| Chain sequence(s) |
H: QVQLVESGGGLVQPGGSLRLSCAASGSISSHNDMSWYRQAPGNQLELVSFIASGGSTYYADSVKGRFTISRDHAKNTLYLQMNSLRAEDTAVYYCNSRTYDGEKTYWGQGTTVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:54)
[INFO] Main: Simulation completed successfully. (00:00:54)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.5028 | |
| 2 | V | H | -0.9911 | |
| 3 | Q | H | -1.0878 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.1088 | |
| 6 | E | H | 0.2864 | |
| 7 | S | H | -0.3658 | |
| 8 | G | H | -0.7835 | |
| 9 | G | H | -0.2288 | |
| 11 | G | H | 0.4515 | |
| 12 | L | H | 1.2439 | |
| 13 | V | H | 0.0337 | |
| 14 | Q | H | -1.3374 | |
| 15 | P | H | -1.3922 | |
| 16 | G | H | -1.3852 | |
| 17 | G | H | -0.9400 | |
| 18 | S | H | -0.9719 | |
| 19 | L | H | -0.3681 | |
| 20 | R | H | -1.1283 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.1870 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.0812 | |
| 25 | A | H | -0.3753 | |
| 26 | S | H | -0.5656 | |
| 27 | G | H | -0.7623 | |
| 28 | S | H | -0.7774 | |
| 29 | I | H | 0.0000 | |
| 30 | S | H | -1.2582 | |
| 35 | S | H | -1.1517 | |
| 36 | H | H | -1.2529 | |
| 37 | N | H | -0.9174 | |
| 38 | D | H | -0.8642 | |
| 39 | M | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | Y | H | 0.4585 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.9166 | |
| 45 | A | H | -1.3024 | |
| 46 | P | H | -1.1069 | |
| 47 | G | H | -1.4573 | |
| 48 | N | H | -2.2198 | |
| 49 | Q | H | -1.8316 | |
| 50 | L | H | -0.4122 | |
| 51 | E | H | -0.5630 | |
| 52 | L | H | 0.5925 | |
| 53 | V | H | 0.0000 | |
| 54 | S | H | 0.0000 | |
| 55 | F | H | 0.7129 | |
| 56 | I | H | 0.0000 | |
| 57 | A | H | -0.6200 | |
| 58 | S | H | -1.1775 | |
| 59 | G | H | -1.0040 | |
| 63 | G | H | -0.6493 | |
| 64 | S | H | -0.2007 | |
| 65 | T | H | 0.4840 | |
| 66 | Y | H | 1.0798 | |
| 67 | Y | H | -0.0036 | |
| 68 | A | H | -0.8943 | |
| 69 | D | H | -2.3058 | |
| 70 | S | H | -1.7184 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.4041 | |
| 74 | G | H | -1.7503 | |
| 75 | R | H | -1.5969 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.5489 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.4454 | |
| 80 | R | H | -1.1487 | |
| 81 | D | H | -1.7622 | |
| 82 | H | H | -1.7928 | |
| 83 | A | H | -1.4356 | |
| 84 | K | H | -2.2649 | |
| 85 | N | H | -1.7275 | |
| 86 | T | H | 0.0000 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.4015 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.8086 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.1924 | |
| 93 | S | H | -1.2105 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.2172 | |
| 96 | A | H | -1.6590 | |
| 97 | E | H | -2.1881 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.6315 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.2143 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.4665 | |
| 104 | C | H | 0.0000 | |
| 105 | N | H | 0.0000 | |
| 106 | S | H | 0.0000 | |
| 107 | R | H | -1.0160 | |
| 108 | T | H | -1.1228 | |
| 109 | Y | H | -0.6605 | |
| 110 | D | H | -2.0497 | |
| 113 | G | H | -2.0666 | |
| 114 | E | H | -2.6299 | |
| 115 | K | H | -1.9783 | |
| 116 | T | H | -0.7507 | |
| 117 | Y | H | -0.3483 | |
| 118 | W | H | 0.2229 | |
| 119 | G | H | -0.0223 | |
| 120 | Q | H | -0.8138 | |
| 121 | G | H | -0.2006 | |
| 122 | T | H | -0.1551 | |
| 123 | T | H | -0.0005 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.0153 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5631 | |
| 128 | S | H | -0.5048 |