Project name: e4f69a01af36577

Status: done

Started: 2026-06-27 14:56:19
Settings
Chain sequence(s) A: KLDLKLDLKLDL
C: KLDLKLDLKLDL
B: KLDLKLDLKLDL
E: KLDLKLDLKLDL
D: KLDLKLDLKLDL
G: KLDLKLDLKLDL
F: KLDLKLDLKLDL
I: KLDLKLDLKLDL
H: KLDLKLDLKLDL
K: KLDLKLDLKLDL
J: KLDLKLDLKLDL
M: KLDLKLDLKLDL
L: KLDLKLDLKLDL
O: KLDLKLDLKLDL
N: KLDLKLDLKLDL
Q: KLDLKLDLKLDL
P: KLDLKLDLKLDL
S: KLDLKLDLKLDL
R: KLDLKLDLKLDL
T: KLDLKLDLKLDL
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:21:27)
[INFO]       Main:     Simulation completed successfully.                                          (00:21:32)
Show buried residues

Minimal score value
-2.5993
Maximal score value
1.9111
Average score
-0.6416
Total score value
-153.9836

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -1.4283
2 L A 0.3336
3 D A -1.0007
4 L A 0.7767
5 K A -1.1023
6 L A 0.4711
7 D A -1.3969
8 L A 0.4630
9 K A -0.8383
10 L A 0.7967
11 D A -0.4392
12 L A 1.0904
1 K B -1.5614
2 L B -0.2549
3 D B -1.5052
4 L B -0.3262
5 K B -1.9742
6 L B -0.4520
7 D B -1.3882
8 L B -0.1360
9 K B -1.2808
10 L B -0.3417
11 D B -1.1799
12 L B 0.6862
1 K C -1.2616
2 L C -0.1064
3 D C 0.0000
4 L C -0.3060
5 K C -2.1446
6 L C -0.7937
7 D C -2.0478
8 L C -0.5519
9 K C -1.7886
10 L C -0.6326
11 D C -1.3622
12 L C 0.5696
1 K D -2.2095
2 L D -0.7730
3 D D -1.5909
4 L D -0.4901
5 K D -2.0084
6 L D -0.7359
7 D D -1.5462
8 L D -0.3766
9 K D -1.2008
10 L D -0.1393
11 D D -0.5219
12 L D 1.3618
1 K E -2.2679
2 L E -0.9657
3 D E -1.4866
4 L E -0.3477
5 K E -1.8078
6 L E -0.4991
7 D E -1.4124
8 L E -0.1723
9 K E -1.0531
10 L E 0.0537
11 D E -0.5108
12 L E 1.3765
1 K F -0.7366
2 L F -0.0648
3 D F 0.0000
4 L F -0.1608
5 K F -1.4659
6 L F -0.4301
7 D F -1.1506
8 L F -0.2938
9 K F -1.1462
10 L F -0.5101
11 D F -1.3703
12 L F 0.6140
1 K G -1.1673
2 L G -0.1327
3 D G -0.9746
4 L G -0.1045
5 K G -1.4769
6 L G -0.5956
7 D G -1.4600
8 L G -0.3448
9 K G -1.1286
10 L G -0.1115
11 D G -0.6551
12 L G 1.0665
1 K H -0.8245
2 L H -0.1509
3 D H -1.1607
4 L H -0.6014
5 K H -2.1489
6 L H -1.0405
7 D H -1.6570
8 L H -0.3304
9 K H -1.0326
10 L H -0.2024
11 D H -1.2498
12 L H 0.9586
1 K I -0.9218
2 L I 0.0264
3 D I 0.0000
4 L I -0.2588
5 K I -1.7458
6 L I -0.9553
7 D I -1.6005
8 L I -0.4394
9 K I -1.0649
10 L I -0.0794
11 D I -0.7269
12 L I 1.1513
1 K J -0.7474
2 L J -0.1764
3 D J -0.8919
4 L J -0.2114
5 K J -1.4500
6 L J -0.4770
7 D J -1.3764
8 L J -0.1897
9 K J -1.0444
10 L J -0.1729
11 D J -1.1838
12 L J 0.9982
1 K K -0.9885
2 L K -0.1694
3 D K -1.0612
4 L K -0.1446
5 K K -1.1966
6 L K -0.1037
7 D K -0.8431
8 L K 0.0137
9 K K -0.9620
10 L K -0.4748
11 D K -1.2186
12 L K 0.6199
1 K L -2.2532
2 L L -0.8659
3 D L -1.1474
4 L L 0.1106
5 K L -0.8188
6 L L 0.1145
7 D L -0.8860
8 L L -0.2274
9 K L -1.0931
10 L L 0.0043
11 D L -0.3661
12 L L 1.4927
1 K M -2.5993
2 L M -1.1043
3 D M -1.1010
4 L M 0.0714
5 K M -0.9820
6 L M 0.0767
7 D M -1.2641
8 L M -0.2683
9 K M -1.1187
10 L M 0.2721
11 D M 0.0355
12 L M 1.9111
1 K N -1.9837
2 L N -0.6338
3 D N -0.9231
4 L N 0.0720
5 K N -1.1786
6 L N -0.3538
7 D N -1.4031
8 L N -0.4874
9 K N -1.2561
10 L N -0.0122
11 D N -0.3498
12 L N 1.4403
1 K O -0.9107
2 L O -0.1413
3 D O -1.3309
4 L O -0.5525
5 K O -1.9839
6 L O -0.6342
7 D O -1.3533
8 L O -0.2189
9 K O -1.1253
10 L O -0.4767
11 D O -1.6212
12 L O 0.3936
1 K P -2.3957
2 L P -0.9529
3 D P -1.4235
4 L P -0.3869
5 K P -1.7949
6 L P -0.7978
7 D P -1.8646
8 L P -0.6248
9 K P -1.4154
10 L P -0.2190
11 D P -0.4264
12 L P 1.4131
1 K Q -2.4289
2 L Q -0.9544
3 D Q -1.5407
4 L Q -0.4100
5 K Q -1.7959
6 L Q -0.8231
7 D Q -1.5175
8 L Q -0.6036
9 K Q -1.2555
10 L Q -0.0707
11 D Q -0.6344
12 L Q 1.3667
1 K R -1.6062
2 L R -0.2559
3 D R 0.0000
4 L R 0.2766
5 K R -1.0608
6 L R -0.0774
7 D R -1.0087
8 L R -0.0632
9 K R -1.2763
10 L R -0.4819
11 D R -1.4299
12 L R 0.5320
1 K S -1.4547
2 L S 0.2781
3 D S -0.8134
4 L S 0.6310
5 K S -1.2582
6 L S 0.2847
7 D S -1.0459
8 L S 0.4327
9 K S -1.0905
10 L S 0.0684
11 D S -1.1426
12 L S 0.5410
1 K T -1.2933
2 L T -0.2447
3 D T 0.0000
4 L T -0.1069
5 K T -1.3350
6 L T -0.3139
7 D T -0.9812
8 L T -0.0579
9 K T -1.1688
10 L T -0.6246
11 D T -1.5655
12 L T 0.3636
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Laboratory of Theory of Biopolymers 2018