 | T | C | -0.9759 | |
| 18 | S | C | -0.5261 | |
| 19 | L | C | 0.0000 | |
| 20 | L | C | 0.6831 | |
| 21 | I | C | 0.0000 | |
| 22 | S | C | -0.9230 | |
| 23 | W | C | 0.0000 | |
| 24 | D | C | -2.6455 | |
| 25 | A | C | -1.0723 | |
| 26 | P | C | 0.0649 | |
| 27 | A | C | 0.6220 | |
| 28 | V | C | 1.6212 | |
| 29 | T | C | 0.3161 | |
| 30 | V | C | 0.0000 | |
| 31 | D | C | -1.0211 | |
| 32 | H | C | -0.9361 | |
| 33 | Y | C | 0.0000 | |
| 34 | V | C | 0.0000 | |
| 35 | I | C | 0.0000 | |
| 36 | T | C | 0.0000 | |
| 37 | Y | C | -0.6066 | |
| 38 | G | C | 0.0000 | |
| 39 | E | C | -1.7671 | |
| 40 | T | C | -1.2000 | |
| 41 | G | C | -0.5556 | |
| 42 | A | C | 0.0610 | |
| 43 | Y | C | 0.7423 | |
| 44 | W | C | 1.1857 | |
| 45 | S | C | 0.1350 | |
| 46 | Y | C | 0.0000 | |
| 47 | Q | C | -1.0756 | |
| 48 | E | C | -0.6565 | |
| 49 | F | C | 0.0839 | |
| 50 | T | C | 0.0157 | |
| 51 | V | C | 0.0000 | |
| 52 | P | C | -1.0300 | |
| 53 | G | C | 0.0000 | |
| 54 | S | C | -0.9632 | |
| 55 | K | C | -1.7610 | |
| 56 | S | C | -1.2516 | |
| 57 | T | C | -0.6429 | |
| 58 | A | C | 0.0000 | |
| 59 | T | C | 0.2472 | |
| 60 | I | C | 0.0000 | |
| 61 | S | C | -0.6555 | |
| 62 | G | C | -1.0200 | |
| 63 | L | C | 0.0000 | |
| 64 | K | C | -2.4570 | |
| 65 | P | C | -1.6978 | |
| 66 | G | C | -1.3594 | |
| 67 | V | C | -1.5700 | |
| 68 | D | C | -2.1698 | |
| 69 | Y | C | 0.0000 | |
| 70 | T | C | -1.0619 | |
| 71 | I | C | 0.0000 | |
| 72 | T | C | -0.1135 | |
| 73 | V | C | 0.0000 | |
| 74 | Y | C | 0.2017 | |
| 75 | A | C | 0.0000 | |
| 76 | N | C | 0.0000 | |
| 77 | P | C | -0.1047 | |
| 78 | Y | C | -0.3425 | |
| 79 | S | C | -0.5455 | |
| 80 | D | C | -0.8275 | |
| 81 | A | C | 0.0000 | |
| 82 | P | C | -0.2007 | |
| 83 | I | C | 0.2294 | |
| 84 | Y | C | 0.3578 | |
| 85 | Y | C | 0.0000 | |
| 86 | S | C | 0.3338 | |
| 87 | Y | C | 0.5937 | |
| 88 | H | C | 0.1399 | |
| 89 | S | C | -0.0902 | |
| 90 | P | C | 0.0190 | |
| 91 | I | C | -0.2525 | |
| 92 | S | C | -0.5932 | |
| 93 | I | C | -0.8161 | |
| 94 | N | C | -1.8381 | |
| 95 | Y | C | -1.4732 | |
| 96 | R | C | -2.5674 | |
| 97 | T | C | -1.5878 |