Project name: 22-4.pdb

Status: done

Started: 2026-03-19 06:13:45
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Chain sequence(s) H: QVQLVESGGGLVQPGGSLRLSCAASGSISSHNDMSWYRQAPGNQLELVSFIASGGSTYYADSVKGRFTISRDHAKNTLYLQMNSLRAEDTAVYYCNSRTYDGEKTYWGQGTTVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:54)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:54)
Show buried residues

Minimal score value
-2.6299
Maximal score value
1.2439
Average score
-0.6304
Total score value
-73.7576

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.5028
2 V H -0.9911
3 Q H -1.0878
4 L H 0.0000
5 V H 1.1088
6 E H 0.2864
7 S H -0.3658
8 G H -0.7835
9 G H -0.2288
11 G H 0.4515
12 L H 1.2439
13 V H 0.0337
14 Q H -1.3374
15 P H -1.3922
16 G H -1.3852
17 G H -0.9400
18 S H -0.9719
19 L H -0.3681
20 R H -1.1283
21 L H 0.0000
22 S H -0.1870
23 C H 0.0000
24 A H -0.0812
25 A H -0.3753
26 S H -0.5656
27 G H -0.7623
28 S H -0.7774
29 I H 0.0000
30 S H -1.2582
35 S H -1.1517
36 H H -1.2529
37 N H -0.9174
38 D H -0.8642
39 M H 0.0000
40 S H 0.0000
41 W H 0.0000
42 Y H 0.4585
43 R H 0.0000
44 Q H -0.9166
45 A H -1.3024
46 P H -1.1069
47 G H -1.4573
48 N H -2.2198
49 Q H -1.8316
50 L H -0.4122
51 E H -0.5630
52 L H 0.5925
53 V H 0.0000
54 S H 0.0000
55 F H 0.7129
56 I H 0.0000
57 A H -0.6200
58 S H -1.1775
59 G H -1.0040
63 G H -0.6493
64 S H -0.2007
65 T H 0.4840
66 Y H 1.0798
67 Y H -0.0036
68 A H -0.8943
69 D H -2.3058
70 S H -1.7184
71 V H 0.0000
72 K H -2.4041
74 G H -1.7503
75 R H -1.5969
76 F H 0.0000
77 T H -0.5489
78 I H 0.0000
79 S H -0.4454
80 R H -1.1487
81 D H -1.7622
82 H H -1.7928
83 A H -1.4356
84 K H -2.2649
85 N H -1.7275
86 T H 0.0000
87 L H 0.0000
88 Y H -0.4015
89 L H 0.0000
90 Q H -0.8086
91 M H 0.0000
92 N H -1.1924
93 S H -1.2105
94 L H 0.0000
95 R H -2.2172
96 A H -1.6590
97 E H -2.1881
98 D H 0.0000
99 T H -0.6315
100 A H 0.0000
101 V H 0.2143
102 Y H 0.0000
103 Y H 0.4665
104 C H 0.0000
105 N H 0.0000
106 S H 0.0000
107 R H -1.0160
108 T H -1.1228
109 Y H -0.6605
110 D H -2.0497
113 G H -2.0666
114 E H -2.6299
115 K H -1.9783
116 T H -0.7507
117 Y H -0.3483
118 W H 0.2229
119 G H -0.0223
120 Q H -0.8138
121 G H -0.2006
122 T H -0.1551
123 T H -0.0005
124 V H 0.0000
125 T H 0.0153
126 V H 0.0000
127 S H -0.5631
128 S H -0.5048
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Laboratory of Theory of Biopolymers 2018