| Chain sequence(s) |
A: KWCFRVCYRYICYRRCR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:21)
[INFO] Main: Simulation completed successfully. (00:00:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -1.4608 | |
| 2 | W | A | -0.1273 | |
| 3 | C | A | -0.7531 | |
| 4 | F | A | -0.8243 | |
| 5 | R | A | -1.8530 | |
| 6 | V | A | -0.0511 | |
| 7 | C | A | 1.4744 | |
| 8 | Y | A | 1.7296 | |
| 9 | R | A | 0.0042 | |
| 10 | Y | A | 1.5306 | |
| 11 | I | A | 2.2776 | |
| 12 | C | A | 1.3817 | |
| 13 | Y | A | 0.0249 | |
| 14 | R | A | -2.3929 | |
| 15 | R | A | -2.5978 | |
| 16 | C | A | -1.7554 | |
| 17 | R | A | -1.9246 |