| Chain sequence(s) |
H: EVQLQQSGPELVKPGASVKMSCKASGYTFTSYVMHWLKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCARGSGFVYWGQGTLVTVSS
L: DVQMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYASYPYTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:03)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:33)
[INFO] Main: Simulation completed successfully. (00:03:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.1620 | |
| 2 | V | H | -1.2805 | |
| 3 | Q | H | -2.1428 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -2.1368 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.9368 | |
| 8 | G | H | -0.6198 | |
| 9 | P | H | 0.1580 | |
| 11 | E | H | 0.3271 | |
| 12 | L | H | 1.1320 | |
| 13 | V | H | -0.1443 | |
| 14 | K | H | -1.6297 | |
| 15 | P | H | -1.3284 | |
| 16 | G | H | -1.1091 | |
| 17 | A | H | -0.8861 | |
| 18 | S | H | -1.1391 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -1.8442 | |
| 21 | M | H | 0.0000 | |
| 22 | S | H | -0.8645 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -1.5141 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.3664 | |
| 27 | G | H | -1.2526 | |
| 28 | Y | H | -0.4749 | |
| 29 | T | H | -0.0541 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -0.0102 | |
| 36 | S | H | 0.3804 | |
| 37 | Y | H | 0.7229 | |
| 38 | V | H | 0.3572 | |
| 39 | M | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | L | H | 0.0000 | |
| 43 | K | H | -0.7766 | |
| 44 | Q | H | -1.4042 | |
| 45 | K | H | -2.6084 | |
| 46 | P | H | -1.6939 | |
| 47 | G | H | -1.6550 | |
| 48 | Q | H | -2.3254 | |
| 49 | G | H | -1.5458 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.1199 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | Y | H | -0.2099 | |
| 56 | I | H | 0.0000 | |
| 57 | N | H | -0.4794 | |
| 58 | P | H | 0.0000 | |
| 59 | Y | H | 0.2465 | |
| 62 | N | H | -1.1979 | |
| 63 | D | H | -1.5993 | |
| 64 | G | H | -1.0948 | |
| 65 | T | H | -0.9434 | |
| 66 | K | H | -1.3395 | |
| 67 | Y | H | -1.3922 | |
| 68 | N | H | 0.0000 | |
| 69 | E | H | -3.4717 | |
| 70 | K | H | -3.1809 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -3.1584 | |
| 74 | G | H | -1.9214 | |
| 75 | K | H | -1.7508 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -1.0273 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | -0.7183 | |
| 80 | S | H | -0.9127 | |
| 81 | D | H | -1.3186 | |
| 82 | K | H | -1.4116 | |
| 83 | S | H | -0.9625 | |
| 84 | S | H | -0.8422 | |
| 85 | S | H | -0.9521 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.5781 | |
| 89 | M | H | 0.0000 | |
| 90 | E | H | -1.5923 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -0.9841 | |
| 93 | S | H | -0.8602 | |
| 94 | L | H | 0.0000 | |
| 95 | T | H | -1.2538 | |
| 96 | S | H | -1.4538 | |
| 97 | E | H | -2.2153 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | -0.7492 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | -0.0431 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.2227 | |
| 107 | G | H | 0.0000 | |
| 108 | S | H | 0.2072 | |
| 114 | G | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | V | H | 0.5105 | |
| 117 | Y | H | 0.3054 | |
| 118 | W | H | -0.3374 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.6942 | |
| 121 | G | H | -0.6022 | |
| 122 | T | H | 0.0000 | |
| 123 | L | H | 0.7576 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.1850 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5087 | |
| 128 | S | H | -0.7424 | |
| 1 | D | L | -2.3741 | |
| 2 | V | L | 0.0000 | |
| 3 | Q | L | -2.2478 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.3107 | |
| 6 | Q | L | -1.0428 | |
| 7 | S | L | -0.7111 | |
| 8 | P | L | -0.5408 | |
| 9 | S | L | -0.7709 | |
| 10 | S | L | -0.9348 | |
| 11 | L | L | -0.4509 | |
| 12 | S | L | -0.6057 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.4509 | |
| 15 | L | L | 0.4778 | |
| 16 | G | L | -0.9992 | |
| 17 | E | L | -1.9758 | |
| 18 | R | L | -2.4688 | |
| 19 | V | L | 0.0000 | |
| 20 | S | L | -0.6109 | |
| 21 | L | L | 0.0000 | |
| 22 | T | L | -0.8711 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.8521 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -2.2818 | |
| 27 | Q | L | -2.9133 | |
| 28 | E | L | -2.6546 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -0.6889 | |
| 37 | G | L | 0.0466 | |
| 38 | Y | L | 1.0681 | |
| 39 | L | L | 0.0000 | |
| 40 | S | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | L | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.6175 | |
| 46 | P | L | -1.4216 | |
| 47 | D | L | -2.2769 | |
| 48 | G | L | -1.5525 | |
| 49 | T | L | -1.3214 | |
| 50 | I | L | 0.0000 | |
| 51 | K | L | -0.6637 | |
| 52 | R | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.7159 | |
| 56 | A | L | 0.6048 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.2285 | |
| 66 | T | L | 0.0349 | |
| 67 | L | L | -0.2133 | |
| 68 | D | L | -0.4716 | |
| 69 | S | L | -0.4971 | |
| 70 | G | L | -0.8347 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -1.1770 | |
| 74 | K | L | -1.9911 | |
| 75 | R | L | -1.5767 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.7571 | |
| 78 | G | L | -0.4612 | |
| 79 | S | L | -0.9560 | |
| 80 | R | L | -1.7131 | |
| 83 | S | L | -1.3106 | |
| 84 | G | L | -1.4388 | |
| 85 | S | L | -1.9505 | |
| 86 | D | L | -1.6953 | |
| 87 | Y | L | 0.0000 | |
| 88 | S | L | -0.8670 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6870 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.7969 | |
| 93 | S | L | -1.3305 | |
| 94 | L | L | 0.0000 | |
| 95 | E | L | -1.1037 | |
| 96 | S | L | -0.9657 | |
| 97 | E | L | -2.1832 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.7036 | |
| 100 | A | L | 0.0000 | |
| 101 | D | L | -1.1605 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | L | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.7175 | |
| 108 | A | L | 0.1397 | |
| 109 | S | L | -0.2961 | |
| 114 | Y | L | -0.1623 | |
| 115 | P | L | -0.7907 | |
| 116 | Y | L | -0.0858 | |
| 117 | T | L | -0.5034 | |
| 118 | F | L | -0.2538 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.1272 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.6834 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.0955 | |
| 126 | I | L | 0.7297 | |
| 127 | K | L | -0.7924 |