Project name: c33004d113134dd [mutate: VT52A, LG53A]

Status: done

Started: 2026-05-19 12:33:18
Settings
Chain sequence(s) A: MRFPSIFTAVLFAASSALAAPVNTTTEDETAQIPAEAVIGYSDLEGDFDVAVLPFSNSTNNGLLFINTTIASIAAKEEGVSLEKREEAEAEAEPK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues LG53A,VT52A
Energy difference between WT (input) and mutated protein (by FoldX) 4.10098 kcal/mol

CAUTION: Your mutation/s can destabilize the protein structure

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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       FoldX:    Building mutant model                                                       (00:00:33)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:40)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:07)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:08)
Show buried residues

Minimal score value
-4.7134
Maximal score value
4.072
Average score
-0.2204
Total score value
-20.9409

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.5172
2 R A -0.2793
3 F A 1.4965
4 P A 1.3326
5 S A 1.4308
6 I A 2.8811
7 F A 3.8116
8 T A 3.0247
9 A A 2.9956
10 V A 4.0720
11 L A 3.9694
12 F A 3.7542
13 A A 2.4540
14 A A 2.0379
15 S A 1.7654
16 S A 1.1923
17 A A 1.1076
18 L A 1.6740
19 A A 0.9658
20 A A 0.7361
21 P A 0.4805
22 V A 1.0267
23 N A -0.5435
24 T A -1.0615
25 T A -1.1788
26 T A -2.2577
27 E A -3.2480
28 D A -3.5868
29 E A -3.5053
30 T A -1.8969
31 A A -1.0820
32 Q A -0.7349
33 I A 1.2071
34 P A 0.4441
35 A A 0.4755
36 E A -0.3642
37 A A 0.9886
38 V A 2.4951
39 I A 1.8290
40 G A 0.3597
41 Y A 1.4958
42 S A 0.2677
43 D A -1.7066
44 L A -1.3578
45 E A -2.6625
46 G A -1.7712
47 D A -1.7844
48 F A 0.5364
49 D A 0.4832
50 V A 0.8596
51 A A 1.1848
52 T A 1.6693 mutated: VT52A
53 G A 1.4901 mutated: LG53A
54 P A 1.0779
55 F A 0.7203
56 S A -1.1106
57 N A -1.9942
58 S A -1.4470
59 T A -1.4902
60 N A -2.3009
61 N A -1.7103
62 G A 0.2341
63 L A 2.5321
64 L A 3.1185
65 F A 2.9674
66 I A 2.1958
67 N A 1.0278
68 T A 1.2359
69 T A 1.3735
70 I A 2.4163
71 A A 1.0142
72 S A 0.4051
73 I A 0.9927
74 A A -0.1790
75 A A -1.0928
76 K A -2.3873
77 E A -2.4158
78 E A -2.6328
79 G A -1.8216
80 V A -1.6666
81 S A -1.3227
82 L A -1.1867
83 E A -3.1320
84 K A -3.7783
85 R A -3.6823
86 E A -4.6017
87 E A -4.7134
88 A A -3.8603
89 E A -4.3349
90 A A -3.6433
91 E A -3.9759
92 A A -3.0716
93 E A -3.3419
94 P A -2.3030
95 K A -2.5460
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Laboratory of Theory of Biopolymers 2018