| Chain sequence(s) |
A: IKVRIRKPKRPIPKTDDELYSWDEYWKKQREIRAERGAARSARLN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:25)
[INFO] Main: Simulation completed successfully. (00:01:25)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 1.3531 | |
| 2 | K | A | -0.0783 | |
| 3 | V | A | 0.7722 | |
| 4 | R | A | -0.9593 | |
| 5 | I | A | -0.0244 | |
| 6 | R | A | -2.2800 | |
| 7 | K | A | -3.1111 | |
| 8 | P | A | -2.5073 | |
| 9 | K | A | -3.2081 | |
| 10 | R | A | -2.6648 | |
| 11 | P | A | -0.8054 | |
| 12 | I | A | 0.8460 | |
| 13 | P | A | -0.0032 | |
| 14 | K | A | -1.2843 | |
| 15 | T | A | -1.8818 | |
| 16 | D | A | -3.0206 | |
| 17 | D | A | -3.3094 | |
| 18 | E | A | -2.5812 | |
| 19 | L | A | 0.1135 | |
| 20 | Y | A | -0.1219 | |
| 21 | S | A | -0.8362 | |
| 22 | W | A | -1.1959 | |
| 23 | D | A | -2.7914 | |
| 24 | E | A | -3.0989 | |
| 25 | Y | A | -1.9267 | |
| 26 | W | A | -2.3674 | |
| 27 | K | A | -4.1837 | |
| 28 | K | A | -4.3268 | |
| 29 | Q | A | -3.8324 | |
| 30 | R | A | -4.6429 | |
| 31 | E | A | -4.7626 | |
| 32 | I | A | -3.6638 | |
| 33 | R | A | -4.4640 | |
| 34 | A | A | -3.8159 | |
| 35 | E | A | -4.2676 | |
| 36 | R | A | -4.3316 | |
| 37 | G | A | -3.0828 | |
| 38 | A | A | -2.4692 | |
| 39 | A | A | -2.6203 | |
| 40 | R | A | -3.0562 | |
| 41 | S | A | -1.9115 | |
| 42 | A | A | -1.4987 | |
| 43 | R | A | -2.0028 | |
| 44 | L | A | -0.3798 | |
| 45 | N | A | -0.9949 |