| Chain sequence(s) |
A: KLDLKLDLKLDL
C: KLDLKLDLKLDL B: KLDLKLDLKLDL E: KLDLKLDLKLDL D: KLDLKLDLKLDL G: KLDLKLDLKLDL F: KLDLKLDLKLDL I: KLDLKLDLKLDL H: KLDLKLDLKLDL K: KLDLKLDLKLDL J: KLDLKLDLKLDL M: KLDLKLDLKLDL L: KLDLKLDLKLDL O: KLDLKLDLKLDL N: KLDLKLDLKLDL Q: KLDLKLDLKLDL P: KLDLKLDLKLDL S: KLDLKLDLKLDL R: KLDLKLDLKLDL T: KLDLKLDLKLDL input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:21:27)
[INFO] Main: Simulation completed successfully. (00:21:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -1.4283 | |
| 2 | L | A | 0.3336 | |
| 3 | D | A | -1.0007 | |
| 4 | L | A | 0.7767 | |
| 5 | K | A | -1.1023 | |
| 6 | L | A | 0.4711 | |
| 7 | D | A | -1.3969 | |
| 8 | L | A | 0.4630 | |
| 9 | K | A | -0.8383 | |
| 10 | L | A | 0.7967 | |
| 11 | D | A | -0.4392 | |
| 12 | L | A | 1.0904 | |
| 1 | K | B | -1.5614 | |
| 2 | L | B | -0.2549 | |
| 3 | D | B | -1.5052 | |
| 4 | L | B | -0.3262 | |
| 5 | K | B | -1.9742 | |
| 6 | L | B | -0.4520 | |
| 7 | D | B | -1.3882 | |
| 8 | L | B | -0.1360 | |
| 9 | K | B | -1.2808 | |
| 10 | L | B | -0.3417 | |
| 11 | D | B | -1.1799 | |
| 12 | L | B | 0.6862 | |
| 1 | K | C | -1.2616 | |
| 2 | L | C | -0.1064 | |
| 3 | D | C | 0.0000 | |
| 4 | L | C | -0.3060 | |
| 5 | K | C | -2.1446 | |
| 6 | L | C | -0.7937 | |
| 7 | D | C | -2.0478 | |
| 8 | L | C | -0.5519 | |
| 9 | K | C | -1.7886 | |
| 10 | L | C | -0.6326 | |
| 11 | D | C | -1.3622 | |
| 12 | L | C | 0.5696 | |
| 1 | K | D | -2.2095 | |
| 2 | L | D | -0.7730 | |
| 3 | D | D | -1.5909 | |
| 4 | L | D | -0.4901 | |
| 5 | K | D | -2.0084 | |
| 6 | L | D | -0.7359 | |
| 7 | D | D | -1.5462 | |
| 8 | L | D | -0.3766 | |
| 9 | K | D | -1.2008 | |
| 10 | L | D | -0.1393 | |
| 11 | D | D | -0.5219 | |
| 12 | L | D | 1.3618 | |
| 1 | K | E | -2.2679 | |
| 2 | L | E | -0.9657 | |
| 3 | D | E | -1.4866 | |
| 4 | L | E | -0.3477 | |
| 5 | K | E | -1.8078 | |
| 6 | L | E | -0.4991 | |
| 7 | D | E | -1.4124 | |
| 8 | L | E | -0.1723 | |
| 9 | K | E | -1.0531 | |
| 10 | L | E | 0.0537 | |
| 11 | D | E | -0.5108 | |
| 12 | L | E | 1.3765 | |
| 1 | K | F | -0.7366 | |
| 2 | L | F | -0.0648 | |
| 3 | D | F | 0.0000 | |
| 4 | L | F | -0.1608 | |
| 5 | K | F | -1.4659 | |
| 6 | L | F | -0.4301 | |
| 7 | D | F | -1.1506 | |
| 8 | L | F | -0.2938 | |
| 9 | K | F | -1.1462 | |
| 10 | L | F | -0.5101 | |
| 11 | D | F | -1.3703 | |
| 12 | L | F | 0.6140 | |
| 1 | K | G | -1.1673 | |
| 2 | L | G | -0.1327 | |
| 3 | D | G | -0.9746 | |
| 4 | L | G | -0.1045 | |
| 5 | K | G | -1.4769 | |
| 6 | L | G | -0.5956 | |
| 7 | D | G | -1.4600 | |
| 8 | L | G | -0.3448 | |
| 9 | K | G | -1.1286 | |
| 10 | L | G | -0.1115 | |
| 11 | D | G | -0.6551 | |
| 12 | L | G | 1.0665 | |
| 1 | K | H | -0.8245 | |
| 2 | L | H | -0.1509 | |
| 3 | D | H | -1.1607 | |
| 4 | L | H | -0.6014 | |
| 5 | K | H | -2.1489 | |
| 6 | L | H | -1.0405 | |
| 7 | D | H | -1.6570 | |
| 8 | L | H | -0.3304 | |
| 9 | K | H | -1.0326 | |
| 10 | L | H | -0.2024 | |
| 11 | D | H | -1.2498 | |
| 12 | L | H | 0.9586 | |
| 1 | K | I | -0.9218 | |
| 2 | L | I | 0.0264 | |
| 3 | D | I | 0.0000 | |
| 4 | L | I | -0.2588 | |
| 5 | K | I | -1.7458 | |
| 6 | L | I | -0.9553 | |
| 7 | D | I | -1.6005 | |
| 8 | L | I | -0.4394 | |
| 9 | K | I | -1.0649 | |
| 10 | L | I | -0.0794 | |
| 11 | D | I | -0.7269 | |
| 12 | L | I | 1.1513 | |
| 1 | K | J | -0.7474 | |
| 2 | L | J | -0.1764 | |
| 3 | D | J | -0.8919 | |
| 4 | L | J | -0.2114 | |
| 5 | K | J | -1.4500 | |
| 6 | L | J | -0.4770 | |
| 7 | D | J | -1.3764 | |
| 8 | L | J | -0.1897 | |
| 9 | K | J | -1.0444 | |
| 10 | L | J | -0.1729 | |
| 11 | D | J | -1.1838 | |
| 12 | L | J | 0.9982 | |
| 1 | K | K | -0.9885 | |
| 2 | L | K | -0.1694 | |
| 3 | D | K | -1.0612 | |
| 4 | L | K | -0.1446 | |
| 5 | K | K | -1.1966 | |
| 6 | L | K | -0.1037 | |
| 7 | D | K | -0.8431 | |
| 8 | L | K | 0.0137 | |
| 9 | K | K | -0.9620 | |
| 10 | L | K | -0.4748 | |
| 11 | D | K | -1.2186 | |
| 12 | L | K | 0.6199 | |
| 1 | K | L | -2.2532 | |
| 2 | L | L | -0.8659 | |
| 3 | D | L | -1.1474 | |
| 4 | L | L | 0.1106 | |
| 5 | K | L | -0.8188 | |
| 6 | L | L | 0.1145 | |
| 7 | D | L | -0.8860 | |
| 8 | L | L | -0.2274 | |
| 9 | K | L | -1.0931 | |
| 10 | L | L | 0.0043 | |
| 11 | D | L | -0.3661 | |
| 12 | L | L | 1.4927 | |
| 1 | K | M | -2.5993 | |
| 2 | L | M | -1.1043 | |
| 3 | D | M | -1.1010 | |
| 4 | L | M | 0.0714 | |
| 5 | K | M | -0.9820 | |
| 6 | L | M | 0.0767 | |
| 7 | D | M | -1.2641 | |
| 8 | L | M | -0.2683 | |
| 9 | K | M | -1.1187 | |
| 10 | L | M | 0.2721 | |
| 11 | D | M | 0.0355 | |
| 12 | L | M | 1.9111 | |
| 1 | K | N | -1.9837 | |
| 2 | L | N | -0.6338 | |
| 3 | D | N | -0.9231 | |
| 4 | L | N | 0.0720 | |
| 5 | K | N | -1.1786 | |
| 6 | L | N | -0.3538 | |
| 7 | D | N | -1.4031 | |
| 8 | L | N | -0.4874 | |
| 9 | K | N | -1.2561 | |
| 10 | L | N | -0.0122 | |
| 11 | D | N | -0.3498 | |
| 12 | L | N | 1.4403 | |
| 1 | K | O | -0.9107 | |
| 2 | L | O | -0.1413 | |
| 3 | D | O | -1.3309 | |
| 4 | L | O | -0.5525 | |
| 5 | K | O | -1.9839 | |
| 6 | L | O | -0.6342 | |
| 7 | D | O | -1.3533 | |
| 8 | L | O | -0.2189 | |
| 9 | K | O | -1.1253 | |
| 10 | L | O | -0.4767 | |
| 11 | D | O | -1.6212 | |
| 12 | L | O | 0.3936 | |
| 1 | K | P | -2.3957 | |
| 2 | L | P | -0.9529 | |
| 3 | D | P | -1.4235 | |
| 4 | L | P | -0.3869 | |
| 5 | K | P | -1.7949 | |
| 6 | L | P | -0.7978 | |
| 7 | D | P | -1.8646 | |
| 8 | L | P | -0.6248 | |
| 9 | K | P | -1.4154 | |
| 10 | L | P | -0.2190 | |
| 11 | D | P | -0.4264 | |
| 12 | L | P | 1.4131 | |
| 1 | K | Q | -2.4289 | |
| 2 | L | Q | -0.9544 | |
| 3 | D | Q | -1.5407 | |
| 4 | L | Q | -0.4100 | |
| 5 | K | Q | -1.7959 | |
| 6 | L | Q | -0.8231 | |
| 7 | D | Q | -1.5175 | |
| 8 | L | Q | -0.6036 | |
| 9 | K | Q | -1.2555 | |
| 10 | L | Q | -0.0707 | |
| 11 | D | Q | -0.6344 | |
| 12 | L | Q | 1.3667 | |
| 1 | K | R | -1.6062 | |
| 2 | L | R | -0.2559 | |
| 3 | D | R | 0.0000 | |
| 4 | L | R | 0.2766 | |
| 5 | K | R | -1.0608 | |
| 6 | L | R | -0.0774 | |
| 7 | D | R | -1.0087 | |
| 8 | L | R | -0.0632 | |
| 9 | K | R | -1.2763 | |
| 10 | L | R | -0.4819 | |
| 11 | D | R | -1.4299 | |
| 12 | L | R | 0.5320 | |
| 1 | K | S | -1.4547 | |
| 2 | L | S | 0.2781 | |
| 3 | D | S | -0.8134 | |
| 4 | L | S | 0.6310 | |
| 5 | K | S | -1.2582 | |
| 6 | L | S | 0.2847 | |
| 7 | D | S | -1.0459 | |
| 8 | L | S | 0.4327 | |
| 9 | K | S | -1.0905 | |
| 10 | L | S | 0.0684 | |
| 11 | D | S | -1.1426 | |
| 12 | L | S | 0.5410 | |
| 1 | K | T | -1.2933 | |
| 2 | L | T | -0.2447 | |
| 3 | D | T | 0.0000 | |
| 4 | L | T | -0.1069 | |
| 5 | K | T | -1.3350 | |
| 6 | L | T | -0.3139 | |
| 7 | D | T | -0.9812 | |
| 8 | L | T | -0.0579 | |
| 9 | K | T | -1.1688 | |
| 10 | L | T | -0.6246 | |
| 11 | D | T | -1.5655 | |
| 12 | L | T | 0.3636 |