| Chain sequence(s) |
A: GHKGHKS
C: GHKGHKS B: GHKGHKS E: GHKGHKS D: GHKGHKS G: GHKGHKS F: GHKGHKS I: GHKGHKS H: GHKGHKS K: GHKGHKS J: GHKGHKS M: GHKGHKS L: GHKGHKS O: GHKGHKS N: GHKGHKS Q: GHKGHKS P: GHKGHKS S: GHKGHKS R: GHKGHKS T: GHKGHKS input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:11:38)
[INFO] Main: Simulation completed successfully. (00:11:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.6042 | |
| 2 | H | A | -1.8285 | |
| 3 | K | A | -2.4720 | |
| 4 | G | A | 0.0000 | |
| 5 | H | A | 0.0000 | |
| 6 | K | A | -2.2867 | |
| 7 | S | A | -1.3065 | |
| 1 | G | B | -1.7401 | |
| 2 | H | B | -2.0405 | |
| 3 | K | B | -2.5990 | |
| 4 | G | B | 0.0000 | |
| 5 | H | B | 0.0000 | |
| 6 | K | B | -2.1937 | |
| 7 | S | B | -1.2593 | |
| 1 | G | C | -1.9648 | |
| 2 | H | C | -2.5352 | |
| 3 | K | C | -3.2497 | |
| 4 | G | C | 0.0000 | |
| 5 | H | C | -2.7090 | |
| 6 | K | C | -2.4709 | |
| 7 | S | C | -1.3879 | |
| 1 | G | D | -1.7515 | |
| 2 | H | D | -2.9007 | |
| 3 | K | D | -3.6348 | |
| 4 | G | D | -2.7842 | |
| 5 | H | D | -2.8598 | |
| 6 | K | D | -2.7096 | |
| 7 | S | D | -1.3425 | |
| 1 | G | E | -1.4372 | |
| 2 | H | E | -2.1595 | |
| 3 | K | E | -3.0268 | |
| 4 | G | E | 0.0000 | |
| 5 | H | E | -2.5539 | |
| 6 | K | E | -2.7070 | |
| 7 | S | E | -1.3722 | |
| 1 | G | F | -1.7122 | |
| 2 | H | F | -2.0756 | |
| 3 | K | F | -2.8472 | |
| 4 | G | F | 0.0000 | |
| 5 | H | F | 0.0000 | |
| 6 | K | F | -2.3621 | |
| 7 | S | F | -1.3955 | |
| 1 | G | G | -1.5591 | |
| 2 | H | G | -1.7811 | |
| 3 | K | G | -2.3837 | |
| 4 | G | G | 0.0000 | |
| 5 | H | G | 0.0000 | |
| 6 | K | G | -2.0565 | |
| 7 | S | G | -1.1358 | |
| 1 | G | H | -1.4968 | |
| 2 | H | H | -1.7722 | |
| 3 | K | H | -2.3226 | |
| 4 | G | H | 0.0000 | |
| 5 | H | H | 0.0000 | |
| 6 | K | H | -1.9473 | |
| 7 | S | H | -1.1660 | |
| 1 | G | I | -1.5260 | |
| 2 | H | I | -1.8634 | |
| 3 | K | I | -2.4766 | |
| 4 | G | I | 0.0000 | |
| 5 | H | I | 0.0000 | |
| 6 | K | I | -1.9796 | |
| 7 | S | I | -1.1309 | |
| 1 | G | J | -1.5172 | |
| 2 | H | J | -1.8695 | |
| 3 | K | J | -2.3496 | |
| 4 | G | J | 0.0000 | |
| 5 | H | J | 0.0000 | |
| 6 | K | J | -1.8936 | |
| 7 | S | J | -1.1377 | |
| 1 | G | K | -1.6034 | |
| 2 | H | K | -2.0882 | |
| 3 | K | K | -2.7579 | |
| 4 | G | K | 0.0000 | |
| 5 | H | K | 0.0000 | |
| 6 | K | K | -2.3059 | |
| 7 | S | K | -1.2431 | |
| 1 | G | L | -1.9032 | |
| 2 | H | L | -2.6181 | |
| 3 | K | L | -3.3208 | |
| 4 | G | L | 0.0000 | |
| 5 | H | L | 0.0000 | |
| 6 | K | L | -2.6245 | |
| 7 | S | L | -1.5251 | |
| 1 | G | M | -1.8604 | |
| 2 | H | M | -2.6147 | |
| 3 | K | M | -3.4757 | |
| 4 | G | M | -2.6961 | |
| 5 | H | M | -2.8124 | |
| 6 | K | M | -2.8537 | |
| 7 | S | M | -1.4317 | |
| 1 | G | N | -1.5315 | |
| 2 | H | N | -2.1540 | |
| 3 | K | N | -3.2456 | |
| 4 | G | N | -2.5986 | |
| 5 | H | N | -2.7138 | |
| 6 | K | N | -2.8556 | |
| 7 | S | N | -1.4118 | |
| 1 | G | O | -1.5542 | |
| 2 | H | O | -2.0533 | |
| 3 | K | O | -2.8201 | |
| 4 | G | O | 0.0000 | |
| 5 | H | O | 0.0000 | |
| 6 | K | O | -2.4219 | |
| 7 | S | O | -1.4295 | |
| 1 | G | P | -1.3844 | |
| 2 | H | P | -1.6003 | |
| 3 | K | P | -1.9919 | |
| 4 | G | P | 0.0000 | |
| 5 | H | P | 0.0000 | |
| 6 | K | P | -1.8073 | |
| 7 | S | P | -1.0057 | |
| 1 | G | Q | -1.3736 | |
| 2 | H | Q | -1.6338 | |
| 3 | K | Q | -2.1141 | |
| 4 | G | Q | 0.0000 | |
| 5 | H | Q | 0.0000 | |
| 6 | K | Q | -1.4822 | |
| 7 | S | Q | -0.9273 | |
| 1 | G | R | -1.3634 | |
| 2 | H | R | -1.6060 | |
| 3 | K | R | -1.7834 | |
| 4 | G | R | 0.0000 | |
| 5 | H | R | 0.0000 | |
| 6 | K | R | -1.4326 | |
| 7 | S | R | -0.8961 | |
| 1 | G | S | -1.3580 | |
| 2 | H | S | -1.4565 | |
| 3 | K | S | -1.7435 | |
| 4 | G | S | 0.0000 | |
| 5 | H | S | 0.0000 | |
| 6 | K | S | -1.3519 | |
| 7 | S | S | -0.9055 | |
| 1 | G | T | -1.4557 | |
| 2 | H | T | -1.6629 | |
| 3 | K | T | -2.0934 | |
| 4 | G | T | 0.0000 | |
| 5 | H | T | 0.0000 | |
| 6 | K | T | -1.7551 | |
| 7 | S | T | -1.1098 |