| Chain sequence(s) |
X: KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
input PDB |
| Selected Chain(s) | X |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with X chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:57)
[INFO] Main: Simulation completed successfully. (00:00:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | X | -1.3817 | |
| 2 | V | X | 0.5101 | |
| 3 | F | X | -0.5121 | |
| 4 | G | X | -0.7872 | |
| 5 | R | X | -1.5296 | |
| 6 | C | X | -1.4876 | |
| 7 | E | X | -2.0276 | |
| 8 | L | X | 0.0000 | |
| 9 | A | X | 0.0000 | |
| 10 | A | X | -2.1523 | |
| 11 | A | X | -2.2224 | |
| 12 | M | X | 0.0000 | |
| 13 | K | X | -3.4671 | |
| 14 | R | X | -3.2644 | |
| 15 | H | X | -2.5384 | |
| 16 | G | X | -2.0436 | |
| 17 | L | X | 0.0000 | |
| 18 | D | X | -2.2799 | |
| 19 | N | X | -2.1227 | |
| 20 | Y | X | -1.4184 | |
| 21 | R | X | -2.2235 | |
| 22 | G | X | -1.7026 | |
| 23 | Y | X | -1.3026 | |
| 24 | S | X | 0.0000 | |
| 25 | L | X | 0.0000 | |
| 26 | G | X | 0.0000 | |
| 27 | N | X | 0.0000 | |
| 28 | W | X | 0.0000 | |
| 29 | V | X | 0.0000 | |
| 30 | C | X | 0.0000 | |
| 31 | A | X | 0.0000 | |
| 32 | A | X | 0.0000 | |
| 33 | K | X | -1.3853 | |
| 34 | F | X | -0.5736 | |
| 35 | E | X | -0.7457 | |
| 36 | S | X | -1.3346 | |
| 37 | N | X | -1.4942 | |
| 38 | F | X | 0.0000 | |
| 39 | N | X | -1.3808 | |
| 40 | T | X | 0.0000 | |
| 41 | Q | X | -1.7590 | |
| 42 | A | X | -1.1816 | |
| 43 | T | X | -1.2490 | |
| 44 | N | X | -2.0026 | |
| 45 | R | X | -3.0932 | |
| 46 | N | X | -2.7194 | |
| 47 | T | X | -2.2805 | |
| 48 | D | X | -2.6650 | |
| 49 | G | X | -2.1929 | |
| 50 | S | X | 0.0000 | |
| 51 | T | X | -1.3978 | |
| 52 | D | X | 0.0000 | |
| 53 | Y | X | 0.0000 | |
| 54 | G | X | 0.0000 | |
| 55 | I | X | 0.0000 | |
| 56 | L | X | 0.0000 | |
| 57 | Q | X | 0.0000 | |
| 58 | I | X | 0.0000 | |
| 59 | N | X | 0.0000 | |
| 60 | S | X | 0.0000 | |
| 61 | R | X | -1.6264 | |
| 62 | W | X | -0.4489 | |
| 63 | W | X | 0.0000 | |
| 64 | C | X | 0.0000 | |
| 65 | N | X | -1.9697 | |
| 66 | D | X | -1.9539 | |
| 67 | G | X | -1.8697 | |
| 68 | R | X | -2.4730 | |
| 69 | T | X | 0.0000 | |
| 70 | P | X | -1.6569 | |
| 71 | G | X | -1.5241 | |
| 72 | S | X | 0.0000 | |
| 73 | R | X | -2.1083 | |
| 74 | N | X | -1.1931 | |
| 75 | L | X | 0.1899 | |
| 76 | C | X | 0.0000 | |
| 77 | N | X | -1.2983 | |
| 78 | I | X | -0.7927 | |
| 79 | P | X | -0.9558 | |
| 80 | C | X | 0.0000 | |
| 81 | S | X | -0.6387 | |
| 82 | A | X | -0.4438 | |
| 83 | L | X | 0.0000 | |
| 84 | L | X | 0.0000 | |
| 85 | S | X | -1.1938 | |
| 86 | S | X | -1.0158 | |
| 87 | D | X | -2.2006 | |
| 88 | I | X | 0.0000 | |
| 89 | T | X | -1.0926 | |
| 90 | A | X | -0.8322 | |
| 91 | S | X | 0.0000 | |
| 92 | V | X | 0.0000 | |
| 93 | N | X | -1.8341 | |
| 94 | C | X | 0.0000 | |
| 95 | A | X | 0.0000 | |
| 96 | K | X | -1.8015 | |
| 97 | K | X | -2.1896 | |
| 98 | I | X | 0.0000 | |
| 99 | V | X | 0.0000 | |
| 100 | S | X | -2.1325 | |
| 101 | D | X | -2.7109 | |
| 102 | G | X | -1.9244 | |
| 103 | N | X | -2.0404 | |
| 104 | G | X | -1.2771 | |
| 105 | M | X | -0.3693 | |
| 106 | N | X | -0.4590 | |
| 107 | A | X | 0.0000 | |
| 108 | W | X | 0.0000 | |
| 109 | V | X | -0.0080 | |
| 110 | A | X | 0.0000 | |
| 111 | W | X | 0.0000 | |
| 112 | R | X | -2.2154 | |
| 113 | N | X | -2.8095 | |
| 114 | R | X | -3.0367 | |
| 115 | C | X | 0.0000 | |
| 116 | K | X | -3.0813 | |
| 117 | G | X | -1.3628 | |
| 118 | T | X | -0.8416 | |
| 119 | D | X | 0.0000 | |
| 120 | V | X | 0.9043 | |
| 121 | Q | X | -0.8269 | |
| 122 | A | X | -0.7412 | |
| 123 | W | X | -0.4598 | |
| 124 | I | X | 0.0000 | |
| 125 | R | X | -2.2293 | |
| 126 | G | X | -1.7210 | |
| 127 | C | X | -1.6282 | |
| 128 | R | X | -2.0053 |