Chain sequence(s) |
C: EVQLVESGGGLVQPGGSLRLSCAASDFTFRSYEMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAIYYCARLRDGFNKGFDYWGQGTLVTVSS
input PDB |
Selected Chain(s) | C |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | QK3C,VF2C,VQ5C,VN118C |
Energy difference between WT (input) and mutated protein (by FoldX) | 8.90221 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:24) [INFO] FoldX: Starting FoldX energy minimalization (00:00:56) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:27) [INFO] Main: Simulation completed successfully. (00:01:27) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | E | C | -2.0629 | |
2 | F | C | -1.0461 | mutated: VF2C |
3 | K | C | -2.1814 | mutated: QK3C |
4 | L | C | 0.0000 | |
5 | Q | C | -1.5593 | mutated: VQ5C |
6 | E | C | 0.0000 | |
7 | S | C | -0.8084 | |
8 | G | C | -0.7773 | |
9 | G | C | 0.0366 | |
10 | G | C | 0.9241 | |
11 | L | C | 1.4404 | |
12 | V | C | -0.0388 | |
13 | Q | C | -1.3376 | |
14 | P | C | -1.4898 | |
15 | G | C | -1.4140 | |
16 | G | C | -0.9789 | |
17 | S | C | -1.2311 | |
18 | L | C | -0.9630 | |
19 | R | C | -2.1458 | |
20 | L | C | 0.0000 | |
21 | S | C | -0.8223 | |
22 | C | C | 0.0000 | |
23 | A | C | -0.9849 | |
24 | A | C | 0.0000 | |
25 | S | C | -0.6127 | |
26 | D | C | 0.0000 | |
27 | F | C | 1.5639 | |
28 | T | C | 0.2622 | |
29 | F | C | 0.0000 | |
30 | R | C | -2.0386 | |
31 | S | C | -0.8965 | |
32 | Y | C | -1.2378 | |
33 | E | C | -1.1579 | |
34 | M | C | 0.0000 | |
35 | S | C | 0.0000 | |
36 | W | C | 0.0000 | |
37 | V | C | 0.0000 | |
38 | R | C | 0.0000 | |
39 | Q | C | -0.2955 | |
40 | A | C | -0.9843 | |
41 | P | C | -1.2937 | |
42 | G | C | -1.4348 | |
43 | K | C | -2.1350 | |
44 | G | C | -1.0592 | |
45 | L | C | 0.3948 | |
46 | E | C | -0.3909 | |
47 | W | C | 0.3405 | |
48 | V | C | 0.0000 | |
49 | S | C | 0.0000 | |
50 | A | C | 0.0000 | |
51 | I | C | 0.0000 | |
52 | S | C | -0.5883 | |
53 | G | C | -1.2524 | |
54 | S | C | -1.2315 | |
55 | G | C | -1.0817 | |
56 | G | C | -0.7342 | |
57 | S | C | -0.3022 | |
58 | T | C | 0.1989 | |
59 | Y | C | 0.6075 | |
60 | Y | C | -0.3559 | |
61 | A | C | -1.1386 | |
62 | D | C | -2.3443 | |
63 | S | C | -1.7150 | |
64 | V | C | 0.0000 | |
65 | K | C | -2.3847 | |
66 | G | C | -1.6175 | |
67 | R | C | 0.0000 | |
68 | F | C | 0.0000 | |
69 | T | C | -0.6722 | |
70 | I | C | 0.0000 | |
71 | S | C | -0.5624 | |
72 | R | C | -1.3626 | |
73 | D | C | -1.9805 | |
74 | N | C | -2.1899 | |
75 | S | C | -1.7905 | |
76 | K | C | -2.3168 | |
77 | N | C | -1.6498 | |
78 | T | C | 0.0000 | |
79 | L | C | 0.0000 | |
80 | Y | C | -0.6488 | |
81 | L | C | 0.0000 | |
82 | Q | C | -1.2337 | |
83 | M | C | 0.0000 | |
84 | N | C | -1.3328 | |
85 | S | C | -1.2325 | |
86 | L | C | 0.0000 | |
87 | R | C | -2.4725 | |
88 | A | C | -1.8896 | |
89 | E | C | -2.3444 | |
90 | D | C | 0.0000 | |
91 | T | C | -0.4216 | |
92 | A | C | 0.0000 | |
93 | I | C | 1.0796 | |
94 | Y | C | 0.0000 | |
95 | Y | C | 0.4095 | |
96 | C | C | 0.0000 | |
97 | A | C | 0.0000 | |
98 | R | C | 0.0000 | |
99 | L | C | 0.0000 | |
100 | R | C | -3.2066 | |
101 | D | C | -3.3402 | |
102 | G | C | -2.0912 | |
103 | F | C | -1.2339 | |
104 | N | C | -2.4298 | |
105 | K | C | -3.1876 | |
106 | G | C | -1.9154 | |
107 | F | C | -1.0044 | |
108 | D | C | -1.1189 | |
109 | Y | C | -0.3207 | |
110 | W | C | 0.2048 | |
111 | G | C | -0.8064 | |
112 | Q | C | -1.4418 | |
113 | G | C | -0.2263 | |
114 | T | C | 0.3491 | |
115 | L | C | 1.7871 | |
116 | V | C | 0.0000 | |
117 | T | C | 0.3367 | |
118 | N | C | 0.0000 | mutated: VN118C |
119 | S | C | -0.7752 | |
120 | S | C | -1.0605 |