Project name: e5e20bd3f471d7b

Status: done

Started: 2026-01-17 11:57:30
Settings
Chain sequence(s) H: QVQLVQSGGGVVKPGASLRRLACSASGFTFTDYYMSWIRQTPGKGLQWLAYITKDGSEKKYADSLQGRFAVSRDNANNLVFLQLNTVEDDDTGVYYCARDDGYYDRSGYYGVFDLWGQGIRVTVSSASTKGPSVFPLAPSGTAALGCLVKDYFPEPVVTVSWNSGALTSGVHTFPAVVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGRLV
L: LLTQSPDSLAVTLGETATITCRSSRNILHSLNNKNYLAWYQQRPGQAPKLLVIWASMRVSGVADRFSGSGSGTDFALTISSLQPEDAAVYYCQHYYTTHRTFGQGTRVEIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:07:18)
[INFO]       Main:     Simulation completed successfully.                                          (00:07:22)
Show buried residues

Minimal score value
-3.543
Maximal score value
1.8947
Average score
-0.7154
Total score value
-316.9006

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -0.9851
2 V H -0.0114
3 Q H -0.4373
4 L H 0.0000
5 V H 0.8026
6 Q H 0.0000
7 S H -0.5948
8 G H -1.0710
9 G H -0.8967
10 G H -0.3808
11 V H -0.0457
12 V H 0.0000
13 K H -2.2344
14 P H -2.0506
15 G H -1.6611
16 A H -1.1371
17 S H -1.2035
18 L H -1.2819
19 R H -2.2115
20 L H 0.0000
21 A H -0.3585
22 C H 0.0000
23 S H 0.0078
24 A H 0.0000
25 S H -0.1893
26 G H -0.3298
27 F H -0.2213
28 T H -0.4965
29 F H 0.0000
30 T H -1.7888
31 D H -2.3014
32 Y H -1.3951
33 Y H 0.0000
34 M H 0.0000
35 S H 0.0000
36 W H 0.0000
37 I H 0.0000
38 R H 0.0000
39 Q H -0.6295
40 T H 0.0000
41 P H -1.1554
42 G H -1.6473
43 K H -2.1411
44 G H -1.3806
45 L H 0.0000
46 Q H -0.6642
47 W H 0.0000
48 L H 0.0000
49 A H 0.0000
50 Y H 0.0000
51 I H 0.0000
52 T H 0.0000
52A K H -2.4438
53 D H -2.8646
54 G H -1.9900
55 S H -1.5727
56 E H -1.9329
57 K H -1.6391
58 K H -1.4142
59 Y H -1.0900
60 A H 0.0000
61 D H -2.4941
62 S H -1.5188
63 L H 0.0000
64 Q H -2.0917
65 G H -1.5735
66 R H -1.2850
67 F H 0.0000
68 A H -0.7239
69 V H 0.0000
70 S H -0.7888
71 R H -1.1471
72 D H -1.4453
73 N H -1.6159
74 A H -0.9761
75 N H -1.6327
76 N H -1.1181
77 L H -0.4028
78 V H 0.0000
79 F H -0.4794
80 L H 0.0000
81 Q H -1.3804
82 L H 0.0000
82A N H -1.2807
82B T H -1.1005
82C V H 0.0000
83 E H -3.1192
84 D H -3.5430
85 D H -3.3573
86 D H 0.0000
87 T H -1.4316
88 G H -0.8260
89 V H -0.0183
90 Y H 0.0000
91 Y H 0.0000
92 C H 0.0000
93 A H 0.0000
94 R H -0.7042
95 D H 0.0000
96 D H -1.0530
97 G H -0.0482
98 Y H 1.0331
99 Y H 0.9385
100 D H -0.7109
100A R H -1.9521
100B S H -1.0700
100C G H -0.3993
100D Y H 0.0000
100E Y H 0.2722
100F G H 0.0000
100G V H 0.0000
100H F H 0.0000
101 D H -0.9328
102 L H -0.5910
103 W H -0.6432
104 G H 0.0000
105 Q H -1.2298
106 G H -0.6970
107 I H -0.3383
108 R H -0.6453
109 V H 0.0000
110 T H 0.0000
111 V H 0.0000
112 S H -1.2231
113 S H -0.8256
114 A H -0.5819
115 S H -0.6821
116 T H -0.7048
117 K H -1.4401
118 G H -1.4857
119 P H 0.0000
120 S H -0.4686
121 V H 0.0000
122 F H 0.0000
123 P H -1.2388
124 L H 0.0000
125 A H -1.2460
126 P H 0.0000
127 S H -0.6998
134 G H -0.6577
135 T H -0.5231
136 A H 0.0000
137 A H 0.0000
138 L H 0.0000
139 G H 0.0000
140 C H 0.0000
141 L H 0.0000
142 V H 0.0000
143 K H 0.0000
144 D H -0.6099
145 Y H 0.0000
146 F H 0.0000
147 P H 0.0000
148 E H -0.5524
149 P H -0.6854
150 V H -0.5777
151 T H -0.4557
152 V H -0.1195
153 S H -0.3389
154 W H 0.0000
155 N H -0.6770
156 S H -0.6457
157 G H -0.4855
158 A H -0.2338
159 L H -0.0138
160 T H -0.1803
161 S H -0.1923
162 G H -0.2147
163 V H 0.1631
164 H H -0.3222
165 T H 0.0192
166 F H 0.0000
167 P H -0.4152
168 A H 0.1197
169 V H 0.3687
170 L H 0.9825
171 Q H 0.1523
172 S H -0.1010
173 S H -0.2549
174 G H -0.0658
175 L H -0.0894
176 Y H 0.0000
177 S H 0.0000
178 L H 0.0000
179 S H 0.0000
180 S H 0.0000
181 V H 0.0000
182 V H 0.0000
183 T H -0.1405
184 V H 0.0000
185 P H -0.6064
186 S H -0.5636
187 S H -0.6002
188 S H -0.5805
189 L H -0.7822
190 G H -1.0709
191 T H -0.6999
192 Q H -1.2086
193 T H -1.0640
194 Y H 0.0000
195 I H -1.1950
196 C H 0.0000
197 N H -1.3714
198 V H 0.0000
199 N H -1.7569
200 H H 0.0000
201 K H -2.7135
202 P H -1.7167
203 S H -1.9319
204 N H -2.5879
205 T H -2.0798
206 K H -2.6361
207 V H -1.5444
208 D H -2.4500
209 K H -2.0768
210 K H -2.2795
211 V H 0.0000
212 E H -2.8419
213 P H -1.9884
214 K H -1.9784
215 S H -0.5624
216 C H -0.0364
217 G H -0.0518
218 R H -0.6098
219 L H 1.5322
220 V H 1.8947
3 L L 0.7172
4 L L 0.0000
5 T L -0.9492
6 Q L 0.0000
7 S L -1.3321
8 P L -1.1864
9 D L -2.1919
10 S L -1.1334
11 L L -0.5383
12 A L -0.5796
13 V L 0.0000
14 T L -1.1864
15 L L -0.4942
16 G L -1.1169
17 E L -2.0812
18 T L -1.1010
19 A L 0.0000
20 T L -0.0997
21 I L 0.0000
22 T L -0.9946
23 C L 0.0000
24 R L -2.5041
25 S L 0.0000
26 S L -1.3881
27 R L -2.5207
27A N L -2.4705
27B I L 0.0000
27C L L -0.9447
27D H L -0.8129
27E S L -0.3310
27F L L 0.5930
28 N L -0.8417
29 N L -1.6028
30 K L -1.3336
31 N L -0.9598
32 Y L 0.0000
33 L L 0.0000
34 A L 0.0000
35 W L 0.0000
36 Y L 0.0000
37 Q L 0.0000
38 Q L -1.1695
39 R L -1.7028
40 P L -1.3995
41 G L -1.4975
42 Q L -2.2085
43 A L -1.5148
44 P L 0.0000
45 K L -1.8741
46 L L 0.0000
47 L L 0.0000
48 V L 0.0000
49 I L 0.4060
50 W L 0.0725
51 A L 0.0000
52 S L -0.1084
53 M L 0.5244
54 R L -0.5986
55 V L -0.0303
56 S L -0.3088
57 G L -0.6904
58 V L -0.5533
59 A L -1.0978
60 D L -2.1303
61 R L -1.3540
62 F L 0.0000
63 S L -0.7657
64 G L -0.4706
65 S L -0.4999
66 G L -0.9716
67 S L -1.2241
68 G L -1.6495
69 T L -2.0504
70 D L -2.1823
71 F L 0.0000
72 A L -0.7128
73 L L 0.0000
74 T L -0.2366
75 I L 0.0000
76 S L -1.1406
77 S L -1.0698
78 L L 0.0000
79 Q L -1.3107
80 P L -1.4109
81 E L -2.1739
82 D L 0.0000
83 A L -0.8209
84 A L 0.0000
85 V L -0.3794
86 Y L 0.0000
87 Y L 0.0000
88 C L 0.0000
89 Q L 0.0000
90 H L 0.1005
91 Y L 0.0000
92 Y L -0.3122
93 T L -0.2449
94 T L -0.4049
95 H L -1.1877
96 R L 0.0000
97 T L -0.0898
98 F L 0.0000
99 G L 0.0000
100 Q L -1.4206
101 G L 0.0000
102 T L 0.0000
103 R L -1.0569
104 V L 0.0000
105 E L 0.0000
106 I L 0.0000
107 R L -1.8606
108 R L -1.3575
109 T L -0.4373
110 V L -0.0502
111 A L -0.1648
112 A L -0.1578
113 P L 0.0000
114 S L -0.0625
115 V L 0.1316
116 F L 0.2681
117 I L 0.2258
118 F L 0.0000
119 P L -0.6603
120 P L -0.7965
121 S L -1.7985
122 D L -2.8890
123 E L -2.8277
124 Q L 0.0000
125 L L -2.1497
126 K L -2.7652
127 S L -1.6908
128 G L -1.1331
129 T L -1.1231
130 A L 0.0000
131 S L 0.0000
132 V L 0.0000
133 V L 0.0000
134 C L 0.0000
135 L L 0.0000
136 L L 0.0000
137 N L 0.0000
138 N L -0.8073
139 F L 0.0000
140 Y L 0.0000
141 P L -1.6570
142 R L -2.5075
143 E L -2.9506
144 A L -2.1937
145 K L -2.4161
146 V L -1.2276
147 Q L -0.7418
148 W L 0.0000
149 K L -0.6289
150 V L 0.0000
151 D L -1.7231
152 N L -1.4872
153 A L -0.2425
154 L L 0.6559
155 Q L -0.1397
156 S L -0.4228
157 G L -0.8990
158 N L -0.7925
159 S L -1.1954
160 Q L -1.5251
161 E L -2.0315
162 S L -1.0911
163 V L -0.8458
164 T L -1.1757
165 E L -2.2298
166 Q L -1.9281
167 D L -2.0216
168 S L -2.0649
169 K L -2.3367
170 D L -1.8846
171 S L -1.9534
172 T L 0.0000
173 Y L 0.0000
174 S L 0.0000
175 L L 0.0000
176 S L 0.0000
177 S L 0.0000
178 T L -0.6965
179 L L 0.0000
180 T L -0.4175
181 L L -0.5944
182 S L -0.9556
183 K L -1.8625
184 A L -1.7414
185 D L -2.4601
186 Y L 0.0000
187 E L -3.1458
188 K L -3.4187
189 H L -2.8440
190 K L -2.5589
191 V L -1.0022
192 Y L 0.0000
193 A L 0.0000
194 C L 0.0000
195 E L -0.7910
196 V L 0.0000
197 T L -1.2786
198 H L 0.0000
199 Q L -1.7459
200 G L -0.5145
201 L L -0.2770
202 S L -0.4658
203 S L -0.4635
204 P L -0.6910
205 V L -0.1059
206 T L -0.4874
207 K L -0.6083
208 S L -0.4278
209 F L -0.7480
210 N L -1.5746
211 R L -2.1179
212 G L -1.9180
213 E L -2.2552
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Laboratory of Theory of Biopolymers 2018