Project name: 2510-1

Status: done

Started: 2026-03-11 08:39:26
Settings
Chain sequence(s) H: EVQLQQSGPELVKPGASVKMSCKASGYTFTSYVMHWLKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCARGSGFVYWGQGTLVTVSS
L: DVQMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYASYPYTFGGGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:03)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:33)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:35)
Show buried residues

Minimal score value
-3.4717
Maximal score value
1.132
Average score
-0.6439
Total score value
-142.9497

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.1620
2 V H -1.2805
3 Q H -2.1428
4 L H 0.0000
5 Q H -2.1368
6 Q H 0.0000
7 S H -0.9368
8 G H -0.6198
9 P H 0.1580
11 E H 0.3271
12 L H 1.1320
13 V H -0.1443
14 K H -1.6297
15 P H -1.3284
16 G H -1.1091
17 A H -0.8861
18 S H -1.1391
19 V H 0.0000
20 K H -1.8442
21 M H 0.0000
22 S H -0.8645
23 C H 0.0000
24 K H -1.5141
25 A H 0.0000
26 S H -1.3664
27 G H -1.2526
28 Y H -0.4749
29 T H -0.0541
30 F H 0.0000
35 T H -0.0102
36 S H 0.3804
37 Y H 0.7229
38 V H 0.3572
39 M H 0.0000
40 H H 0.0000
41 W H 0.0000
42 L H 0.0000
43 K H -0.7766
44 Q H -1.4042
45 K H -2.6084
46 P H -1.6939
47 G H -1.6550
48 Q H -2.3254
49 G H -1.5458
50 L H 0.0000
51 E H -1.1199
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 Y H -0.2099
56 I H 0.0000
57 N H -0.4794
58 P H 0.0000
59 Y H 0.2465
62 N H -1.1979
63 D H -1.5993
64 G H -1.0948
65 T H -0.9434
66 K H -1.3395
67 Y H -1.3922
68 N H 0.0000
69 E H -3.4717
70 K H -3.1809
71 F H 0.0000
72 K H -3.1584
74 G H -1.9214
75 K H -1.7508
76 A H 0.0000
77 T H -1.0273
78 L H 0.0000
79 T H -0.7183
80 S H -0.9127
81 D H -1.3186
82 K H -1.4116
83 S H -0.9625
84 S H -0.8422
85 S H -0.9521
86 T H 0.0000
87 A H 0.0000
88 Y H -0.5781
89 M H 0.0000
90 E H -1.5923
91 L H 0.0000
92 S H -0.9841
93 S H -0.8602
94 L H 0.0000
95 T H -1.2538
96 S H -1.4538
97 E H -2.2153
98 D H 0.0000
99 S H -0.7492
100 A H 0.0000
101 V H -0.0431
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.2227
107 G H 0.0000
108 S H 0.2072
114 G H 0.0000
115 F H 0.0000
116 V H 0.5105
117 Y H 0.3054
118 W H -0.3374
119 G H 0.0000
120 Q H -1.6942
121 G H -0.6022
122 T H 0.0000
123 L H 0.7576
124 V H 0.0000
125 T H 0.1850
126 V H 0.0000
127 S H -0.5087
128 S H -0.7424
1 D L -2.3741
2 V L 0.0000
3 Q L -2.2478
4 M L 0.0000
5 T L -1.3107
6 Q L -1.0428
7 S L -0.7111
8 P L -0.5408
9 S L -0.7709
10 S L -0.9348
11 L L -0.4509
12 S L -0.6057
13 A L 0.0000
14 S L -0.4509
15 L L 0.4778
16 G L -0.9992
17 E L -1.9758
18 R L -2.4688
19 V L 0.0000
20 S L -0.6109
21 L L 0.0000
22 T L -0.8711
23 C L 0.0000
24 R L -2.8521
25 A L 0.0000
26 S L -2.2818
27 Q L -2.9133
28 E L -2.6546
29 I L 0.0000
36 S L -0.6889
37 G L 0.0466
38 Y L 1.0681
39 L L 0.0000
40 S L 0.0000
41 W L 0.0000
42 L L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 K L -1.6175
46 P L -1.4216
47 D L -2.2769
48 G L -1.5525
49 T L -1.3214
50 I L 0.0000
51 K L -0.6637
52 R L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.7159
56 A L 0.6048
57 A L 0.0000
65 S L -0.2285
66 T L 0.0349
67 L L -0.2133
68 D L -0.4716
69 S L -0.4971
70 G L -0.8347
71 V L 0.0000
72 P L -1.1770
74 K L -1.9911
75 R L -1.5767
76 F L 0.0000
77 S L -0.7571
78 G L -0.4612
79 S L -0.9560
80 R L -1.7131
83 S L -1.3106
84 G L -1.4388
85 S L -1.9505
86 D L -1.6953
87 Y L 0.0000
88 S L -0.8670
89 L L 0.0000
90 T L -0.6870
91 I L 0.0000
92 S L -1.7969
93 S L -1.3305
94 L L 0.0000
95 E L -1.1037
96 S L -0.9657
97 E L -2.1832
98 D L 0.0000
99 F L -0.7036
100 A L 0.0000
101 D L -1.1605
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 L L 0.0000
106 Q L 0.0000
107 Y L 0.7175
108 A L 0.1397
109 S L -0.2961
114 Y L -0.1623
115 P L -0.7907
116 Y L -0.0858
117 T L -0.5034
118 F L -0.2538
119 G L 0.0000
120 G L -1.1272
121 G L 0.0000
122 T L 0.0000
123 K L -1.6834
124 L L 0.0000
125 E L -1.0955
126 I L 0.7297
127 K L -0.7924
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Laboratory of Theory of Biopolymers 2018