| Chain sequence(s) |
A: ATGVRAVPGNENSLEIEELARFAVDEHNKKENALLEFVRVVKAKEQIDLTQPHDSTMYYLTLEAKDGGKKKLYEAKVWVKYEEDEYWRMNFKELQEFKPVGDA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:07)
[INFO] Main: Simulation completed successfully. (00:02:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.2125 | |
| 2 | T | A | 0.0772 | |
| 3 | G | A | -0.2626 | |
| 4 | V | A | -0.4657 | |
| 5 | R | A | -1.6964 | |
| 6 | A | A | -1.2575 | |
| 7 | V | A | -1.1646 | |
| 8 | P | A | -1.2750 | |
| 9 | G | A | -1.4190 | |
| 10 | N | A | -1.8608 | |
| 11 | E | A | -2.4226 | |
| 12 | N | A | -2.1937 | |
| 13 | S | A | -1.1025 | |
| 14 | L | A | -0.0932 | |
| 15 | E | A | -1.5750 | |
| 16 | I | A | 0.0000 | |
| 17 | E | A | -1.9833 | |
| 18 | E | A | -1.4737 | |
| 19 | L | A | 0.0000 | |
| 20 | A | A | 0.0000 | |
| 21 | R | A | -2.3505 | |
| 22 | F | A | -1.4818 | |
| 23 | A | A | 0.0000 | |
| 24 | V | A | 0.0000 | |
| 25 | D | A | -3.1617 | |
| 26 | E | A | -3.0455 | |
| 27 | H | A | 0.0000 | |
| 28 | N | A | -3.0807 | |
| 29 | K | A | -3.9849 | |
| 30 | K | A | -4.2282 | |
| 31 | E | A | -3.8599 | |
| 32 | N | A | -3.1732 | |
| 33 | A | A | -1.9335 | |
| 34 | L | A | -0.3733 | |
| 35 | L | A | 0.0000 | |
| 36 | E | A | -2.9002 | |
| 37 | F | A | -1.8557 | |
| 38 | V | A | -1.3571 | |
| 39 | R | A | -2.3470 | |
| 40 | V | A | 0.0000 | |
| 41 | V | A | -1.0255 | |
| 42 | K | A | -2.2963 | |
| 43 | A | A | -1.7787 | |
| 44 | K | A | -1.6104 | |
| 45 | E | A | -0.8654 | |
| 46 | Q | A | -0.3177 | |
| 47 | I | A | -0.2343 | |
| 48 | D | A | -0.2822 | |
| 49 | L | A | 0.5654 | |
| 50 | T | A | -0.2987 | |
| 51 | Q | A | -1.3565 | |
| 52 | P | A | -1.4613 | |
| 53 | H | A | -2.3128 | |
| 54 | D | A | -1.7981 | |
| 55 | S | A | 0.0000 | |
| 56 | T | A | 0.0000 | |
| 57 | M | A | -0.3753 | |
| 58 | Y | A | 0.0000 | |
| 59 | Y | A | -0.7560 | |
| 60 | L | A | 0.0000 | |
| 61 | T | A | -1.1301 | |
| 62 | L | A | 0.0000 | |
| 63 | E | A | -1.9187 | |
| 64 | A | A | 0.0000 | |
| 65 | K | A | -3.3700 | |
| 66 | D | A | -2.8200 | |
| 67 | G | A | -2.1362 | |
| 68 | G | A | -2.7818 | |
| 69 | K | A | -3.7827 | |
| 70 | K | A | -3.5916 | |
| 71 | K | A | -2.6932 | |
| 72 | L | A | -1.2225 | |
| 73 | Y | A | 0.0000 | |
| 74 | E | A | -1.1045 | |
| 75 | A | A | 0.0000 | |
| 76 | K | A | -1.1899 | |
| 77 | V | A | 0.0000 | |
| 78 | W | A | -0.4322 | |
| 79 | V | A | 0.0000 | |
| 80 | K | A | -1.1468 | |
| 81 | Y | A | -1.8799 | |
| 82 | E | A | -3.2119 | |
| 83 | E | A | -4.0031 | |
| 84 | D | A | -3.5144 | |
| 85 | E | A | -2.7982 | |
| 86 | Y | A | -0.2473 | |
| 87 | W | A | -0.1096 | |
| 88 | R | A | -1.7162 | |
| 89 | M | A | 0.1193 | |
| 90 | N | A | -0.6488 | |
| 91 | F | A | -0.2774 | |
| 92 | K | A | -1.0146 | |
| 93 | E | A | -1.5862 | |
| 94 | L | A | 0.0000 | |
| 95 | Q | A | -1.3750 | |
| 96 | E | A | -1.5392 | |
| 97 | F | A | -1.1546 | |
| 98 | K | A | -1.3042 | |
| 99 | P | A | -0.9331 | |
| 100 | V | A | -0.3391 | |
| 101 | G | A | -1.2212 | |
| 102 | D | A | -1.8430 | |
| 103 | A | A | -0.8355 |