Project name: RFC18

Status: done

Started: 2025-07-15 15:42:25
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Chain sequence(s) A: LTTTTTELPTVTADGTNGTATATLTINETVTLSAGDGVVFNLEGTLSENTNSPNSIGKEYTGKLKQTQTRSAGAGGSATVTTTLTLDITVAPYLKATLKASITKYSNK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:55)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:56)
Show buried residues

Minimal score value
-3.043
Maximal score value
0.7066
Average score
-0.8178
Total score value
-88.3246

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L A 0.6997
2 T A 0.0258
3 T A 0.0090
4 T A -0.4486
5 T A -0.5778
6 T A -0.9602
7 E A -1.9959
8 L A -0.9694
9 P A -0.7686
10 T A -0.8569
11 V A -0.0245
12 T A -0.6518
13 A A 0.0000
14 D A -2.4140
15 G A 0.0000
16 T A -1.7418
17 N A -1.6563
18 G A -1.0455
19 T A -0.6941
20 A A -0.8712
21 T A -0.7587
22 A A 0.0000
23 T A -0.6874
24 L A 0.0000
25 T A -0.9108
26 I A 0.0000
27 N A -1.7519
28 E A -1.4380
29 T A -0.7194
30 V A 0.0000
31 T A -0.2560
32 L A 0.0000
33 S A -1.0370
34 A A -1.0968
35 G A -1.0059
36 D A -1.1469
37 G A 0.0000
38 V A 0.0000
39 V A -0.5472
40 F A 0.0000
41 N A -1.6592
42 L A 0.0000
43 E A -3.0430
44 G A 0.0000
45 T A -1.2303
46 L A -0.2495
47 S A -0.9286
48 E A -1.0954
49 N A 0.0000
50 T A -1.2629
51 N A -1.7773
52 S A 0.0000
53 P A -0.9017
54 N A -1.1239
55 S A -0.6759
56 I A 0.7066
57 G A -0.9198
58 K A -2.0027
59 E A -2.1721
60 Y A -0.6242
61 T A -0.8172
62 G A -0.7096
63 K A -1.9633
64 L A -1.5598
65 K A -2.9068
66 Q A -1.9806
67 T A -1.3691
68 Q A -1.2218
69 T A -1.1669
70 R A -1.6896
71 S A -1.2179
72 A A 0.0000
73 G A -0.9516
74 A A -0.5782
75 G A -0.7234
76 G A -0.7233
77 S A -0.5837
78 A A -0.4349
79 T A -0.1805
80 V A -0.1833
81 T A -0.4696
82 T A -0.8981
83 T A -0.7854
84 L A 0.0000
85 T A -0.8095
86 L A 0.0000
87 D A -1.7628
88 I A -0.7897
89 T A -0.6904
90 V A 0.0000
91 A A -0.4778
92 P A -1.0278
93 Y A -0.8264
94 L A -0.8132
95 K A -1.5022
96 A A 0.0000
97 T A -1.0373
98 L A 0.0000
99 K A -2.5388
100 A A 0.0000
101 S A -1.2801
102 I A -0.5807
103 T A -0.4435
104 K A -0.6814
105 Y A -0.2871
106 S A -0.8279
107 N A -1.5978
108 K A -1.9776
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Laboratory of Theory of Biopolymers 2018