| Chain sequence(s) |
H: QVQLVQSGGGVVKPGASLRRLACSASGFTFTDYYMSWIRQTPGKGLQWLAYITKDGSEKKYADSLQGRFAVSRDNANNLVFLQLNTVEDDDTGVYYCARDDGYYDRSGYYGVFDLWGQGIRVTVSSASTKGPSVFPLAPSGTAALGCLVKDYFPEPVVTVSWNSGALTSGVHTFPAVVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGRLV
L: LLTQSPDSLAVTLGETATITCRSSRNILHSLNNKNYLAWYQQRPGQAPKLLVIWASMRVSGVADRFSGSGSGTDFALTISSLQPEDAAVYYCQHYYTTHRTFGQGTRVEIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:18)
[INFO] Main: Simulation completed successfully. (00:07:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -0.9851 | |
| 2 | V | H | -0.0114 | |
| 3 | Q | H | -0.4373 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.8026 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.5948 | |
| 8 | G | H | -1.0710 | |
| 9 | G | H | -0.8967 | |
| 10 | G | H | -0.3808 | |
| 11 | V | H | -0.0457 | |
| 12 | V | H | 0.0000 | |
| 13 | K | H | -2.2344 | |
| 14 | P | H | -2.0506 | |
| 15 | G | H | -1.6611 | |
| 16 | A | H | -1.1371 | |
| 17 | S | H | -1.2035 | |
| 18 | L | H | -1.2819 | |
| 19 | R | H | -2.2115 | |
| 20 | L | H | 0.0000 | |
| 21 | A | H | -0.3585 | |
| 22 | C | H | 0.0000 | |
| 23 | S | H | 0.0078 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -0.1893 | |
| 26 | G | H | -0.3298 | |
| 27 | F | H | -0.2213 | |
| 28 | T | H | -0.4965 | |
| 29 | F | H | 0.0000 | |
| 30 | T | H | -1.7888 | |
| 31 | D | H | -2.3014 | |
| 32 | Y | H | -1.3951 | |
| 33 | Y | H | 0.0000 | |
| 34 | M | H | 0.0000 | |
| 35 | S | H | 0.0000 | |
| 36 | W | H | 0.0000 | |
| 37 | I | H | 0.0000 | |
| 38 | R | H | 0.0000 | |
| 39 | Q | H | -0.6295 | |
| 40 | T | H | 0.0000 | |
| 41 | P | H | -1.1554 | |
| 42 | G | H | -1.6473 | |
| 43 | K | H | -2.1411 | |
| 44 | G | H | -1.3806 | |
| 45 | L | H | 0.0000 | |
| 46 | Q | H | -0.6642 | |
| 47 | W | H | 0.0000 | |
| 48 | L | H | 0.0000 | |
| 49 | A | H | 0.0000 | |
| 50 | Y | H | 0.0000 | |
| 51 | I | H | 0.0000 | |
| 52 | T | H | 0.0000 | |
| 52A | K | H | -2.4438 | |
| 53 | D | H | -2.8646 | |
| 54 | G | H | -1.9900 | |
| 55 | S | H | -1.5727 | |
| 56 | E | H | -1.9329 | |
| 57 | K | H | -1.6391 | |
| 58 | K | H | -1.4142 | |
| 59 | Y | H | -1.0900 | |
| 60 | A | H | 0.0000 | |
| 61 | D | H | -2.4941 | |
| 62 | S | H | -1.5188 | |
| 63 | L | H | 0.0000 | |
| 64 | Q | H | -2.0917 | |
| 65 | G | H | -1.5735 | |
| 66 | R | H | -1.2850 | |
| 67 | F | H | 0.0000 | |
| 68 | A | H | -0.7239 | |
| 69 | V | H | 0.0000 | |
| 70 | S | H | -0.7888 | |
| 71 | R | H | -1.1471 | |
| 72 | D | H | -1.4453 | |
| 73 | N | H | -1.6159 | |
| 74 | A | H | -0.9761 | |
| 75 | N | H | -1.6327 | |
| 76 | N | H | -1.1181 | |
| 77 | L | H | -0.4028 | |
| 78 | V | H | 0.0000 | |
| 79 | F | H | -0.4794 | |
| 80 | L | H | 0.0000 | |
| 81 | Q | H | -1.3804 | |
| 82 | L | H | 0.0000 | |
| 82A | N | H | -1.2807 | |
| 82B | T | H | -1.1005 | |
| 82C | V | H | 0.0000 | |
| 83 | E | H | -3.1192 | |
| 84 | D | H | -3.5430 | |
| 85 | D | H | -3.3573 | |
| 86 | D | H | 0.0000 | |
| 87 | T | H | -1.4316 | |
| 88 | G | H | -0.8260 | |
| 89 | V | H | -0.0183 | |
| 90 | Y | H | 0.0000 | |
| 91 | Y | H | 0.0000 | |
| 92 | C | H | 0.0000 | |
| 93 | A | H | 0.0000 | |
| 94 | R | H | -0.7042 | |
| 95 | D | H | 0.0000 | |
| 96 | D | H | -1.0530 | |
| 97 | G | H | -0.0482 | |
| 98 | Y | H | 1.0331 | |
| 99 | Y | H | 0.9385 | |
| 100 | D | H | -0.7109 | |
| 100A | R | H | -1.9521 | |
| 100B | S | H | -1.0700 | |
| 100C | G | H | -0.3993 | |
| 100D | Y | H | 0.0000 | |
| 100E | Y | H | 0.2722 | |
| 100F | G | H | 0.0000 | |
| 100G | V | H | 0.0000 | |
| 100H | F | H | 0.0000 | |
| 101 | D | H | -0.9328 | |
| 102 | L | H | -0.5910 | |
| 103 | W | H | -0.6432 | |
| 104 | G | H | 0.0000 | |
| 105 | Q | H | -1.2298 | |
| 106 | G | H | -0.6970 | |
| 107 | I | H | -0.3383 | |
| 108 | R | H | -0.6453 | |
| 109 | V | H | 0.0000 | |
| 110 | T | H | 0.0000 | |
| 111 | V | H | 0.0000 | |
| 112 | S | H | -1.2231 | |
| 113 | S | H | -0.8256 | |
| 114 | A | H | -0.5819 | |
| 115 | S | H | -0.6821 | |
| 116 | T | H | -0.7048 | |
| 117 | K | H | -1.4401 | |
| 118 | G | H | -1.4857 | |
| 119 | P | H | 0.0000 | |
| 120 | S | H | -0.4686 | |
| 121 | V | H | 0.0000 | |
| 122 | F | H | 0.0000 | |
| 123 | P | H | -1.2388 | |
| 124 | L | H | 0.0000 | |
| 125 | A | H | -1.2460 | |
| 126 | P | H | 0.0000 | |
| 127 | S | H | -0.6998 | |
| 134 | G | H | -0.6577 | |
| 135 | T | H | -0.5231 | |
| 136 | A | H | 0.0000 | |
| 137 | A | H | 0.0000 | |
| 138 | L | H | 0.0000 | |
| 139 | G | H | 0.0000 | |
| 140 | C | H | 0.0000 | |
| 141 | L | H | 0.0000 | |
| 142 | V | H | 0.0000 | |
| 143 | K | H | 0.0000 | |
| 144 | D | H | -0.6099 | |
| 145 | Y | H | 0.0000 | |
| 146 | F | H | 0.0000 | |
| 147 | P | H | 0.0000 | |
| 148 | E | H | -0.5524 | |
| 149 | P | H | -0.6854 | |
| 150 | V | H | -0.5777 | |
| 151 | T | H | -0.4557 | |
| 152 | V | H | -0.1195 | |
| 153 | S | H | -0.3389 | |
| 154 | W | H | 0.0000 | |
| 155 | N | H | -0.6770 | |
| 156 | S | H | -0.6457 | |
| 157 | G | H | -0.4855 | |
| 158 | A | H | -0.2338 | |
| 159 | L | H | -0.0138 | |
| 160 | T | H | -0.1803 | |
| 161 | S | H | -0.1923 | |
| 162 | G | H | -0.2147 | |
| 163 | V | H | 0.1631 | |
| 164 | H | H | -0.3222 | |
| 165 | T | H | 0.0192 | |
| 166 | F | H | 0.0000 | |
| 167 | P | H | -0.4152 | |
| 168 | A | H | 0.1197 | |
| 169 | V | H | 0.3687 | |
| 170 | L | H | 0.9825 | |
| 171 | Q | H | 0.1523 | |
| 172 | S | H | -0.1010 | |
| 173 | S | H | -0.2549 | |
| 174 | G | H | -0.0658 | |
| 175 | L | H | -0.0894 | |
| 176 | Y | H | 0.0000 | |
| 177 | S | H | 0.0000 | |
| 178 | L | H | 0.0000 | |
| 179 | S | H | 0.0000 | |
| 180 | S | H | 0.0000 | |
| 181 | V | H | 0.0000 | |
| 182 | V | H | 0.0000 | |
| 183 | T | H | -0.1405 | |
| 184 | V | H | 0.0000 | |
| 185 | P | H | -0.6064 | |
| 186 | S | H | -0.5636 | |
| 187 | S | H | -0.6002 | |
| 188 | S | H | -0.5805 | |
| 189 | L | H | -0.7822 | |
| 190 | G | H | -1.0709 | |
| 191 | T | H | -0.6999 | |
| 192 | Q | H | -1.2086 | |
| 193 | T | H | -1.0640 | |
| 194 | Y | H | 0.0000 | |
| 195 | I | H | -1.1950 | |
| 196 | C | H | 0.0000 | |
| 197 | N | H | -1.3714 | |
| 198 | V | H | 0.0000 | |
| 199 | N | H | -1.7569 | |
| 200 | H | H | 0.0000 | |
| 201 | K | H | -2.7135 | |
| 202 | P | H | -1.7167 | |
| 203 | S | H | -1.9319 | |
| 204 | N | H | -2.5879 | |
| 205 | T | H | -2.0798 | |
| 206 | K | H | -2.6361 | |
| 207 | V | H | -1.5444 | |
| 208 | D | H | -2.4500 | |
| 209 | K | H | -2.0768 | |
| 210 | K | H | -2.2795 | |
| 211 | V | H | 0.0000 | |
| 212 | E | H | -2.8419 | |
| 213 | P | H | -1.9884 | |
| 214 | K | H | -1.9784 | |
| 215 | S | H | -0.5624 | |
| 216 | C | H | -0.0364 | |
| 217 | G | H | -0.0518 | |
| 218 | R | H | -0.6098 | |
| 219 | L | H | 1.5322 | |
| 220 | V | H | 1.8947 | |
| 3 | L | L | 0.7172 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.9492 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -1.3321 | |
| 8 | P | L | -1.1864 | |
| 9 | D | L | -2.1919 | |
| 10 | S | L | -1.1334 | |
| 11 | L | L | -0.5383 | |
| 12 | A | L | -0.5796 | |
| 13 | V | L | 0.0000 | |
| 14 | T | L | -1.1864 | |
| 15 | L | L | -0.4942 | |
| 16 | G | L | -1.1169 | |
| 17 | E | L | -2.0812 | |
| 18 | T | L | -1.1010 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.0997 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.9946 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.5041 | |
| 25 | S | L | 0.0000 | |
| 26 | S | L | -1.3881 | |
| 27 | R | L | -2.5207 | |
| 27A | N | L | -2.4705 | |
| 27B | I | L | 0.0000 | |
| 27C | L | L | -0.9447 | |
| 27D | H | L | -0.8129 | |
| 27E | S | L | -0.3310 | |
| 27F | L | L | 0.5930 | |
| 28 | N | L | -0.8417 | |
| 29 | N | L | -1.6028 | |
| 30 | K | L | -1.3336 | |
| 31 | N | L | -0.9598 | |
| 32 | Y | L | 0.0000 | |
| 33 | L | L | 0.0000 | |
| 34 | A | L | 0.0000 | |
| 35 | W | L | 0.0000 | |
| 36 | Y | L | 0.0000 | |
| 37 | Q | L | 0.0000 | |
| 38 | Q | L | -1.1695 | |
| 39 | R | L | -1.7028 | |
| 40 | P | L | -1.3995 | |
| 41 | G | L | -1.4975 | |
| 42 | Q | L | -2.2085 | |
| 43 | A | L | -1.5148 | |
| 44 | P | L | 0.0000 | |
| 45 | K | L | -1.8741 | |
| 46 | L | L | 0.0000 | |
| 47 | L | L | 0.0000 | |
| 48 | V | L | 0.0000 | |
| 49 | I | L | 0.4060 | |
| 50 | W | L | 0.0725 | |
| 51 | A | L | 0.0000 | |
| 52 | S | L | -0.1084 | |
| 53 | M | L | 0.5244 | |
| 54 | R | L | -0.5986 | |
| 55 | V | L | -0.0303 | |
| 56 | S | L | -0.3088 | |
| 57 | G | L | -0.6904 | |
| 58 | V | L | -0.5533 | |
| 59 | A | L | -1.0978 | |
| 60 | D | L | -2.1303 | |
| 61 | R | L | -1.3540 | |
| 62 | F | L | 0.0000 | |
| 63 | S | L | -0.7657 | |
| 64 | G | L | -0.4706 | |
| 65 | S | L | -0.4999 | |
| 66 | G | L | -0.9716 | |
| 67 | S | L | -1.2241 | |
| 68 | G | L | -1.6495 | |
| 69 | T | L | -2.0504 | |
| 70 | D | L | -2.1823 | |
| 71 | F | L | 0.0000 | |
| 72 | A | L | -0.7128 | |
| 73 | L | L | 0.0000 | |
| 74 | T | L | -0.2366 | |
| 75 | I | L | 0.0000 | |
| 76 | S | L | -1.1406 | |
| 77 | S | L | -1.0698 | |
| 78 | L | L | 0.0000 | |
| 79 | Q | L | -1.3107 | |
| 80 | P | L | -1.4109 | |
| 81 | E | L | -2.1739 | |
| 82 | D | L | 0.0000 | |
| 83 | A | L | -0.8209 | |
| 84 | A | L | 0.0000 | |
| 85 | V | L | -0.3794 | |
| 86 | Y | L | 0.0000 | |
| 87 | Y | L | 0.0000 | |
| 88 | C | L | 0.0000 | |
| 89 | Q | L | 0.0000 | |
| 90 | H | L | 0.1005 | |
| 91 | Y | L | 0.0000 | |
| 92 | Y | L | -0.3122 | |
| 93 | T | L | -0.2449 | |
| 94 | T | L | -0.4049 | |
| 95 | H | L | -1.1877 | |
| 96 | R | L | 0.0000 | |
| 97 | T | L | -0.0898 | |
| 98 | F | L | 0.0000 | |
| 99 | G | L | 0.0000 | |
| 100 | Q | L | -1.4206 | |
| 101 | G | L | 0.0000 | |
| 102 | T | L | 0.0000 | |
| 103 | R | L | -1.0569 | |
| 104 | V | L | 0.0000 | |
| 105 | E | L | 0.0000 | |
| 106 | I | L | 0.0000 | |
| 107 | R | L | -1.8606 | |
| 108 | R | L | -1.3575 | |
| 109 | T | L | -0.4373 | |
| 110 | V | L | -0.0502 | |
| 111 | A | L | -0.1648 | |
| 112 | A | L | -0.1578 | |
| 113 | P | L | 0.0000 | |
| 114 | S | L | -0.0625 | |
| 115 | V | L | 0.1316 | |
| 116 | F | L | 0.2681 | |
| 117 | I | L | 0.2258 | |
| 118 | F | L | 0.0000 | |
| 119 | P | L | -0.6603 | |
| 120 | P | L | -0.7965 | |
| 121 | S | L | -1.7985 | |
| 122 | D | L | -2.8890 | |
| 123 | E | L | -2.8277 | |
| 124 | Q | L | 0.0000 | |
| 125 | L | L | -2.1497 | |
| 126 | K | L | -2.7652 | |
| 127 | S | L | -1.6908 | |
| 128 | G | L | -1.1331 | |
| 129 | T | L | -1.1231 | |
| 130 | A | L | 0.0000 | |
| 131 | S | L | 0.0000 | |
| 132 | V | L | 0.0000 | |
| 133 | V | L | 0.0000 | |
| 134 | C | L | 0.0000 | |
| 135 | L | L | 0.0000 | |
| 136 | L | L | 0.0000 | |
| 137 | N | L | 0.0000 | |
| 138 | N | L | -0.8073 | |
| 139 | F | L | 0.0000 | |
| 140 | Y | L | 0.0000 | |
| 141 | P | L | -1.6570 | |
| 142 | R | L | -2.5075 | |
| 143 | E | L | -2.9506 | |
| 144 | A | L | -2.1937 | |
| 145 | K | L | -2.4161 | |
| 146 | V | L | -1.2276 | |
| 147 | Q | L | -0.7418 | |
| 148 | W | L | 0.0000 | |
| 149 | K | L | -0.6289 | |
| 150 | V | L | 0.0000 | |
| 151 | D | L | -1.7231 | |
| 152 | N | L | -1.4872 | |
| 153 | A | L | -0.2425 | |
| 154 | L | L | 0.6559 | |
| 155 | Q | L | -0.1397 | |
| 156 | S | L | -0.4228 | |
| 157 | G | L | -0.8990 | |
| 158 | N | L | -0.7925 | |
| 159 | S | L | -1.1954 | |
| 160 | Q | L | -1.5251 | |
| 161 | E | L | -2.0315 | |
| 162 | S | L | -1.0911 | |
| 163 | V | L | -0.8458 | |
| 164 | T | L | -1.1757 | |
| 165 | E | L | -2.2298 | |
| 166 | Q | L | -1.9281 | |
| 167 | D | L | -2.0216 | |
| 168 | S | L | -2.0649 | |
| 169 | K | L | -2.3367 | |
| 170 | D | L | -1.8846 | |
| 171 | S | L | -1.9534 | |
| 172 | T | L | 0.0000 | |
| 173 | Y | L | 0.0000 | |
| 174 | S | L | 0.0000 | |
| 175 | L | L | 0.0000 | |
| 176 | S | L | 0.0000 | |
| 177 | S | L | 0.0000 | |
| 178 | T | L | -0.6965 | |
| 179 | L | L | 0.0000 | |
| 180 | T | L | -0.4175 | |
| 181 | L | L | -0.5944 | |
| 182 | S | L | -0.9556 | |
| 183 | K | L | -1.8625 | |
| 184 | A | L | -1.7414 | |
| 185 | D | L | -2.4601 | |
| 186 | Y | L | 0.0000 | |
| 187 | E | L | -3.1458 | |
| 188 | K | L | -3.4187 | |
| 189 | H | L | -2.8440 | |
| 190 | K | L | -2.5589 | |
| 191 | V | L | -1.0022 | |
| 192 | Y | L | 0.0000 | |
| 193 | A | L | 0.0000 | |
| 194 | C | L | 0.0000 | |
| 195 | E | L | -0.7910 | |
| 196 | V | L | 0.0000 | |
| 197 | T | L | -1.2786 | |
| 198 | H | L | 0.0000 | |
| 199 | Q | L | -1.7459 | |
| 200 | G | L | -0.5145 | |
| 201 | L | L | -0.2770 | |
| 202 | S | L | -0.4658 | |
| 203 | S | L | -0.4635 | |
| 204 | P | L | -0.6910 | |
| 205 | V | L | -0.1059 | |
| 206 | T | L | -0.4874 | |
| 207 | K | L | -0.6083 | |
| 208 | S | L | -0.4278 | |
| 209 | F | L | -0.7480 | |
| 210 | N | L | -1.5746 | |
| 211 | R | L | -2.1179 | |
| 212 | G | L | -1.9180 | |
| 213 | E | L | -2.2552 |