Project name: query_structure

Status: done

Started: 2026-03-16 22:47:02
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Chain sequence(s) A: VSSVPTKLEVVAATPTSLLISWDAPAVTVLYYFITYGETGGNSPVQEFAVPGSKSTATISGLKPGVDYTITVYALSSKWRYSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:29)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:30)
Show buried residues

Minimal score value
-2.6353
Maximal score value
1.8487
Average score
-0.4162
Total score value
-37.4566

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.8487
2 S A 0.9120
3 S A 0.6390
4 V A 0.5316
5 P A 0.0000
6 T A -1.5696
7 K A -2.5412
8 L A 0.0000
9 E A -1.6267
10 V A 0.2356
11 V A 1.6059
12 A A 0.9161
13 A A 0.2911
14 T A -0.3515
15 P A -1.1340
16 T A -0.9998
17 S A -0.5477
18 L A 0.0000
19 L A 0.7510
20 I A 0.0000
21 S A -0.8725
22 W A 0.0000
23 D A -2.6353
24 A A -1.1811
25 P A 0.1269
26 A A 0.5657
27 V A 0.7752
28 T A 0.2545
29 V A 0.3820
30 L A 0.9650
31 Y A 1.1167
32 Y A 0.0000
33 F A 0.8392
34 I A 0.0000
35 T A -0.4459
36 Y A 0.0000
37 G A 0.0000
38 E A -1.5894
39 T A -1.2574
40 G A -1.2386
41 G A -1.4021
42 N A -1.5327
43 S A -0.8912
44 P A -0.4315
45 V A 0.2198
46 Q A -1.2267
47 E A -1.5786
48 F A -0.4019
49 A A 0.4089
50 V A 0.0000
51 P A -0.1628
52 G A -0.0759
53 S A -0.8554
54 K A -1.9563
55 S A -1.4647
56 T A -0.7407
57 A A 0.0000
58 T A 0.2253
59 I A 0.0000
60 S A -0.6640
61 G A -1.0309
62 L A 0.0000
63 K A -2.3594
64 P A -1.6439
65 G A -1.4251
66 V A -1.3725
67 D A -2.0848
68 Y A 0.0000
69 T A -0.8208
70 I A 0.0000
71 T A -0.0187
72 V A 0.0000
73 Y A 0.9953
74 A A 0.0000
75 L A 0.0000
76 S A 0.0643
77 S A -0.5821
78 K A -1.5157
79 W A -0.1525
80 R A -1.1243
81 Y A 0.7685
82 S A 0.0000
83 P A 0.3983
84 I A 0.3239
85 S A -0.3061
86 I A -0.6587
87 N A -1.7055
88 Y A -1.4305
89 R A -2.5167
90 T A -1.4937
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Laboratory of Theory of Biopolymers 2018