Project name: 197

Status: done

Started: 2025-06-23 11:33:20
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Chain sequence(s) H: DVQLQESGGGSVQAGGSLRLSCAASGNPYSHYWLGWFRQTPGKEREGVAVIYTGDGDGTTYYTDSVKGRFTVSQDNGKNTLYLQMNNLKPEDTAMYYCALRGNDGSWFSPLQPGHYTYWGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:58)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:59)
Show buried residues

Minimal score value
-2.8951
Maximal score value
1.0917
Average score
-0.9645
Total score value
-124.4141

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D H -2.3782
2 V H 0.0000
3 Q H -2.0526
4 L H -1.3915
5 Q H -1.6641
6 E H 0.0000
7 S H -0.9976
8 G H -0.9471
9 G H -0.8682
11 G H -0.6785
12 S H -0.5827
13 V H -0.7520
14 Q H -1.7635
15 A H -1.9072
16 G H -1.8688
17 G H -1.4141
18 S H -1.3348
19 L H -0.8637
20 R H -1.4343
21 L H 0.0000
22 S H -0.6866
23 C H 0.0000
24 A H -0.9638
25 A H 0.0000
26 S H -1.7549
27 G H -1.8122
28 N H -1.8639
29 P H -1.3634
30 Y H -0.3704
35 S H -1.0154
36 H H -1.6176
37 Y H 0.0000
38 W H 0.0000
39 L H 0.0000
40 G H 0.0000
41 W H 0.0000
42 F H 0.0000
43 R H 0.0000
44 Q H -1.7061
45 T H -1.5300
46 P H -1.1127
47 G H -1.4754
48 K H -2.2638
49 E H -2.8951
50 R H -2.1872
51 E H -1.5734
52 G H -0.7398
53 V H 0.0000
54 A H 0.0000
55 V H 0.0000
56 I H 0.0000
57 Y H -0.4706
58 T H -1.3432
59 G H -2.2184
60 D H -2.7822
61 G H -2.3443
62 D H -2.5648
63 G H -1.4417
64 T H -0.4368
65 T H 0.2596
66 Y H 0.6357
67 Y H -0.3867
68 T H -1.2137
69 D H -2.4053
70 S H -1.8852
71 V H 0.0000
72 K H -2.5096
74 G H -1.8884
75 R H -2.0277
76 F H 0.0000
77 T H -0.6407
78 V H 0.0000
79 S H -0.5395
80 Q H -1.4262
81 D H -2.0547
82 N H -2.5641
83 G H -2.1790
84 K H -2.7343
85 N H -2.0689
86 T H -1.4505
87 L H 0.0000
88 Y H -0.4231
89 L H 0.0000
90 Q H -0.9497
91 M H 0.0000
92 N H -1.7525
93 N H -2.3121
94 L H 0.0000
95 K H -2.6992
96 P H -1.9120
97 E H -2.3527
98 D H 0.0000
99 T H -1.0942
100 A H 0.0000
101 M H -0.4583
102 Y H 0.0000
103 Y H -0.4377
104 C H 0.0000
105 A H 0.0000
106 L H 0.0000
107 R H 0.0000
108 G H -1.5384
109 N H -2.2149
110 D H -2.4026
111 G H -0.8473
111A S H -0.0554
111B W H 0.9827
111C F H 1.0917
112D S H 0.4151
112C P H 0.0000
112B L H -0.1966
112A Q H -1.4690
112 P H -1.2634
113 G H -1.2119
114 H H -1.7120
115 Y H 0.0000
116 T H -0.6956
117 Y H -0.3343
118 W H -0.1696
119 G H -0.9306
120 Q H -1.3698
121 G H -0.8892
122 T H -0.8500
123 Q H -0.8440
124 V H 0.0000
125 T H -0.8652
126 V H 0.0000
127 S H -1.2133
128 S H -0.9272
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Laboratory of Theory of Biopolymers 2018