| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASGTIAGKPIGDYMHWVRQAPGKGLEWVGLIKETIYDPKFQDRATISADNSKNTAYLQMNSLRAEDTAVYYCARFFVRDGKPVAIWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
L: DIQMTQSPSSLSASVGDRVTITCSTAQPPSGWTMSWYQQKPGKAPKVLIYGPFRKPPGVPSRFSGSGSGTDYTLTISSLQPEDFATYYCALIKPYATFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:09:01)
[INFO] Main: Simulation completed successfully. (00:09:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.0164 | |
| 2 | V | H | -1.0872 | |
| 3 | Q | H | -1.0625 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.0680 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.3527 | |
| 8 | G | H | -0.8643 | |
| 9 | G | H | -0.5195 | |
| 10 | G | H | -0.3569 | |
| 11 | L | H | -0.1340 | |
| 12 | V | H | 0.0000 | |
| 13 | Q | H | -1.7402 | |
| 14 | P | H | -1.9346 | |
| 15 | G | H | -1.5884 | |
| 16 | G | H | -1.2779 | |
| 17 | S | H | -1.4329 | |
| 18 | L | H | -1.2435 | |
| 19 | R | H | -2.1359 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.4136 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.0869 | |
| 24 | A | H | -0.3771 | |
| 25 | S | H | -0.8335 | |
| 26 | G | H | -1.2016 | |
| 27 | T | H | -1.0289 | |
| 28 | I | H | -0.5893 | |
| 29 | A | H | -0.7101 | |
| 30 | G | H | -1.2915 | |
| 31 | K | H | -2.1307 | |
| 32 | P | H | -1.6623 | |
| 33 | I | H | 0.0000 | |
| 34 | G | H | 0.0000 | |
| 35 | D | H | -1.3840 | |
| 36 | Y | H | -0.2413 | |
| 37 | M | H | 0.0000 | |
| 38 | H | H | 0.0000 | |
| 39 | W | H | 0.0000 | |
| 40 | V | H | 0.0000 | |
| 41 | R | H | 0.0000 | |
| 42 | Q | H | -0.6911 | |
| 43 | A | H | -1.1466 | |
| 44 | P | H | -1.0318 | |
| 45 | G | H | -1.4816 | |
| 46 | K | H | -2.3444 | |
| 47 | G | H | -1.6011 | |
| 48 | L | H | 0.0000 | |
| 49 | E | H | -0.8160 | |
| 50 | W | H | 0.0000 | |
| 51 | V | H | 0.0000 | |
| 52 | G | H | 0.0000 | |
| 53 | L | H | 0.0000 | |
| 54 | I | H | -0.8869 | |
| 55 | K | H | -2.3909 | |
| 56 | E | H | -2.4966 | |
| 57 | T | H | -1.3777 | |
| 58 | I | H | -0.6692 | |
| 59 | Y | H | -0.9877 | |
| 60 | D | H | -1.5578 | |
| 61 | P | H | -2.1558 | |
| 62 | K | H | -2.5919 | |
| 63 | F | H | 0.0000 | |
| 64 | Q | H | -2.7030 | |
| 65 | D | H | -2.9473 | |
| 66 | R | H | -2.0719 | |
| 67 | A | H | 0.0000 | |
| 68 | T | H | -0.9682 | |
| 69 | I | H | 0.0000 | |
| 70 | S | H | -0.5938 | |
| 71 | A | H | -1.0213 | |
| 72 | D | H | -1.6694 | |
| 73 | N | H | -2.0657 | |
| 74 | S | H | -1.6276 | |
| 75 | K | H | -2.3236 | |
| 76 | N | H | -1.8986 | |
| 77 | T | H | -0.9895 | |
| 78 | A | H | 0.0000 | |
| 79 | Y | H | 0.0000 | |
| 80 | L | H | 0.0000 | |
| 81 | Q | H | -1.2593 | |
| 82 | M | H | 0.0000 | |
| 83 | N | H | -1.7892 | |
| 84 | S | H | -1.5785 | |
| 85 | L | H | 0.0000 | |
| 86 | R | H | -2.8066 | |
| 87 | A | H | -1.9576 | |
| 88 | E | H | -2.3887 | |
| 89 | D | H | 0.0000 | |
| 90 | T | H | -0.8281 | |
| 91 | A | H | 0.0000 | |
| 92 | V | H | 0.1544 | |
| 93 | Y | H | 0.0000 | |
| 94 | Y | H | 0.0000 | |
| 95 | C | H | 0.0000 | |
| 96 | A | H | 0.0000 | |
| 97 | R | H | 0.1265 | |
| 98 | F | H | 0.0000 | |
| 99 | F | H | 0.5351 | |
| 100 | V | H | 0.3269 | |
| 101 | R | H | -2.0784 | |
| 102 | D | H | -2.6375 | |
| 103 | G | H | -1.6564 | |
| 104 | K | H | -1.6433 | |
| 105 | P | H | -0.4023 | |
| 106 | V | H | 0.0523 | |
| 107 | A | H | 0.0000 | |
| 108 | I | H | -0.0108 | |
| 109 | W | H | -0.1706 | |
| 110 | G | H | 0.0000 | |
| 111 | Q | H | -1.2598 | |
| 112 | G | H | 0.0000 | |
| 113 | T | H | -0.0026 | |
| 114 | L | H | 0.0543 | |
| 115 | V | H | 0.0000 | |
| 116 | T | H | -0.5504 | |
| 117 | V | H | 0.0000 | |
| 118 | S | H | -1.0593 | |
| 119 | S | H | -0.7195 | |
| 120 | A | H | -0.4730 | |
| 121 | S | H | -0.5783 | |
| 122 | T | H | -0.7598 | |
| 123 | K | H | -1.2380 | |
| 124 | G | H | -1.3612 | |
| 125 | P | H | 0.0000 | |
| 126 | S | H | -0.4087 | |
| 127 | V | H | 0.0000 | |
| 128 | F | H | 0.0000 | |
| 129 | P | H | -1.0579 | |
| 130 | L | H | 0.0000 | |
| 131 | A | H | -1.1559 | |
| 132 | P | H | 0.0000 | |
| 133 | S | H | -0.9524 | |
| 134 | S | H | -0.6409 | |
| 135 | K | H | -1.1734 | |
| 136 | S | H | 0.0000 | |
| 137 | T | H | -0.7456 | |
| 138 | S | H | -0.7921 | |
| 139 | G | H | -0.8387 | |
| 140 | G | H | -0.8936 | |
| 141 | T | H | -0.5988 | |
| 142 | A | H | 0.0000 | |
| 143 | A | H | 0.0000 | |
| 144 | L | H | 0.0000 | |
| 145 | G | H | 0.0000 | |
| 146 | C | H | 0.0000 | |
| 147 | L | H | 0.0000 | |
| 148 | V | H | 0.0000 | |
| 149 | K | H | 0.0000 | |
| 150 | D | H | -0.3891 | |
| 151 | Y | H | 0.0000 | |
| 152 | F | H | 0.0000 | |
| 153 | P | H | 0.0000 | |
| 154 | E | H | -0.5452 | |
| 155 | P | H | -0.6811 | |
| 156 | V | H | -0.7632 | |
| 157 | T | H | -0.6855 | |
| 158 | V | H | -0.4713 | |
| 159 | S | H | -0.4468 | |
| 160 | W | H | 0.0000 | |
| 161 | N | H | -0.8371 | |
| 162 | S | H | -0.6894 | |
| 163 | G | H | -0.5165 | |
| 164 | A | H | -0.2684 | |
| 165 | L | H | -0.0000 | |
| 166 | T | H | -0.1750 | |
| 167 | S | H | -0.1641 | |
| 168 | G | H | -0.1844 | |
| 169 | V | H | 0.1480 | |
| 170 | H | H | -0.2000 | |
| 171 | T | H | -0.0845 | |
| 172 | F | H | 0.0000 | |
| 173 | P | H | -0.0788 | |
| 174 | A | H | 0.3267 | |
| 175 | V | H | 0.6582 | |
| 176 | L | H | 1.1350 | |
| 177 | Q | H | 0.2792 | |
| 178 | S | H | -0.1015 | |
| 179 | S | H | -0.2181 | |
| 180 | G | H | 0.0374 | |
| 181 | L | H | 0.1235 | |
| 182 | Y | H | 0.4655 | |
| 183 | S | H | 0.0000 | |
| 184 | L | H | 0.0000 | |
| 185 | S | H | 0.0000 | |
| 186 | S | H | 0.0000 | |
| 187 | V | H | 0.0000 | |
| 188 | V | H | 0.0000 | |
| 189 | T | H | -0.1173 | |
| 190 | V | H | 0.0000 | |
| 191 | P | H | -0.5027 | |
| 192 | S | H | -0.5424 | |
| 193 | S | H | -0.5686 | |
| 194 | S | H | 0.0000 | |
| 195 | L | H | -0.7158 | |
| 196 | G | H | -1.0701 | |
| 197 | T | H | -0.8583 | |
| 198 | Q | H | -1.4558 | |
| 199 | T | H | -1.2154 | |
| 200 | Y | H | 0.0000 | |
| 201 | I | H | -1.1787 | |
| 202 | C | H | 0.0000 | |
| 203 | N | H | -1.5089 | |
| 204 | V | H | 0.0000 | |
| 205 | N | H | -2.1891 | |
| 206 | H | H | 0.0000 | |
| 207 | K | H | -2.8099 | |
| 208 | P | H | -1.6280 | |
| 209 | S | H | -1.8262 | |
| 210 | N | H | -2.6170 | |
| 211 | T | H | -2.1261 | |
| 212 | K | H | -2.7934 | |
| 213 | V | H | -1.6331 | |
| 214 | D | H | -2.4214 | |
| 215 | K | H | -2.0977 | |
| 216 | K | H | -2.3594 | |
| 217 | V | H | 0.0000 | |
| 218 | E | H | -2.6576 | |
| 219 | P | H | -1.7636 | |
| 220 | K | H | -2.4337 | |
| 221 | S | H | -1.7039 | |
| 222 | C | H | -1.4944 | |
| 223 | D | H | -2.7307 | |
| 224 | K | H | -2.7218 | |
| 225 | T | H | -1.9527 | |
| 226 | H | H | -1.8965 | |
| 227 | T | H | -0.9578 | |
| 1 | D | L | -2.0573 | |
| 2 | I | L | -1.3148 | |
| 3 | Q | L | -1.8713 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.8871 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.6582 | |
| 8 | P | L | -0.6441 | |
| 9 | S | L | -0.8693 | |
| 10 | S | L | -0.7808 | |
| 11 | L | L | -0.5672 | |
| 12 | S | L | -0.8448 | |
| 13 | A | L | -1.1229 | |
| 14 | S | L | -1.0960 | |
| 15 | V | L | -0.4852 | |
| 16 | G | L | -1.0461 | |
| 17 | D | L | -2.1415 | |
| 18 | R | L | -2.4798 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6618 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.5731 | |
| 23 | C | L | 0.0000 | |
| 24 | S | L | -1.2111 | |
| 25 | T | L | 0.0000 | |
| 26 | A | L | -1.2510 | |
| 27 | Q | L | -1.8369 | |
| 28 | P | L | -1.2644 | |
| 29 | P | L | -0.7909 | |
| 30 | S | L | -0.7858 | |
| 31 | G | L | -0.6756 | |
| 32 | W | L | -0.3098 | |
| 33 | T | L | -0.1755 | |
| 34 | M | L | 0.0000 | |
| 35 | S | L | 0.0000 | |
| 36 | W | L | 0.0000 | |
| 37 | Y | L | 0.0000 | |
| 38 | Q | L | 0.0000 | |
| 39 | Q | L | 0.0000 | |
| 40 | K | L | -1.7464 | |
| 41 | P | L | -1.3672 | |
| 42 | G | L | -1.5934 | |
| 43 | K | L | -2.5841 | |
| 44 | A | L | -1.6959 | |
| 45 | P | L | 0.0000 | |
| 46 | K | L | -1.6592 | |
| 47 | V | L | -0.5349 | |
| 48 | L | L | 0.0000 | |
| 49 | I | L | 0.0000 | |
| 50 | Y | L | 0.0000 | |
| 51 | G | L | 0.0000 | |
| 52 | P | L | 0.0583 | |
| 53 | F | L | 0.9322 | |
| 54 | R | L | -0.8887 | |
| 55 | K | L | -0.9145 | |
| 56 | P | L | 0.0000 | |
| 57 | P | L | -0.8235 | |
| 58 | G | L | -0.7116 | |
| 59 | V | L | 0.0000 | |
| 60 | P | L | -0.5283 | |
| 61 | S | L | -0.6013 | |
| 62 | R | L | -0.7722 | |
| 63 | F | L | 0.0000 | |
| 64 | S | L | -0.2326 | |
| 65 | G | L | 0.1115 | |
| 66 | S | L | -0.2423 | |
| 67 | G | L | -0.6899 | |
| 68 | S | L | -0.8353 | |
| 69 | G | L | -1.2215 | |
| 70 | T | L | -1.4411 | |
| 71 | D | L | -2.0546 | |
| 72 | Y | L | 0.0000 | |
| 73 | T | L | -0.4234 | |
| 74 | L | L | 0.0000 | |
| 75 | T | L | -0.5990 | |
| 76 | I | L | 0.0000 | |
| 77 | S | L | -1.3212 | |
| 78 | S | L | -1.2818 | |
| 79 | L | L | 0.0000 | |
| 80 | Q | L | -1.2401 | |
| 81 | P | L | -1.6001 | |
| 82 | E | L | -1.9195 | |
| 83 | D | L | 0.0000 | |
| 84 | F | L | 0.0000 | |
| 85 | A | L | 0.0000 | |
| 86 | T | L | -0.7926 | |
| 87 | Y | L | 0.0000 | |
| 88 | Y | L | 0.0000 | |
| 89 | C | L | 0.0000 | |
| 90 | A | L | 0.0000 | |
| 91 | L | L | 0.0000 | |
| 92 | I | L | 0.0860 | |
| 93 | K | L | -0.4262 | |
| 94 | P | L | -0.3902 | |
| 95 | Y | L | 0.4591 | |
| 96 | A | L | 0.0000 | |
| 97 | T | L | -0.5553 | |
| 98 | F | L | 0.0000 | |
| 99 | G | L | 0.0000 | |
| 100 | Q | L | -1.8876 | |
| 101 | G | L | 0.0000 | |
| 102 | T | L | 0.0000 | |
| 103 | K | L | -1.3884 | |
| 104 | V | L | 0.0000 | |
| 105 | E | L | -0.9929 | |
| 106 | I | L | 0.0000 | |
| 107 | K | L | -1.4416 | |
| 108 | R | L | -0.8207 | |
| 109 | T | L | -0.1243 | |
| 110 | V | L | 0.2100 | |
| 111 | A | L | -0.0880 | |
| 112 | A | L | -0.1459 | |
| 113 | P | L | 0.0000 | |
| 114 | S | L | -0.2509 | |
| 115 | V | L | 0.0000 | |
| 116 | F | L | 0.0000 | |
| 117 | I | L | 0.0000 | |
| 118 | F | L | 0.0000 | |
| 119 | P | L | -0.5711 | |
| 120 | P | L | 0.0000 | |
| 121 | S | L | 0.0000 | |
| 122 | D | L | -2.8199 | |
| 123 | E | L | -2.6286 | |
| 124 | Q | L | 0.0000 | |
| 125 | L | L | -2.0809 | |
| 126 | K | L | -2.6987 | |
| 127 | S | L | -1.6923 | |
| 128 | G | L | -1.2306 | |
| 129 | T | L | -0.9840 | |
| 130 | A | L | 0.0000 | |
| 131 | S | L | 0.0000 | |
| 132 | V | L | 0.0000 | |
| 133 | V | L | 0.0000 | |
| 134 | C | L | 0.0000 | |
| 135 | L | L | 0.0000 | |
| 136 | L | L | 0.0000 | |
| 137 | N | L | 0.0000 | |
| 138 | N | L | -0.7994 | |
| 139 | F | L | 0.0000 | |
| 140 | Y | L | 0.0000 | |
| 141 | P | L | -1.6821 | |
| 142 | R | L | -2.7599 | |
| 143 | E | L | -3.1706 | |
| 144 | A | L | -2.3029 | |
| 145 | K | L | -2.3883 | |
| 146 | V | L | -0.9554 | |
| 147 | Q | L | -0.4851 | |
| 148 | W | L | 0.0000 | |
| 149 | K | L | -0.4089 | |
| 150 | V | L | 0.0000 | |
| 151 | D | L | -1.7311 | |
| 152 | N | L | -1.4163 | |
| 153 | A | L | -0.2224 | |
| 154 | L | L | 0.7439 | |
| 155 | Q | L | -0.1896 | |
| 156 | S | L | -0.4006 | |
| 157 | G | L | -0.8685 | |
| 158 | N | L | -0.7682 | |
| 159 | S | L | -0.9590 | |
| 160 | Q | L | -1.1058 | |
| 161 | E | L | -1.2535 | |
| 162 | S | L | -0.4636 | |
| 163 | V | L | -0.0794 | |
| 164 | T | L | -0.6195 | |
| 165 | E | L | -1.4820 | |
| 166 | Q | L | 0.0000 | |
| 167 | D | L | -1.7261 | |
| 168 | S | L | -2.0869 | |
| 169 | K | L | -2.4991 | |
| 170 | D | L | -1.7407 | |
| 171 | S | L | 0.0000 | |
| 172 | T | L | 0.0000 | |
| 173 | Y | L | 0.0000 | |
| 174 | S | L | 0.0000 | |
| 175 | L | L | 0.0000 | |
| 176 | S | L | 0.0000 | |
| 177 | S | L | 0.0000 | |
| 178 | T | L | -0.5425 | |
| 179 | L | L | 0.0000 | |
| 180 | T | L | -0.3824 | |
| 181 | L | L | -0.5796 | |
| 182 | S | L | -1.1231 | |
| 183 | K | L | -1.9007 | |
| 184 | A | L | -1.7133 | |
| 185 | D | L | -2.2740 | |
| 186 | Y | L | 0.0000 | |
| 187 | E | L | -3.1818 | |
| 188 | K | L | -3.3611 | |
| 189 | H | L | -2.7287 | |
| 190 | K | L | -2.9706 | |
| 191 | V | L | -1.6309 | |
| 192 | Y | L | 0.0000 | |
| 193 | A | L | 0.0000 | |
| 194 | C | L | 0.0000 | |
| 195 | E | L | -0.5331 | |
| 196 | V | L | 0.0000 | |
| 197 | T | L | -1.1742 | |
| 198 | H | L | 0.0000 | |
| 199 | Q | L | -1.7766 | |
| 200 | G | L | -0.4832 | |
| 201 | L | L | -0.2641 | |
| 202 | S | L | -0.4617 | |
| 203 | S | L | -0.4222 | |
| 204 | P | L | -0.5261 | |
| 205 | V | L | 0.0608 | |
| 206 | T | L | -0.3742 | |
| 207 | K | L | -0.8190 | |
| 208 | S | L | -0.7600 | |
| 209 | F | L | 0.0000 | |
| 210 | N | L | -1.7983 | |
| 211 | R | L | -2.3821 | |
| 212 | G | L | -1.8577 | |
| 213 | E | L | -2.0715 | |
| 214 | C | L | -1.1616 |