| Chain sequence(s) |
C: EVQLVESGGGLVQPGGSLRLSCAASDFTFRSYEMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAIYYCARLRDGFNKGFDYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | C |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | GF113C |
| Energy difference between WT (input) and mutated protein (by FoldX) | 10.2461 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:00:23)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:29)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:54)
[INFO] Main: Simulation completed successfully. (00:00:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | C | -2.0063 | |
| 2 | V | C | -0.9189 | |
| 3 | Q | C | -1.3466 | |
| 4 | L | C | 0.0000 | |
| 5 | V | C | 0.4023 | |
| 6 | E | C | 0.0000 | |
| 7 | S | C | -0.3070 | |
| 8 | G | C | -0.8089 | |
| 9 | G | C | 0.0350 | |
| 10 | G | C | 0.8348 | |
| 11 | L | C | 1.4091 | |
| 12 | V | C | -0.0390 | |
| 13 | Q | C | -1.3371 | |
| 14 | P | C | -1.4887 | |
| 15 | G | C | -1.4134 | |
| 16 | G | C | -0.9785 | |
| 17 | S | C | -1.2309 | |
| 18 | L | C | -0.9631 | |
| 19 | R | C | -2.1463 | |
| 20 | L | C | 0.0000 | |
| 21 | S | C | -0.5558 | |
| 22 | C | C | 0.0000 | |
| 23 | A | C | -0.3088 | |
| 24 | A | C | 0.0000 | |
| 25 | S | C | -0.2594 | |
| 26 | D | C | 0.0000 | |
| 27 | F | C | 1.5458 | |
| 28 | T | C | 0.2525 | |
| 29 | F | C | 0.0000 | |
| 30 | R | C | -2.0328 | |
| 31 | S | C | -0.8867 | |
| 32 | Y | C | -1.2168 | |
| 33 | E | C | -1.1477 | |
| 34 | M | C | 0.0000 | |
| 35 | S | C | 0.0000 | |
| 36 | W | C | 0.0000 | |
| 37 | V | C | 0.0000 | |
| 38 | R | C | 0.0000 | |
| 39 | Q | C | -0.3033 | |
| 40 | A | C | -1.0736 | |
| 41 | P | C | -1.3294 | |
| 42 | G | C | -1.4370 | |
| 43 | K | C | -2.1442 | |
| 44 | G | C | -1.0890 | |
| 45 | L | C | 0.2887 | |
| 46 | E | C | -0.4225 | |
| 47 | W | C | 0.3258 | |
| 48 | V | C | 0.0000 | |
| 49 | S | C | 0.0000 | |
| 50 | A | C | 0.0000 | |
| 51 | I | C | 0.0000 | |
| 52 | S | C | -0.5842 | |
| 53 | G | C | -1.2453 | |
| 54 | S | C | -1.2288 | |
| 55 | G | C | -1.0819 | |
| 56 | G | C | -0.7345 | |
| 57 | S | C | -0.3027 | |
| 58 | T | C | 0.1987 | |
| 59 | Y | C | 0.6074 | |
| 60 | Y | C | -0.3559 | |
| 61 | A | C | -1.1386 | |
| 62 | D | C | -2.3443 | |
| 63 | S | C | -1.7150 | |
| 64 | V | C | 0.0000 | |
| 65 | K | C | -2.3847 | |
| 66 | G | C | -1.6175 | |
| 67 | R | C | 0.0000 | |
| 68 | F | C | 0.0000 | |
| 69 | T | C | -0.6722 | |
| 70 | I | C | 0.0000 | |
| 71 | S | C | -0.5624 | |
| 72 | R | C | -1.3626 | |
| 73 | D | C | -1.9805 | |
| 74 | N | C | -2.1901 | |
| 75 | S | C | -1.7905 | |
| 76 | K | C | -2.3163 | |
| 77 | N | C | -1.6491 | |
| 78 | T | C | 0.0000 | |
| 79 | L | C | 0.0000 | |
| 80 | Y | C | -0.6488 | |
| 81 | L | C | 0.0000 | |
| 82 | Q | C | -1.2337 | |
| 83 | M | C | 0.0000 | |
| 84 | N | C | -1.3327 | |
| 85 | S | C | -1.2322 | |
| 86 | L | C | 0.0000 | |
| 87 | R | C | -2.4722 | |
| 88 | A | C | -1.8896 | |
| 89 | E | C | -2.3446 | |
| 90 | D | C | 0.0000 | |
| 91 | T | C | -0.5112 | |
| 92 | A | C | 0.0000 | |
| 93 | I | C | 0.9733 | |
| 94 | Y | C | 0.0000 | |
| 95 | Y | C | 0.9233 | |
| 96 | C | C | 0.0000 | |
| 97 | A | C | 0.0000 | |
| 98 | R | C | 0.0000 | |
| 99 | L | C | 0.0000 | |
| 100 | R | C | -3.1914 | |
| 101 | D | C | -3.3342 | |
| 102 | G | C | -2.0882 | |
| 103 | F | C | -1.2339 | |
| 104 | N | C | -2.4298 | |
| 105 | K | C | -3.1855 | |
| 106 | G | C | -1.9081 | |
| 107 | F | C | -0.9900 | |
| 108 | D | C | -1.1035 | |
| 109 | Y | C | -0.2194 | |
| 110 | W | C | 0.6531 | |
| 111 | G | C | 0.1359 | |
| 112 | Q | C | -0.5234 | |
| 113 | F | C | 0.9114 | mutated: GF113C |
| 114 | T | C | 0.8406 | |
| 115 | L | C | 1.6706 | |
| 116 | V | C | 0.0000 | |
| 117 | T | C | 0.2422 | |
| 118 | V | C | 0.0000 | |
| 119 | S | C | -0.7746 | |
| 120 | S | C | -1.0601 |