| Chain sequence(s) |
A: MRFPSIFTAVLFAASSALAAPVNTTTEDETAQIPAEAVIGYSDLEGDFDVAVLPFSNSTNNGLLFINTTIASIAAKEEGVSLEKREEAEAEAEPK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | LG53A,VT52A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 4.10098 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:00:33)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:40)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:07)
[INFO] Main: Simulation completed successfully. (00:01:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5172 | |
| 2 | R | A | -0.2793 | |
| 3 | F | A | 1.4965 | |
| 4 | P | A | 1.3326 | |
| 5 | S | A | 1.4308 | |
| 6 | I | A | 2.8811 | |
| 7 | F | A | 3.8116 | |
| 8 | T | A | 3.0247 | |
| 9 | A | A | 2.9956 | |
| 10 | V | A | 4.0720 | |
| 11 | L | A | 3.9694 | |
| 12 | F | A | 3.7542 | |
| 13 | A | A | 2.4540 | |
| 14 | A | A | 2.0379 | |
| 15 | S | A | 1.7654 | |
| 16 | S | A | 1.1923 | |
| 17 | A | A | 1.1076 | |
| 18 | L | A | 1.6740 | |
| 19 | A | A | 0.9658 | |
| 20 | A | A | 0.7361 | |
| 21 | P | A | 0.4805 | |
| 22 | V | A | 1.0267 | |
| 23 | N | A | -0.5435 | |
| 24 | T | A | -1.0615 | |
| 25 | T | A | -1.1788 | |
| 26 | T | A | -2.2577 | |
| 27 | E | A | -3.2480 | |
| 28 | D | A | -3.5868 | |
| 29 | E | A | -3.5053 | |
| 30 | T | A | -1.8969 | |
| 31 | A | A | -1.0820 | |
| 32 | Q | A | -0.7349 | |
| 33 | I | A | 1.2071 | |
| 34 | P | A | 0.4441 | |
| 35 | A | A | 0.4755 | |
| 36 | E | A | -0.3642 | |
| 37 | A | A | 0.9886 | |
| 38 | V | A | 2.4951 | |
| 39 | I | A | 1.8290 | |
| 40 | G | A | 0.3597 | |
| 41 | Y | A | 1.4958 | |
| 42 | S | A | 0.2677 | |
| 43 | D | A | -1.7066 | |
| 44 | L | A | -1.3578 | |
| 45 | E | A | -2.6625 | |
| 46 | G | A | -1.7712 | |
| 47 | D | A | -1.7844 | |
| 48 | F | A | 0.5364 | |
| 49 | D | A | 0.4832 | |
| 50 | V | A | 0.8596 | |
| 51 | A | A | 1.1848 | |
| 52 | T | A | 1.6693 | mutated: VT52A |
| 53 | G | A | 1.4901 | mutated: LG53A |
| 54 | P | A | 1.0779 | |
| 55 | F | A | 0.7203 | |
| 56 | S | A | -1.1106 | |
| 57 | N | A | -1.9942 | |
| 58 | S | A | -1.4470 | |
| 59 | T | A | -1.4902 | |
| 60 | N | A | -2.3009 | |
| 61 | N | A | -1.7103 | |
| 62 | G | A | 0.2341 | |
| 63 | L | A | 2.5321 | |
| 64 | L | A | 3.1185 | |
| 65 | F | A | 2.9674 | |
| 66 | I | A | 2.1958 | |
| 67 | N | A | 1.0278 | |
| 68 | T | A | 1.2359 | |
| 69 | T | A | 1.3735 | |
| 70 | I | A | 2.4163 | |
| 71 | A | A | 1.0142 | |
| 72 | S | A | 0.4051 | |
| 73 | I | A | 0.9927 | |
| 74 | A | A | -0.1790 | |
| 75 | A | A | -1.0928 | |
| 76 | K | A | -2.3873 | |
| 77 | E | A | -2.4158 | |
| 78 | E | A | -2.6328 | |
| 79 | G | A | -1.8216 | |
| 80 | V | A | -1.6666 | |
| 81 | S | A | -1.3227 | |
| 82 | L | A | -1.1867 | |
| 83 | E | A | -3.1320 | |
| 84 | K | A | -3.7783 | |
| 85 | R | A | -3.6823 | |
| 86 | E | A | -4.6017 | |
| 87 | E | A | -4.7134 | |
| 88 | A | A | -3.8603 | |
| 89 | E | A | -4.3349 | |
| 90 | A | A | -3.6433 | |
| 91 | E | A | -3.9759 | |
| 92 | A | A | -3.0716 | |
| 93 | E | A | -3.3419 | |
| 94 | P | A | -2.3030 | |
| 95 | K | A | -2.5460 |