| Chain sequence(s) |
A: RADARADARADARADA
C: RADARADARADARADA B: RADARADARADARADA E: RADARADARADARADA D: RADARADARADARADA G: RADARADARADARADA F: RADARADARADARADA I: RADARADARADARADA H: RADARADARADARADA K: RADARADARADARADA J: RADARADARADARADA L: RADARADARADARADA input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:58)
[INFO] Main: Simulation completed successfully. (00:06:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | R | A | -2.7050 | |
| 2 | A | A | -1.9901 | |
| 3 | D | A | -2.9661 | |
| 4 | A | A | -2.3119 | |
| 5 | R | A | -2.9217 | |
| 6 | A | A | -1.9447 | |
| 7 | D | A | 0.0000 | |
| 8 | A | A | -1.8353 | |
| 9 | R | A | -2.1614 | |
| 10 | A | A | -1.9412 | |
| 11 | D | A | -2.2402 | |
| 12 | A | A | 0.0000 | |
| 13 | R | A | -2.4801 | |
| 14 | A | A | -2.2722 | |
| 15 | D | A | -2.4733 | |
| 16 | A | A | -1.5969 | |
| 1 | R | B | -2.2518 | |
| 2 | A | B | -2.1973 | |
| 3 | D | B | 0.0000 | |
| 4 | A | B | 0.0000 | |
| 5 | R | B | -2.5772 | |
| 6 | A | B | -2.2940 | |
| 7 | D | B | -2.2171 | |
| 8 | A | B | -2.6062 | |
| 9 | R | B | -3.0425 | |
| 10 | A | B | -2.8056 | |
| 11 | D | B | -2.9549 | |
| 12 | A | B | -2.6361 | |
| 13 | R | B | -3.6048 | |
| 14 | A | B | -2.9538 | |
| 15 | D | B | -2.6039 | |
| 16 | A | B | -2.0063 | |
| 1 | R | C | -2.5759 | |
| 2 | A | C | -2.0299 | |
| 3 | D | C | -2.7589 | |
| 4 | A | C | -2.6151 | |
| 5 | R | C | -2.7222 | |
| 6 | A | C | -2.5368 | |
| 7 | D | C | -3.4908 | |
| 8 | A | C | -3.4666 | |
| 9 | R | C | -3.7634 | |
| 10 | A | C | -3.3369 | |
| 11 | D | C | -3.8647 | |
| 12 | A | C | -3.2549 | |
| 13 | R | C | -3.6384 | |
| 14 | A | C | -2.5807 | |
| 15 | D | C | -2.8010 | |
| 16 | A | C | -1.7068 | |
| 1 | R | D | -2.9044 | |
| 2 | A | D | -2.4226 | |
| 3 | D | D | -3.2650 | |
| 4 | A | D | -2.7887 | |
| 5 | R | D | -3.4912 | |
| 6 | A | D | -2.9341 | |
| 7 | D | D | -3.1519 | |
| 8 | A | D | -2.3268 | |
| 9 | R | D | -3.3172 | |
| 10 | A | D | -2.6373 | |
| 11 | D | D | -2.3263 | |
| 12 | A | D | -2.3578 | |
| 13 | R | D | -2.8472 | |
| 14 | A | D | -1.9117 | |
| 15 | D | D | -1.6186 | |
| 16 | A | D | -1.4558 | |
| 1 | R | E | -2.5643 | |
| 2 | A | E | -2.4120 | |
| 3 | D | E | -3.4181 | |
| 4 | A | E | -2.1767 | |
| 5 | R | E | -2.9479 | |
| 6 | A | E | -2.8557 | |
| 7 | D | E | -3.1754 | |
| 8 | A | E | -2.5275 | |
| 9 | R | E | -2.7621 | |
| 10 | A | E | -2.8479 | |
| 11 | D | E | -3.3356 | |
| 12 | A | E | -2.6280 | |
| 13 | R | E | -3.1690 | |
| 14 | A | E | -2.3123 | |
| 15 | D | E | -2.8185 | |
| 16 | A | E | -1.6556 | |
| 1 | R | F | -3.3658 | |
| 2 | A | F | -2.3555 | |
| 3 | D | F | -3.1986 | |
| 4 | A | F | -3.2137 | |
| 5 | R | F | -3.9643 | |
| 6 | A | F | -2.7961 | |
| 7 | D | F | -2.5613 | |
| 8 | A | F | -3.2954 | |
| 9 | R | F | -3.6905 | |
| 10 | A | F | -2.9309 | |
| 11 | D | F | -3.4994 | |
| 12 | A | F | -3.1059 | |
| 13 | R | F | -3.4086 | |
| 14 | A | F | -2.8447 | |
| 15 | D | F | -2.7516 | |
| 16 | A | F | -1.6372 | |
| 1 | R | G | -2.7924 | |
| 2 | A | G | -2.4074 | |
| 3 | D | G | -3.2647 | |
| 4 | A | G | -2.8202 | |
| 5 | R | G | -3.5789 | |
| 6 | A | G | -3.0899 | |
| 7 | D | G | -3.4897 | |
| 8 | A | G | -2.6160 | |
| 9 | R | G | -3.2230 | |
| 10 | A | G | -3.6287 | |
| 11 | D | G | -3.8704 | |
| 12 | A | G | 0.0000 | |
| 13 | R | G | -3.4221 | |
| 14 | A | G | -3.0876 | |
| 15 | D | G | -2.7830 | |
| 16 | A | G | -2.1079 | |
| 1 | R | H | -1.9660 | |
| 2 | A | H | -1.7970 | |
| 3 | D | H | -2.3982 | |
| 4 | A | H | -1.8092 | |
| 5 | R | H | -2.4181 | |
| 6 | A | H | -2.7052 | |
| 7 | D | H | -2.9033 | |
| 8 | A | H | -2.2807 | |
| 9 | R | H | -2.7520 | |
| 10 | A | H | -3.1046 | |
| 11 | D | H | -3.4845 | |
| 12 | A | H | -2.8269 | |
| 13 | R | H | -3.3140 | |
| 14 | A | H | -2.6105 | |
| 15 | D | H | -2.9144 | |
| 16 | A | H | -1.7021 | |
| 1 | R | I | -2.7928 | |
| 2 | A | I | -2.4778 | |
| 3 | D | I | -3.4211 | |
| 4 | A | I | -2.9984 | |
| 5 | R | I | -3.7815 | |
| 6 | A | I | -3.0975 | |
| 7 | D | I | -3.3380 | |
| 8 | A | I | -2.8279 | |
| 9 | R | I | -3.5252 | |
| 10 | A | I | -2.7048 | |
| 11 | D | I | -2.5892 | |
| 12 | A | I | -2.7351 | |
| 13 | R | I | -3.1640 | |
| 14 | A | I | -2.3288 | |
| 15 | D | I | -3.1024 | |
| 16 | A | I | -1.9613 | |
| 1 | R | J | -2.8930 | |
| 2 | A | J | -3.1661 | |
| 3 | D | J | -3.8632 | |
| 4 | A | J | -3.1626 | |
| 5 | R | J | -4.0122 | |
| 6 | A | J | -3.4894 | |
| 7 | D | J | -3.7223 | |
| 8 | A | J | -3.3120 | |
| 9 | R | J | -3.7108 | |
| 10 | A | J | -3.2392 | |
| 11 | D | J | -3.9128 | |
| 12 | A | J | -3.0744 | |
| 13 | R | J | -3.2996 | |
| 14 | A | J | -2.4915 | |
| 15 | D | J | -2.7801 | |
| 16 | A | J | -1.6316 | |
| 1 | R | K | -2.7888 | |
| 2 | A | K | -2.5104 | |
| 3 | D | K | -3.5011 | |
| 4 | A | K | -3.0963 | |
| 5 | R | K | -3.8055 | |
| 6 | A | K | -3.2854 | |
| 7 | D | K | -3.5036 | |
| 8 | A | K | -3.2455 | |
| 9 | R | K | -3.6707 | |
| 10 | A | K | -2.8745 | |
| 11 | D | K | -2.9959 | |
| 12 | A | K | -2.7883 | |
| 13 | R | K | -3.0134 | |
| 14 | A | K | -2.1482 | |
| 15 | D | K | -2.6597 | |
| 16 | A | K | -1.4834 | |
| 1 | R | L | -2.7510 | |
| 2 | A | L | -2.4323 | |
| 3 | D | L | -3.2816 | |
| 4 | A | L | -3.0055 | |
| 5 | R | L | -3.5408 | |
| 6 | A | L | -3.0651 | |
| 7 | D | L | -3.7089 | |
| 8 | A | L | -3.0124 | |
| 9 | R | L | -3.3148 | |
| 10 | A | L | -3.0045 | |
| 11 | D | L | -3.5568 | |
| 12 | A | L | -3.1752 | |
| 13 | R | L | -3.4545 | |
| 14 | A | L | -2.4117 | |
| 15 | D | L | -2.8172 | |
| 16 | A | L | -1.9632 |