| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFADIVKDGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTTPVHEGADVRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPDGHPLPDAPPPSPLYVPPPPDSPWAVRPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPKEKVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9507 | |
| 2 | L | A | 1.9797 | |
| 3 | P | A | 0.7079 | |
| 4 | P | A | 0.1149 | |
| 5 | T | A | 0.2072 | |
| 6 | T | A | 0.1634 | |
| 7 | P | A | 0.2635 | |
| 8 | V | A | 1.2517 | |
| 9 | A | A | 0.0499 | |
| 10 | K | A | -1.1196 | |
| 11 | V | A | -0.3429 | |
| 12 | Q | A | -1.4826 | |
| 13 | S | A | -1.6527 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.6730 | |
| 16 | E | A | -2.5732 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4176 | |
| 20 | P | A | 0.0283 | |
| 21 | T | A | 0.1057 | |
| 22 | S | A | -0.1782 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0701 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2476 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7274 | |
| 31 | R | A | -2.6810 | |
| 32 | L | A | -0.8453 | |
| 33 | L | A | 1.0562 | |
| 34 | T | A | 1.3420 | |
| 35 | V | A | 1.8903 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.3034 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | 0.1931 | |
| 40 | A | A | -0.0516 | |
| 41 | D | A | -0.0372 | |
| 42 | I | A | 1.6425 | |
| 43 | V | A | 1.2901 | |
| 44 | K | A | -1.3519 | |
| 45 | D | A | -2.4580 | |
| 46 | G | A | -1.4593 | |
| 47 | K | A | -1.1153 | |
| 48 | V | A | 1.5811 | |
| 49 | V | A | 2.0485 | |
| 50 | V | A | 1.6197 | |
| 51 | P | A | 0.8747 | |
| 52 | K | A | 0.0283 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1915 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.6339 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3331 | |
| 70 | K | A | -1.8699 | |
| 71 | F | A | -0.9314 | |
| 72 | A | A | -0.6043 | |
| 73 | L | A | -0.9422 | |
| 74 | P | A | -1.2569 | |
| 75 | Q | A | -2.4746 | |
| 76 | K | A | -3.0905 | |
| 77 | D | A | -2.9779 | |
| 78 | F | A | -1.6436 | |
| 79 | Y | A | -1.9111 | |
| 80 | D | A | -2.7235 | |
| 81 | P | A | -2.4075 | |
| 82 | E | A | -3.0466 | |
| 83 | K | A | -3.3916 | |
| 84 | E | A | -2.4543 | |
| 85 | R | A | -1.2848 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.5074 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -1.0175 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3847 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.8010 | |
| 99 | G | A | -0.6114 | |
| 100 | P | A | -0.4468 | |
| 101 | L | A | -0.0831 | |
| 102 | G | A | -0.3973 | |
| 103 | K | A | -0.9663 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.5099 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1584 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4610 | |
| 110 | L | A | 0.4392 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -0.9594 | |
| 113 | K | A | -0.1899 | |
| 114 | L | A | -0.8119 | |
| 115 | G | A | -0.6561 | |
| 116 | D | A | -1.3796 | |
| 117 | T | A | -1.1838 | |
| 118 | E | A | -2.3687 | |
| 119 | N | A | -2.1843 | |
| 120 | P | A | -1.4333 | |
| 121 | T | A | -0.8773 | |
| 122 | T | A | -0.6537 | |
| 123 | P | A | -0.7790 | |
| 124 | V | A | -0.6972 | |
| 125 | H | A | -1.9109 | |
| 126 | E | A | -2.5842 | |
| 127 | G | A | -2.0831 | |
| 128 | A | A | -1.5098 | |
| 129 | D | A | -2.1985 | |
| 130 | V | A | -1.4600 | |
| 131 | R | A | -0.6366 | |
| 132 | V | A | 0.5641 | |
| 133 | A | A | 0.5146 | |
| 134 | F | A | 0.3378 | |
| 135 | S | A | -0.0459 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7827 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.1410 | |
| 140 | Q | A | -0.1914 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5489 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2173 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0581 | |
| 157 | D | A | 0.2249 | |
| 158 | L | A | 0.5466 | |
| 159 | A | A | -0.0439 | |
| 160 | E | A | -1.5446 | |
| 161 | P | A | -0.3235 | |
| 162 | C | A | 0.1588 | |
| 163 | P | A | -0.2070 | |
| 164 | G | A | -0.1356 | |
| 165 | L | A | 0.4767 | |
| 166 | P | A | -0.1816 | |
| 167 | P | A | -0.3715 | |
| 168 | G | A | -0.4392 | |
| 169 | A | A | -0.0487 | |
| 170 | C | A | 0.6192 | |
| 171 | P | A | 0.4663 | |
| 172 | P | A | 0.5928 | |
| 173 | I | A | 1.6205 | |
| 174 | Q | A | 0.6439 | |
| 175 | L | A | 1.3151 | |
| 176 | V | A | 0.7784 | |
| 177 | N | A | -0.3342 | |
| 178 | S | A | -0.0180 | |
| 179 | V | A | 0.3180 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3823 | |
| 182 | D | A | 0.2734 | |
| 183 | G | A | -0.1602 | |
| 184 | D | A | -0.5378 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4181 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1042 | |
| 190 | F | A | 0.0946 | |
| 191 | G | A | -0.0604 | |
| 192 | N | A | -0.2457 | |
| 193 | M | A | -0.0963 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.2717 | |
| 197 | E | A | -2.4151 | |
| 198 | L | A | -1.1748 | |
| 199 | Q | A | -2.4785 | |
| 200 | Q | A | -3.2687 | |
| 201 | D | A | -3.5593 | |
| 202 | R | A | -3.3412 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.4033 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | 0.0000 | |
| 211 | S | A | -1.7142 | |
| 212 | T | A | -1.4085 | |
| 213 | R | A | -1.9039 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1980 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3298 | |
| 220 | L | A | 0.5420 | |
| 221 | K | A | -1.2386 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9149 | |
| 224 | N | A | -1.6406 | |
| 225 | E | A | -1.2474 | |
| 226 | A | A | -0.7760 | |
| 227 | Y | A | -0.4046 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6467 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1021 | |
| 234 | F | A | 0.1444 | |
| 235 | G | A | -0.7158 | |
| 236 | R | A | -2.2036 | |
| 237 | R | A | -2.5773 | |
| 238 | E | A | -1.6076 | |
| 239 | Q | A | 0.0599 | |
| 240 | V | A | 1.4354 | |
| 241 | Y | A | 0.9599 | |
| 242 | A | A | 0.0117 | |
| 243 | R | A | -1.2969 | |
| 244 | H | A | -1.0334 | |
| 245 | F | A | -0.2123 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | -0.1457 | |
| 248 | R | A | -0.7048 | |
| 249 | A | A | -1.1443 | |
| 250 | G | A | -0.8820 | |
| 251 | P | A | -1.1090 | |
| 252 | D | A | -1.3677 | |
| 253 | G | A | -1.2675 | |
| 254 | H | A | -1.3821 | |
| 255 | P | A | -1.2891 | |
| 256 | L | A | -0.3259 | |
| 257 | P | A | -0.8363 | |
| 258 | D | A | -1.5076 | |
| 259 | A | A | 0.0000 | |
| 260 | P | A | -0.5379 | |
| 261 | P | A | -0.2098 | |
| 262 | P | A | 0.0147 | |
| 263 | S | A | 0.2556 | |
| 264 | P | A | 0.7041 | |
| 265 | L | A | 1.6439 | |
| 266 | Y | A | 1.4892 | |
| 267 | V | A | 1.7196 | |
| 268 | P | A | 0.5993 | |
| 269 | P | A | 0.1822 | |
| 270 | P | A | -0.6700 | |
| 271 | P | A | -0.9339 | |
| 272 | D | A | -1.7110 | |
| 273 | S | A | -0.4978 | |
| 274 | P | A | 0.0927 | |
| 275 | W | A | 1.0392 | |
| 276 | A | A | 0.5132 | |
| 277 | V | A | 1.4166 | |
| 278 | R | A | 0.2376 | |
| 279 | P | A | -0.2214 | |
| 280 | S | A | -0.6313 | |
| 281 | T | A | -0.5194 | |
| 282 | D | A | -0.7779 | |
| 283 | Y | A | 0.8952 | |
| 284 | F | A | 0.7106 | |
| 285 | G | A | 0.2610 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.5733 | |
| 291 | L | A | 1.5442 | |
| 292 | V | A | 0.4674 | |
| 293 | S | A | -0.2138 | |
| 294 | S | A | -0.8713 | |
| 295 | D | A | -1.9118 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | -1.0933 | |
| 298 | L | A | -1.1338 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.7307 | |
| 301 | R | A | -2.0383 | |
| 302 | P | A | -1.0311 | |
| 303 | F | A | -0.1695 | |
| 304 | W | A | -0.3457 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.1656 | |
| 307 | R | A | -2.9110 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7794 | |
| 310 | G | A | -1.3746 | |
| 311 | N | A | -1.3870 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7773 | |
| 319 | N | A | -0.8578 | |
| 320 | E | A | -1.0171 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.4632 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.3057 | |
| 333 | N | A | 0.3249 | |
| 334 | F | A | 1.4140 | |
| 335 | T | A | 0.7785 | |
| 336 | I | A | 0.3652 | |
| 337 | S | A | -0.9193 | |
| 338 | Q | A | -1.5518 | |
| 339 | Q | A | -1.3808 | |
| 340 | L | A | 0.2987 | |
| 341 | S | A | -0.2714 | |
| 342 | T | A | -0.7943 | |
| 343 | P | A | -1.5774 | |
| 344 | K | A | -2.5381 | |
| 345 | E | A | -2.1326 | |
| 346 | K | A | -1.6544 | |
| 347 | V | A | 0.7858 | |
| 348 | Y | A | 1.0826 | |
| 349 | D | A | -0.3057 | |
| 350 | P | A | -0.7865 | |
| 351 | S | A | -0.4826 | |
| 352 | N | A | -0.5827 | |
| 353 | F | A | -0.8696 | |
| 354 | K | A | -2.0593 | |
| 355 | N | A | -1.7710 | |
| 356 | Y | A | -0.0901 | |
| 357 | L | A | 0.7410 | |
| 358 | R | A | 0.9256 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.1262 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.3471 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9478 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6534 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2721 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.2914 | |
| 376 | L | A | -1.6862 | |
| 377 | D | A | -1.9492 | |
| 378 | P | A | -1.0214 | |
| 379 | G | A | -1.0011 | |
| 380 | V | A | -0.9138 | |
| 381 | L | A | -0.5093 | |
| 382 | A | A | -0.6398 | |
| 383 | H | A | -0.8201 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3801 | |
| 386 | T | A | -0.5609 | |
| 387 | M | A | -0.3320 | |
| 388 | N | A | -0.8776 | |
| 389 | P | A | -1.2386 | |
| 390 | T | A | -1.4789 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4536 | |
| 393 | E | A | -2.8182 | |
| 394 | N | A | -2.1388 | |
| 395 | W | A | -1.4518 | |
| 396 | N | A | -1.3146 | |
| 397 | L | A | -0.2138 | |
| 398 | G | A | 0.5580 | |
| 399 | F | A | 2.3780 | |
| 400 | V | A | 1.7693 | |
| 401 | P | A | 0.0472 | |
| 402 | P | A | -1.9070 | |
| 403 | K | A | -3.2770 | |
| 404 | E | A | -3.8272 | |
| 405 | R | A | -4.0530 | |
| 406 | E | A | -3.8171 | |
| 407 | D | A | -2.8520 | |
| 408 | P | A | -1.7556 | |
| 409 | Y | A | -0.9969 | |
| 410 | K | A | -2.1062 | |
| 411 | G | A | -0.6297 | |
| 412 | L | A | 0.6630 | |
| 413 | I | A | 1.6479 | |
| 414 | F | A | 0.7124 | |
| 415 | W | A | -0.2727 | |
| 416 | E | A | -1.5997 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9621 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.1174 | |
| 421 | E | A | -2.8314 | |
| 422 | R | A | -2.3884 | |
| 423 | F | A | -1.2932 | |
| 424 | S | A | -1.5109 | |
| 425 | Q | A | -1.8455 | |
| 426 | D | A | -3.0127 | |
| 427 | L | A | 0.0000 | |
| 428 | D | A | -2.9234 | |
| 429 | Q | A | -2.6730 | |
| 430 | F | A | -1.4702 | |
| 431 | A | A | -0.9143 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6919 | |
| 435 | K | A | -0.8397 | |
| 436 | F | A | 0.1086 | |
| 437 | L | A | 0.9354 | |
| 438 | Y | A | 0.7956 | |
| 439 | Q | A | -0.3158 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine