| Chain sequence(s) |
A: KKFIKELLEQGYSKEETAIKVVQKFNVSVVVVTDDEEKAKEIAEYIKKNVPSATVVVYENLIVAKVESHEESTKVWELAQKAY
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:44)
[INFO] Main: Simulation completed successfully. (00:01:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -2.7176 | |
| 2 | K | A | -2.9882 | |
| 3 | F | A | -1.9454 | |
| 4 | I | A | 0.0000 | |
| 5 | K | A | -3.2183 | |
| 6 | E | A | -2.9684 | |
| 7 | L | A | -1.9696 | |
| 8 | L | A | -1.9603 | |
| 9 | E | A | -2.9310 | |
| 10 | Q | A | -2.4236 | |
| 11 | G | A | -1.5310 | |
| 12 | Y | A | -1.0671 | |
| 13 | S | A | -1.3599 | |
| 14 | K | A | -1.4503 | |
| 15 | E | A | -1.9661 | |
| 16 | E | A | -1.4869 | |
| 17 | T | A | 0.0000 | |
| 18 | A | A | 0.0000 | |
| 19 | I | A | 0.5140 | |
| 20 | K | A | -0.8324 | |
| 21 | V | A | 0.0000 | |
| 22 | V | A | -0.1055 | |
| 23 | Q | A | -1.5052 | |
| 24 | K | A | -1.8110 | |
| 25 | F | A | -0.7665 | |
| 26 | N | A | -1.6165 | |
| 27 | V | A | 0.0000 | |
| 28 | S | A | -0.7730 | |
| 29 | V | A | 0.0000 | |
| 30 | V | A | 0.7296 | |
| 31 | V | A | 0.0000 | |
| 32 | V | A | -0.7631 | |
| 33 | T | A | -1.8695 | |
| 34 | D | A | -2.8745 | |
| 35 | D | A | -3.7381 | |
| 36 | E | A | -4.2357 | |
| 37 | E | A | -4.3633 | |
| 38 | K | A | -3.7535 | |
| 39 | A | A | 0.0000 | |
| 40 | K | A | -3.6628 | |
| 41 | E | A | -3.6354 | |
| 42 | I | A | 0.0000 | |
| 43 | A | A | 0.0000 | |
| 44 | E | A | -3.1804 | |
| 45 | Y | A | -1.8651 | |
| 46 | I | A | 0.0000 | |
| 47 | K | A | -2.2819 | |
| 48 | K | A | -2.6539 | |
| 49 | N | A | -1.7217 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.3473 | |
| 52 | S | A | -1.1539 | |
| 53 | A | A | 0.0000 | |
| 54 | T | A | -0.5027 | |
| 55 | V | A | -0.1662 | |
| 56 | V | A | 0.1047 | |
| 57 | V | A | -0.9424 | |
| 58 | Y | A | 0.0000 | |
| 59 | E | A | -2.7083 | |
| 60 | N | A | -2.6516 | |
| 61 | L | A | 0.0000 | |
| 62 | I | A | 0.0000 | |
| 63 | V | A | 0.0000 | |
| 64 | A | A | 0.0000 | |
| 65 | K | A | -1.1138 | |
| 66 | V | A | -1.7414 | |
| 67 | E | A | -2.5506 | |
| 68 | S | A | -2.3755 | |
| 69 | H | A | -2.5965 | |
| 70 | E | A | -3.0796 | |
| 71 | E | A | -2.6040 | |
| 72 | S | A | -2.0182 | |
| 73 | T | A | -1.7541 | |
| 74 | K | A | -2.2386 | |
| 75 | V | A | 0.0000 | |
| 76 | W | A | -0.6759 | |
| 77 | E | A | -1.9087 | |
| 78 | L | A | 0.0000 | |
| 79 | A | A | 0.0000 | |
| 80 | Q | A | -1.0899 | |
| 81 | K | A | -1.7042 | |
| 82 | A | A | -0.7214 | |
| 83 | Y | A | 0.2192 |