Project name: query_structure

Status: done

Started: 2026-03-17 01:05:42
Settings
Chain sequence(s) A: TYAPLNFIAIGIGATLGAWLRWVLGLKLNGAGWPWGTLTANLVGGYLIGVMVALIASHPEWPAWIRLAAVTGFLGGLTTFSTFSAETVDMLCRGVYATAAAYAGASLAGSLAMTGLGLATVRLLLR
C: SSVPTKLEVVAATPTSLLISWDAPAVTVDHYVITYGETGAYWSYQEFTVPGSKSTATISGLKPGVDYTITVYANPYSDAPIYYSYHSPISINYRT
B: MLTYAPLNFIAIGIGATLGAWLRWVLGLKLNGAGWPWGTLTANLVGGYLIGVMVALIASHPEWPAWIRRLAAVTGFLGGLTTFSTFSAETVDMLCRGVYATAAAYAGASLAGSLAMTGLGLATVRLLLR
input PDB
Selected Chain(s) A,C,B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:19)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:22)
Show buried residues

Minimal score value
-2.6455
Maximal score value
3.4739
Average score
0.204
Total score value
71.1918

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
3 T A 0.7051
4 Y A 1.6039
5 A A 1.4688
6 P A 1.4843
7 L A 2.6640
8 N A 0.0000
9 F A 2.8028
10 I A 3.4739
11 A A 0.0000
12 I A 0.0000
13 G A 2.6296
14 I A 3.2051
15 G A 0.0000
16 A A 0.0000
17 T A 2.3652
18 L A 2.1553
19 G A 0.0000
20 A A 0.0000
21 W A 1.4659
22 L A 1.3479
23 R A 0.0000
24 W A 0.0000
25 V A 0.4813
26 L A 0.2674
27 G A -0.1431
28 L A -0.4478
29 K A -1.3850
30 L A -0.3068
31 N A -0.4940
32 G A -0.5016
33 A A -0.0799
34 G A -0.1878
35 W A 0.3455
36 P A 0.0000
37 W A 0.5890
38 G A 0.0000
39 T A 0.0000
40 L A 0.0000
41 T A 0.5653
42 A A 0.0000
43 N A 0.0000
44 L A 0.8927
45 V A 1.1498
46 G A 0.0000
47 G A 0.0000
48 Y A 1.4907
49 L A 1.3536
50 I A 0.0000
51 G A 0.0000
52 V A 1.1631
53 M A 0.8094
54 V A 0.8108
55 A A 0.0000
56 L A 0.5734
57 I A 0.1580
58 A A 0.0697
59 S A -0.1853
60 H A -0.6972
61 P A -1.0319
62 E A -1.7731
63 W A -0.4843
64 P A -0.1871
65 A A 0.2048
66 W A 1.3374
67 I A 0.4420
68 R A -0.4600
69 L A 0.3537
70 A A 0.9866
71 A A 0.5175
72 V A 0.0000
73 T A 0.0492
74 G A 0.0000
75 F A 1.1504
76 L A 0.0000
77 G A 0.0000
78 G A 0.0000
79 L A 0.0000
80 T A 0.0000
81 T A 0.0000
82 F A 0.0000
83 S A 0.0000
84 T A -0.0112
85 F A 0.0000
86 S A 0.0000
87 A A 0.0000
88 E A 0.0000
89 T A 0.0000
90 V A 0.0000
91 D A 0.2909
92 M A 0.0000
93 L A 1.0477
94 C A 0.8992
95 R A 0.3128
96 G A 0.0000
97 V A 0.0000
98 Y A 1.1200
99 A A 0.6454
100 T A 0.2024
101 A A 0.0000
102 A A 0.3288
103 A A 0.1138
104 Y A 0.0000
105 A A 0.0109
106 G A -0.1438
107 A A 0.0282
108 S A 0.0000
109 L A 0.2991
110 A A 0.2256
111 G A 0.2936
112 S A 0.0000
113 L A 0.7266
114 A A 0.8300
115 M A 1.3477
116 T A 0.0000
117 G A 0.9999
118 L A 1.8370
119 G A 0.0000
120 L A 1.4783
121 A A 1.2356
122 T A 1.3388
123 V A 0.0000
124 R A 0.8060
125 L A 1.7359
126 L A 2.1149
127 L A 1.3293
128 R A -0.3835
1 M B 2.1440
2 L B 2.3474
3 T B 1.5409
4 Y B 2.0499
5 A B 0.0000
6 P B 1.4401
7 L B 2.2836
8 N B 0.0000
9 F B 2.5135
10 I B 3.1441
11 A B 0.0000
12 I B 0.0000
13 G B 0.0000
14 I B 3.0629
15 G B 0.0000
16 A B 0.0000
17 T B 2.3846
18 L B 2.2986
19 G B 0.0000
20 A B 0.0000
21 W B 1.5226
22 L B 1.3297
23 R B 0.0000
24 W B 0.0000
25 V B 0.9328
26 L B 0.7100
27 G B 0.6396
28 L B 0.9623
29 K B -0.5071
30 L B 0.5176
31 N B 0.2137
32 G B -0.1431
33 A B -0.2456
34 G B -0.3268
35 W B 0.2018
36 P B 0.0000
37 W B 1.1521
38 G B 0.0000
39 T B 0.0000
40 L B 0.0000
41 T B 0.6855
42 A B 0.0000
43 N B 0.0000
44 L B 0.8925
45 V B 1.0841
46 G B 0.0000
47 G B 0.0000
48 Y B 1.3468
49 L B 1.1417
50 I B 0.0000
51 G B 0.0000
52 V B 0.7524
53 M B 0.5862
54 V B 0.0000
55 A B 0.0000
56 L B 0.3425
57 I B 0.0000
58 A B 0.1228
59 S B -0.1783
60 H B -0.6929
61 P B -0.9194
62 E B -1.8541
63 W B -0.4968
64 P B -0.0184
65 A B 0.5843
66 W B 1.4874
67 I B 0.7494
68 R B 0.0000
69 L B 0.0000
70 A B 1.2236
71 A B 0.6854
72 V B 0.0000
73 T B 0.2747
74 G B 0.0000
75 F B 1.2749
76 L B 0.0000
77 G B 0.0000
78 G B 0.0000
79 L B 0.0000
80 T B 0.0000
81 T B 0.0000
82 F B 0.0000
83 S B 0.0000
84 T B -0.0136
85 F B 0.0000
86 S B 0.0000
87 A B -0.2389
88 E B -0.7314
89 T B 0.0000
90 V B -0.4201
91 D B -1.5083
92 M B 0.0000
93 L B 0.4299
94 C B -0.1314
95 R B -1.3020
96 G B 0.0191
97 V B 1.5075
98 Y B 1.8137
99 A B 1.2330
100 T B 0.8741
101 A B 0.0000
102 A B 0.6076
103 A B 0.2263
104 Y B 0.0000
105 A B -0.0359
106 G B -0.1715
107 A B -0.0004
108 S B 0.0000
109 L B 0.2490
110 A B 0.1840
111 G B 0.2852
112 S B 0.0000
113 L B 0.6517
114 A B 0.6783
115 M B 1.2017
116 T B 0.0000
117 G B 0.8528
118 L B 1.5730
119 G B 0.0000
120 L B 0.7431
121 A B 0.8853
122 T B 1.2307
123 V B 0.0000
124 R B 0.1944
125 L B 1.7268
126 L B 1.9511
127 L B 1.1327
128 R B -0.6535
3 S C -0.2448
4 S C -0.2365
5 V C -0.2931
6 P C 0.0000
7 T C -1.6529
8 K C -2.6398
9 L C 0.0000
10 E C -1.9534
11 V C 0.0000
12 V C 1.4428
13 A C 0.8447
14 A C 0.3270
15 T C -0.1743
16 P C -1.0425
17 T C -0.9759
18 S C -0.5261
19 L C 0.0000
20 L C 0.6831
21 I C 0.0000
22 S C -0.9230
23 W C 0.0000
24 D C -2.6455
25 A C -1.0723
26 P C 0.0649
27 A C 0.6220
28 V C 1.6212
29 T C 0.3161
30 V C 0.0000
31 D C -1.0211
32 H C -0.9361
33 Y C 0.0000
34 V C 0.0000
35 I C 0.0000
36 T C 0.0000
37 Y C -0.6066
38 G C 0.0000
39 E C -1.7671
40 T C -1.2000
41 G C -0.5556
42 A C 0.0610
43 Y C 0.7423
44 W C 1.1857
45 S C 0.1350
46 Y C 0.0000
47 Q C -1.0756
48 E C -0.6565
49 F C 0.0839
50 T C 0.0157
51 V C 0.0000
52 P C -1.0300
53 G C 0.0000
54 S C -0.9632
55 K C -1.7610
56 S C -1.2516
57 T C -0.6429
58 A C 0.0000
59 T C 0.2472
60 I C 0.0000
61 S C -0.6555
62 G C -1.0200
63 L C 0.0000
64 K C -2.4570
65 P C -1.6978
66 G C -1.3594
67 V C -1.5700
68 D C -2.1698
69 Y C 0.0000
70 T C -1.0619
71 I C 0.0000
72 T C -0.1135
73 V C 0.0000
74 Y C 0.2017
75 A C 0.0000
76 N C 0.0000
77 P C -0.1047
78 Y C -0.3425
79 S C -0.5455
80 D C -0.8275
81 A C 0.0000
82 P C -0.2007
83 I C 0.2294
84 Y C 0.3578
85 Y C 0.0000
86 S C 0.3338
87 Y C 0.5937
88 H C 0.1399
89 S C -0.0902
90 P C 0.0190
91 I C -0.2525
92 S C -0.5932
93 I C -0.8161
94 N C -1.8381
95 Y C -1.4732
96 R C -2.5674
97 T C -1.5878
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Laboratory of Theory of Biopolymers 2018